Cyprinodon variegatus (sheepshead minnow): 107081915
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Entry
107081915 CDS
T06110
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107081915 (smc4)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
107081915 (smc4)
Condensin II
107081915 (smc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
HMMR_N
AAA_29
HIP1_clath_bdg
ERM_helical
CCDC113_CCDC96_CC
DUF1482
Motif
Other DBs
NCBI-GeneID:
107081915
NCBI-ProteinID:
XP_015225756
Ensembl:
ENSCVAG00000004889
LinkDB
All DBs
Position
Unknown
AA seq
1311 aa
AA seq
DB search
MWINRRICKFHIMPSKTAKSSTASKREPKGKGLQPRDDSEGELDVPPQESQSNGQEEAPP
TTDPSQGEATEAADNRSLEEILASIPPPPPPAMTNEPGAPRLMITHLVNRNFKSYAGEQI
LGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDKHKDVQSCTV
EVHFQKIIDKEGDDYEVIPNSKFYVSRTANKDNSSYYNINGKRATFKEVGTLLRSHGIDL
DHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIGSCRLKEPIQTLSRRIELLNEQ
RGEKLNRVKLVEKEKNALEGEKNKAVEFLTLENEIFRNKSHLNQYYVHDLQKRVVDKEQE
KQKILEETKELTEKNAKLSEEIEKMNQELKNVEMKQSKINKYIETQKEKFTQLDLQDVEV
REKIKHSKSKNKALQKQLEKDQKKLEEVRGIPASSEQAIAEATARKEDLEKQKAKEEEKL
KEVMESLKEETSGLQQDKEKKEKELMELSKAVNETRSQMDLAQSELDIYLSRHKTALSQL
NAAKQTLQTTSDTLQERRPAIKDLQVQIPLKEQELKKDQEELEQLMKVDNDTRHVVRELR
QKVDEAKSSLSSNRSRGKVLDALMQLKRSGKIPGIYGRLGDLGAIDEKYDVAISSCCGAL
DNIVVDTIDTAQKCVTFLKEQNIGVATFIGLDKMKVWEKNMAPIRTPENSPRLFDMVKVN
DEGVRPAFYFALRDTLVAQDMEQATRMAFQKDKRWRVVTLKGQIIEMAGTMTGGGRVLKG
RMGSSIGTEVSQDELDRMESKLNEKVSKLQGCQERRLQLEENVQRLQPQLREMKNTLEKY
TNSMSSLADQETHLKLQLKELEANVLAAAPDKAKQKQMEKSLEAFKKDFESASNKAGKVE
NEVKRLHNLIVDINSHKLKAQQDKLDKINKELDDCSSIITKAKVAIKTADRNLKKSEESV
SRIQGELEENEKLMTELTEKLKKLEDEAGEIMKACHEAEAALPEVREQYENVSKEIKALQ
QQEHALQEESLNVRLSIEQIDATITKHNSKIKFWQDENAKLSLHTIEDQPAEELRVFPPA
ELEAIPDPNILVNKISTLENQCRQMKPNLGAIAEYMKKEELYLQRVAQLDEITAERDRFK
HAYEDLRKQRLNEFMTGFNMITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPP
KKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVACYIYEQT
KNAQFIIISLRNNMFEIADRLIGIYKTHNTTKSVGINPKTIVFREHDAITA
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgtggataaatagaagaatttgcaaatttcatatcatgccatctaaaacagcaaaaagt
tcaactgcctctaaaagggagccaaaagggaaagggctgcagcctcgggatgactctgag
ggagagctggatgtacccccccaagaaagccagtctaatggccaagaagaggcacccccg
acaactgatccgtctcagggggaagctactgaggcggcagataaccgaagtttggaggag
atcctcgccagcatccctccaccaccgcccccagcaatgaccaatgaaccaggcgctccg
cgcctaatgataacacatttagttaatcgcaattttaagtcatacgcaggggagcagatt
ttggggccttttcataagcgcttttcctgcatcattggtcccaatggaagtggaaagtcc
aatgtgatagattcaatgctctttgtgtttggatacagagctcaaaagatcagatcgaaa
aagctctcagttctgattcacagttctgataagcacaaggatgtgcaaagctgtactgtt
gaagtgcattttcaaaagattattgataaggagggagatgactacgaagtcatacccaac
agcaagttctatgtttccagaactgccaacaaagacaattcctcttactacaatatcaat
ggcaaaagggctacattcaaagaagttggcactttgctcaggagccatggtattgacctg
gaccacaacagatttttgatcttacagggtgaggtggagcagattgccatgatgaagcca
aaaggtcaaacggagcatgatgaggggatgcttgagtacttggaggatattatcggttcg
tgtcgtctcaaagaaccaatccaaacactgtctcgcagaattgagcttctcaatgagcaa
aggggagaaaagctcaatcgtgtaaaactggtagaaaaggagaaaaatgctttagaaggg
gaaaagaataaagcggtagagttcctgactttggaaaatgagatcttccgaaacaagagt
catctcaaccagtactacgttcatgatctgcaaaaacgtgtggtggataaagagcaggaa
aagcagaagatcttggaggaaacaaaggagctgacagaaaaaaatgctaagctatcagag
gagattgaaaaaatgaatcaagagctgaaaaatgtggagatgaaacaaagtaagatcaac
aagtacattgagacccagaaggaaaagttcacccagctggacttgcaggatgttgaagtg
cgtgagaagattaaacactccaagagcaagaacaaggccctgcagaagcagctggaaaaa
gaccagaaaaagctggaggaagttcgaggtataccagctagcagtgagcaagctatcgct
gaagctacagcccgcaaagaagacctggagaagcagaaggcgaaagaagaagaaaaactg
aaagaagtgatggaaagcctgaaggaagagacgagtggattgcagcaagacaaagagaaa
aaagagaaagagctcatggaacttagcaaggcagtaaatgagactcggtctcaaatggac
cttgctcaatccgaactagacatctaccttagccgccataaaacggctctgagtcagctt
aatgcagctaagcagacgctccagacgacctccgatacgctgcaggagcgccgacctgcc
atcaaagacctgcaggtccaaatccccctgaaggagcaggagctaaagaaggaccaggaa
gagttggagcaactcatgaaggtggataatgacaccaggcatgtggtacgagaattacgg
caaaaggtggatgaagccaagagctctctttcctccaatcgcagtcgaggaaaagtattg
gatgctctaatgcaactcaagaggagtggcaaaattccaggcatttacggaagattgggt
gatcttggagcaatagatgagaaatatgatgtggccatctcctcctgctgtggtgccctg
gacaacatagtggtggatacgatcgacaccgctcagaaatgtgtcactttcctcaaagaa
cagaatattggagtagccactttcatcggtcttgacaagatgaaggtatgggagaaaaac
atggctcccatccgcacgccagagaacagcccgcgtctctttgacatggtgaaagttaac
gatgagggcgtcagaccagctttctactttgccctgcgggacaccctggtagctcaagac
atggagcaggcaactagaatggctttccagaaggacaaacgctggagggtggtcacgctg
aagggacagatcattgagatggcaggaacaatgactggaggcgggagagtcttaaaaggc
aggatgggatcttctattggcacagaggtctcccaggatgagcttgaccgtatggagagc
aagctgaatgagaaagtgtcaaagctgcagggctgccaagagagaaggctgcagttggag
gagaatgtccaacgccttcagcctcagctcagagagatgaagaacacactggaaaaatac
accaacagcatgagcagtctggctgaccaggagactcacttaaaacttcagcttaaggag
cttgaagccaacgtgctggcagctgccccagacaaagccaagcagaaacagatggagaag
agcctggaggcattcaagaaagactttgagtcagcctccaataaggccggaaaggtggaa
aacgaggtaaaaagactccacaacttgattgtagacatcaacagccacaaactgaaagcc
cagcaggataaacttgacaagatcaacaaagagttagatgactgctcctcaatcatcacc
aaggccaaagtggccataaagacagctgatcgaaacttgaaaaagtctgaggagagcgtt
tccagaatccaaggggagctggaggagaatgagaagctgatgactgagctcacagaaaaa
ctgaagaaactagaagatgaggccggggagatcatgaaagcctgtcatgaagcagaggca
gctcttcctgaggtgcgggagcagtatgagaacgtctccaaggagataaaggccctgcag
cagcaggagcacgcattgcaagaggagtctctcaacgtccgactttccatcgagcagata
gacgccaccatcacaaagcacaacagcaagatcaagttctggcaggatgagaatgccaag
ctgtcccttcacaccattgaagaccaaccagcagaagagctccgtgtctttccccctgct
gagctggaagcgatcccagatccaaacatccttgtcaacaagattagcacgttggagaac
cagtgcagacagatgaagcccaatctaggagctattgcagagtacatgaagaaggaggag
ctgtacctgcagcgtgtcgcccagctggacgagatcacagcagagagggacaggttcaaa
cacgcctacgaagacctccgtaaacagaggcttaacgagttcatgaccgggttcaacatg
atcaccaacaagttgaaggagaactaccagatgctgacgctgggtggggatgcagagctg
gagctggtggacagcttggatcccttctctgagggaatcatgttcagtgttcgtcctccg
aagaaaagctggaaaaagatctttaacctgtcaggaggagaaaagaccctcagctctctg
gctttggttttcgctcttcatcactataaacccaccccactctacttcatggacgagata
gatgctgctctggacttcaagaacgtctccatcgttgcctgttacatttatgaacaaaca
aagaatgctcagttcatcatcatctcgttgaggaacaacatgtttgagatcgcagatcgc
ctcatcggcatctacaaaacacacaacacaaccaaaagtgtgggaatcaacccaaagacc
attgtgtttagagaacatgatgctataactgcataa
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integrated database retrieval system
