Cyprinodon variegatus (sheepshead minnow): 107081855
Help
Entry
107081855 CDS
T06110
Name
(RefSeq) neural cell adhesion molecule 1-like
KO
K06491
neural cell adhesion molecule
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
cvg04514
Cell adhesion molecule (CAM) interaction
cvg04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
107081855
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
107081855
04517 IgSF CAM signaling
107081855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107081855
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvg04515
]
107081855
04090 CD molecules [BR:
cvg04090
]
107081855
00536 Glycosaminoglycan binding proteins [BR:
cvg00536
]
107081855
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cvg00537
]
107081855
04091 Lectins [BR:
cvg04091
]
107081855
Membrane trafficking [BR:
cvg04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
107081855
Cell adhesion molecules [BR:
cvg04515
]
Immunoglobulin superfamily
NCAM1/2
107081855
CD molecules [BR:
cvg04090
]
Proteins
107081855
Glycosaminoglycan binding proteins [BR:
cvg00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
107081855
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cvg00537
]
Others
107081855
Lectins [BR:
cvg04091
]
I-type lectins (Siglecs)
107081855
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
VEGFR1-3_N_Ig-like
C2-set_2
Ig_PDGFR_d4
Pur_ac_phosph_N
V-set_CD47
C2-set_3
Fn3_ROS1
C1-set
Motif
Other DBs
NCBI-GeneID:
107081855
NCBI-ProteinID:
XP_015225669
Ensembl:
ENSCVAG00000000230
LinkDB
All DBs
Position
Unknown
AA seq
1015 aa
AA seq
DB search
MLQIRDILWGLLFTGCAAAIQVQITPSQGEISVGESKFFLCEVVGDAKEIDWFSPTGDKI
LPNRPNISVSSTDEATSVLTIYHATVDNAGTYKCIAKNGDKEAQATVQVKIFQKITFVNA
ASPQEFNEGDSAEIICDVVSSPPPSIIWKHKGVIVDSSKDVRYKFMENGHLVIRGIKKAD
EGTYSCEARVNTRGEIDFRMIKVIVNVLPTIRPRKAEVNATADVGDGVLLACDADGFPEP
TVTWTHNDVVLQMGEKYSLNEDGSELVINDVQKVDEGDYTCIAVNKAGRKAEIVSLNVFV
LPRITYFNNNTASEFDEEVTLTCEASGDPTPTISWRFGDTVFIDGEQASWTRPEKYESLD
RNVVVRSHARVSSLTLKNVQYTDAGHYLCVASNSIGEDNQEVFLEVRYAPKIWGFAVSWT
WEGNPANLSCLVRANPRASVVWYRDGVELPSENSTNIRIFNTHNASHLEITPESQSDFGS
YNCTATNGKGSDSKEFLLVQADVPGSPIIEEVQPFSSTAKVVFKESVSSGGVPVLKYRVE
WRLPGREWKSEEYKAEADMTSVIIDGLKPETTYEVKMSAINGKGEGESSRTSLFKTEPVH
YSLTIASSMPPAIAATSMAIKGEPNAPLLEVMPIKSSNTVKIKWTKQDDGGSPIKHLLVR
YKAKHVSDWKPELKLPPRSEYVILNGLDWNTDYEVHVVAENQRGRSEPSITSFRTATEPT
AIPGSGDAAAGGSGLGTGAIVGILIAVFLLLLVAVDVTCYFLNKCGLLMCIAVNVCGKAG
PGAKSKDIEEGKAAFSSQKHLLPCCYPNTFLFFFWLCASSLISSPPPSPPSCFPCDSLPH
RPAAADSPHPVVNVLPSTAANSVTESLSTPQTNPSDLKPSPKNTTEALSSSPKADPECNV
GPLVDLSDTPKQPPASSPPVLEPVSPPSANADGPQSQCESVKAPNSTQSKDSQVDGSSKD
TSNAPCSDSTSSGQNDGKTVKDENAKAETEVKNATTEVKTVPNEAPQANGNESKA
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagataagggacatcctctggggactgttgttcaccggctgtgcagctgccatt
caggtgcaaatcactccatcgcaaggggaaatcagcgttggagagtccaagtttttcctc
tgcgaagtggtcggggatgcaaaagaaattgactggttttcccctactggtgataagatc
ctcccaaatcggccaaacatctctgtgagttctactgacgaggccacatcggttctcacc
atctaccatgccactgtggacaacgctggtacttacaaatgtatcgcaaaaaatggagac
aaggaggcccaagctacagttcaagttaaaatcttccaaaagatcaccttcgtgaatgca
gcgagtccacaggagttcaacgagggtgacagcgctgaaatcatctgcgatgtggttagc
tcgccgccgccctccatcatttggaaacacaagggcgtcatagtcgattcctccaaagat
gtccgttacaaattcatggaaaatggccacctggtgatacgtggcatcaagaaggctgat
gaaggaacgtattcttgtgaagctcgtgttaataccaggggagaaattgacttccggatg
ataaaggtcatcgttaatgtccttcctacaatccgcccgaggaaagctgaagtcaatgcc
acagcggatgttggggatggtgtcttgctggcctgtgatgcagatggcttccctgagccc
actgttacctggacacataacgatgtcgtccttcaaatgggtgaaaaatacagtttaaac
gaggatggttctgaattggtaataaatgacgtccagaaggtggatgaaggagattatact
tgcattgccgtcaacaaggcaggaaggaaagccgagatcgtcagcctgaacgtgtttgtg
ctgcccagaattacctacttcaacaacaacactgcctctgagtttgatgaggaggtcacc
ctgacctgtgaggcctcgggtgaccccacacccaccatctcctggagatttggagacaca
gttttcattgatggagagcaggcatcttggacacgaccagaaaaatatgagagccttgat
aggaacgttgtggtgcgaagccacgcacgggtatcctccctcaccctgaagaatgtccag
tacacggatgctggtcattatctttgcgttgccagcaactcaattggtgaagacaaccag
gaagtgttcctcgaagtgcgctatgctccaaagatttggggttttgcggtatcttggaca
tgggaaggaaacccagccaacttatcttgtctggtgagggccaaccccagagcctcggtg
gtttggtaccgagacggagtcgagctgccaagtgaaaactcaaccaacatacggatcttc
aacacccataatgccagccatctggagattacacctgagtcccaaagtgactttggaagc
tacaactgcacagcaactaatggaaaaggcagcgattccaaggagttcctcctagtccaa
gcagatgtgccggggtcgcctataatcgaagaagtgcagccgttctccagcacagcaaag
gtggtgttcaaggaatctgtcagcagtggcggagtgccggttttaaagtacagagtggaa
tggcgtctgcctggtagggagtggaaaagtgaggagtacaaagctgaagcagacatgacc
agcgtgatcatcgacggactgaaaccagagactacctacgaggtcaagatgtccgccatc
aacgggaaaggcgagggcgagagcagccgtaccagcctttttaagacggagccagtccac
tattccctcacaattgcatcatcgatgccacctgctattgctgccaccagcatggccatt
aaaggggaaccaaatgctcccttactagaagtcatgcctataaagagcagtaacactgtg
aaaatcaagtggaccaagcaggacgacggtggatctccaattaaacacttgctggtcaga
tacaaggctaagcatgtgtctgactggaaaccagaactgaaacttccccccaggagcgag
tatgtcattctgaacggccttgattggaatacagattacgaggtccatgtggtagcagag
aatcaacggggccgatccgagccatccatcacttccttcagaacagctacagaacccacc
gccatcccaggttctggagatgctgcagccggtggctccggactcggcaccggagcaatt
gtgggaatcctcatcgctgttttcttgttgctactggttgctgtggatgtcacctgctat
tttctcaacaagtgtggactcctcatgtgcatcgctgtaaatgtctgtgggaaggctggc
ccaggtgcaaagagcaaggatatcgaagagggaaaggcagcgttctcgtcacaaaagcac
ttactaccttgttgttaccctaacacttttcttttttttttttggctctgtgcttcctct
ctgatctcctctcctcctccttcacctccttcctgttttccctgtgactccctgccacac
agacctgctgctgcagattccccacaccccgtggtaaacgtactcccctccactgctgct
aactcggttactgagagcttaagcacgccgcagactaacccctctgacttgaagccttct
cctaaaaacaccacagaggccctttccagttccccaaaagctgaccctgaatgcaatgtt
ggacccctggttgacctcagcgacacacccaaacaaccccctgcctccagccctcctgta
ttagagccagttagcccaccctctgccaatgccgacgggccacagagtcagtgtgagtca
gtcaaagctcccaactccacccagagtaaggactcacaagtagacggctcaagcaaggac
accagcaatgccccatgctcagactccacctcatcaggccaaaacgatgggaagacggtg
aaggatgaaaacgccaaagccgagacggaggtgaagaacgccacgactgaggtgaagacg
gttcccaacgaggctcctcaggcaaacggcaacgaaagtaaagcgtaa
DBGET
integrated database retrieval system
