Cyprinodon variegatus (sheepshead minnow): 107082011
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Entry
107082011 CDS
T06110
Symbol
tank
Name
(RefSeq) TRAF family member-associated NF-kappa-B activator
KO
K12650
TRAF family member-associated NF-kappa-B activator
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04140
Autophagy - animal
cvg04621
NOD-like receptor signaling pathway
cvg04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107082011 (tank)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
107082011 (tank)
04622 RIG-I-like receptor signaling pathway
107082011 (tank)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBD
ANG-1
HSBP1
TMF_TATA_bd
CCDC171
DUF1664
Ninein_long_CC
DUF1492
MAD
IFT57
T4SS_LegC2C7
Motif
Other DBs
NCBI-GeneID:
107082011
NCBI-ProteinID:
XP_015225910
Ensembl:
ENSCVAG00000000671
UniProt:
A0A3Q2C8R2
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MERNIGDQLNKAFEAYRQVSIEKDNAQKELKKMKEHYEQYTQELIKQIEDQQRLISDLEA
KLSATRHPSGEMKCERCNHLPKASSSYRKIQCSENMATVTGAPKLTVNNSTDYQDMLVAF
ETIQGKFRQIQDLTAKQKHHLKRFNGSYDASNDQRFSMPIQCTDRTAEAERPFHSTQRPA
VNIPHLPASLASRGASQEDRDLVDSLTKLSVKFPPPADSEYDFLNSAPERNIALSVPRKQ
PLGSPTLPEEEPVELPLPFVYPTSPSHSTSSSPSHESVRGPQQSFWTPELFDLGANQEPP
SSSPIKCAFCPDIVPQNLMTSHLYLHFSPNKEAEK
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggaacattggagaccagctcaacaaagcttttgaagcttatcgccaggtctcc
atcgaaaaagacaatgctcaaaaggaattgaagaaaatgaaggaacattatgagcaatac
actcaagaacttataaagcagatagaagaccagcagcgtttgatttctgatctcgaagct
aagttgtcggcgacaaggcatccctcaggagagatgaaatgtgagcgctgcaaccatctc
cccaaagcgtccagctcttataggaagatacagtgctcggagaatatggccactgttact
ggtgctccaaaattgacagtcaacaacagcactgattatcaggacatgctggtggctttc
gaaacaattcagggcaaattccgacagatccaggacctgacggcgaaacagaaacatcat
ctgaaaaggttcaacggaagttacgatgcttcaaacgaccagcgcttctccatgccgatc
cagtgcacagaccgaactgcagaagcagagaggcctttccattcgacacagaggccagcc
gtaaacatcccccacctgccggcatccttggcgtcccgcggcgccagtcaggaggacagg
gacttggtagactctctcaccaaactcagtgtcaaattcccaccccctgcggacagtgaa
tatgacttcctgaacagtgctccggagaggaacattgccctgtcggtgcctcgaaagcag
cccctcggctcccccacgctgccagaggaggagcccgtggaactgcccttgccttttgtc
taccccacgtccccctcccactctacgtcctcctcaccctcccatgagagcgtgcgggga
ccccagcagtccttctggacccctgaactgtttgacctcggagccaaccaggagcctccg
agcagcagtccgattaaatgtgctttttgtcccgacatagttccccagaacctcatgaca
agccacctctacttacacttctcacccaataaggaagcagagaaatga
DBGET
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