Cyprinodon variegatus (sheepshead minnow): 107082062
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Entry
107082062 CDS
T06110
Name
(RefSeq) class E basic helix-loop-helix protein 40-like
KO
K03729
class B basic helix-loop-helix protein 2
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107082062
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
107082062
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
DUF5365
YabA
Motif
Other DBs
NCBI-GeneID:
107082062
NCBI-ProteinID:
XP_015226003
Ensembl:
ENSCVAG00000001505
UniProt:
A0A3Q2FCM7
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MERIPSAQPSLSKHQPELSDMQGMDIQMYVYKPRRGIKRGEENKDTYKLPHRLIEKKRRD
RINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTSLLEQQQQKILALQTGVQ
IEQPPVSQEKSEELFRSGFHMCAKEILQYLANHETEGDLNPTRLISHLHQLAAEVLQSPT
RPLTPLSPKPKEVQVYHQRQDHKETPTTLPPKPAEGYGRNCVPVIQRAYAPTGGEQSGSD
TDTDSGYGGELEKTEGRALQGRSDYYSHDSQQKRPLGDRQSSGIKQEDDEPRHKRPRMES
SEDEVLSGGESSMSSSSSGYGSYMSTSPSHPPPPTHPLCMPFYLIPPSAAAYLPMLEKCW
YPGAVPMLYPGMGGSSPTMSGERPPPPQLVMSPRGGSPAPAISQTPMDSPALLQALKQVP
PLSLETKE
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggagcggattccaagcgcgcaaccttccctctccaaacaccagcctgagctatcagac
atgcaggggatggatatccaaatgtatgtttataaacctagaagagggatcaaaaggggt
gaagagaacaaggatacttacaagctgccccacagacttatcgagaagaaaaggcgcgat
cggataaacgaatgcatcgctcagctgaaagatttattacccgaacacctgaaactcact
actctgggccatctggagaaggctgtggttttagagctgacactcaaacatgtaaaggcc
ctcacgtctcttctggagcagcagcagcagaagatcctcgctctgcagactggcgtgcaa
attgagcagccccctgttagccaggagaagtcagaggaactgtttcgctctggtttccac
atgtgtgccaaggagattctccaatatctagcaaatcatgagacagaaggagacttgaat
ccaactcgactgatcagccaccttcaccaactggctgctgaagtgctgcaaagcccaacc
agaccccttacccctctcagtcccaaacctaaagaggttcaagtctaccatcagcgccag
gaccacaaagaaacacccaccaccttaccccctaaacctgctgagggttatgggaggaac
tgcgtcccggttatccagcgagcgtatgctccaactggtggcgagcagagcggcagtgac
acagacacagacagtggctatgggggggagctggagaaaactgaaggcagggcactgcag
ggacgctctgattattacagccatgacagccagcagaaacgaccactgggagacaggcag
agctctggcatcaaacaagaggatgatgagcctcgccacaaacggccccgcatggagtct
tctgaggatgaggtgctctcaggtggagagtcatcaatgtcatcatcctccagtggttat
ggtagttacatgagcacttccccaagccatccgcctccacctacccaccctctctgcatg
ccgttctacctcatccccccctcagctgcagcttacctaccaatgctggagaaatgctgg
tatcctggagctgtgcctatgctctaccctggcatgggaggctcctcacccaccatgtct
ggcgagagaccacccccaccgcaacttgtgatgtctcccagaggaggctctcctgctcca
gccatatctcagacccccatggactcccctgctctccttcaggcactaaagcaggtacca
cccctcagcctggaaaccaaagaatga
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