Cyprinodon variegatus (sheepshead minnow): 107082024
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Entry
107082024 CDS
T06110
Name
(RefSeq) globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like
KO
K00722
globoside alpha-N-acetylgalactosaminyltransferase [EC:
2.4.1.88
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg00603
Glycosphingolipid biosynthesis - globo and isoglobo series
cvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
107082024
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cvg01003
]
107082024
Enzymes [BR:
cvg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.88 globoside alpha-N-acetylgalactosaminyltransferase
107082024
Glycosyltransferases [BR:
cvg01003
]
Glycan extension
FORS blood group (Forssman antigen)
107082024
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_6
Motif
Other DBs
NCBI-GeneID:
107082024
NCBI-ProteinID:
XP_015225930
LinkDB
All DBs
Position
Unknown
AA seq
307 aa
AA seq
DB search
MRIFLGENFLVSSDLHLVAAEGLKYQQPSITQGSRTDVVSVTPWLAPIVWEGTFNPTLLD
AVYYKKNISIAATVFAVGKYVMFLRNFLETLDQHFFAGFRVHVYVFTDQPKEVPKVKMAA
GRELIVQPVPSSNRWQEISARRMEIIQKLIEEKIQNKVDYIFCLDVDSKFHDRWGTESLG
GLVAVIHPGYYKNDRSKFPYERRTSSRAYVAPDEGDFYYCGGAFGGLIPEVLQLAKTCRK
NFEDDAKEGIEAAWQEESHLNRYMWINKPSKVLSPEYLWQDFKQREAEIRTIRFSGVVKN
YNDIRPN
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaggatatttttgggcgaaaacttcctcgtgagttccgacctgcacctggtggcagca
gaggggttaaagtaccaacagccaagcatcacacagggcagtcggactgacgttgtgtcg
gtgacaccctggttggctccgatcgtctgggagggaacgttcaacccaactctcctggac
gccgtctactacaagaagaacatcagcatcgctgccactgtgttcgctgttgggaagtac
gtcatgtttctgaggaacttcctggagacgctagatcagcacttcttcgcgggtttcaga
gtgcatgtatacgtcttcaccgaccagccgaaggaggtgccaaaagtgaaaatggctgcc
ggcagagagctgattgtgcaaccggtaccaagttccaatcgctggcaagaaatctccgcc
cgccggatggaaatcatccagaagctaatcgaggagaaaatccaaaacaaagtggattac
atcttctgtctggatgtggactctaagtttcacgatcgctgggggactgaatcactgggt
ggactggtggctgtgatccatccaggttactacaagaacgaccgcagtaagttcccgtat
gagcggcggacctcctccagagcctatgtagcgcctgatgagggtgacttctactactgt
gggggggcattcggaggcctaataccggaagttctccagctcgccaagacctgtcggaag
aactttgaagatgacgccaaggagggcattgaggctgcctggcaggaagagagtcacttg
aacaggtacatgtggataaacaagccaagtaaggttctgtcacctgaatacctgtggcag
gacttcaaacaaagagaagcggaaatacggaccatcaggttctctggggttgtaaagaac
tataacgacatacgacccaactga
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