Cyprinodon variegatus (sheepshead minnow): 107082086
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Entry
107082086 CDS
T06110
Name
(RefSeq) uncharacterized protein LOC107082086
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
107082086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107082086
Enzymes [BR:
cvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107082086
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107082086
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_4
zf-RING_5
zf-rbx1
zf-C3HC4_4
DUF7943
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
107082086
NCBI-ProteinID:
XP_015226035
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MDVGRNSPRDHRTRSEECVVPVAHYWYVSQIYKDEIRRIEKETKVSIMPTVTVAFNTEHE
GGNPSEALYRFADLVQKCLSDSTSSVIPLKFVDPNRWGDALKVINNNDSKLLVTMSSEGM
TVCGPQDCQNVLSSTLNATQKFDSPEEPARSARSQNFNEDKNVLSSTLSATQNSKWALED
SERPASSKDISVDLCPNSSMMMKSLGDAGPSMEENQWRKKNVRTSLRGKDEKRHKEDMVL
PVKQKNPLIKAGGAAQESCLLPVDPFWYMSHIYKEEMKCIERNNKSKITAQVHVTFEAGR
PNEALCEFIELYQSCLAESGSVMIPLKFVDPDQWSDALKVIKKNKDKLLLSMSSDEVIVC
GPKKGQDEFSAVLNAMQKINHPIDHLKPVSVGTSPRMSNVALNASIGQILGERKEGDGKD
DQCYIPVCMSGFTNKEQLKCKHAFCKGCLQRAVQHSGSICPICKDVFGVVKGNQPDGTMS
WKKHNYTSLPGFPGCGFIEISYYIPAGLQTVKYQLILPILRT
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgggaagaaattctcctagagaccatagaacaagatcagaggaatgtgttgtc
ccagtggctcattactggtatgtcagccagatctacaaagatgaaatcagacgcatagag
aaagaaactaaagttagcataatgccaactgttactgtggcatttaacactgaacatgaa
ggtgggaatccaagtgaggctctctacaggtttgcagatctcgtccaaaagtgtttgtct
gattccacttcctcagttattcctctgaagtttgtagatcctaatcggtggggtgatgca
ctgaaagtcattaataacaatgacagcaagcttttagtcaccatgtcctctgagggaatg
acagtctgtgggccacaggattgtcaaaatgttctcagttcaactttaaatgcaacacag
aaatttgactctcctgaagagccagctaggtcagcaagatctcaaaacttcaacgaagat
aaaaatgttctcagttcaaccttgagtgcaacacagaattccaaatgggctttggaagat
tctgaacggccggctagttctaaagacatcagtgttgacctgtgccctaattccagcatg
atgatgaaaagtcttggtgatgcaggaccgtctatggaggagaaccaatggagaaagaag
aacgtcagaacttcattgaggggcaaagatgagaaaaggcacaaggaggacatggtcctc
cctgtcaaacaaaaaaatccccttataaaggctggaggtgcagctcaagaaagttgtctt
ctgccagtggatcccttttggtacatgagccacatctataaggaggaaatgaaatgtatt
gagaggaacaataaaagtaaaatcacagcacaggtccatgtgacatttgaagctggaaga
cccaatgaggctctctgtgagttcatagagctctatcagagctgcttagctgaatcagga
agcgtaatgattcccctcaagtttgtagatccagatcagtggagcgatgcactgaaagtc
atcaagaaaaacaaggataagcttttgctctctatgtcctctgatgaagtcattgtctgt
ggtccaaagaaaggccaagatgaattcagtgcagtccttaatgcaatgcagaagataaac
catcccattgatcatcttaaacctgtatcagttggtacatcacccaggatgagcaacgtg
gccttgaatgcatcaattggacagattttaggggagagaaaagaaggtgacggcaaagat
gaccaatgctatataccggtatgtatgtccggatttactaataaggaacagctgaagtgt
aagcatgcattctgcaaaggctgcctgcaaagggcagtgcagcacagtggatcaatctgt
cctatatgcaaagatgtatttggtgtggtgaagggaaaccaacctgatggaacaatgagt
tggaaaaaacataactatacatccctccctggattcccaggctgtggcttcatagagatc
agctactatatccctgctggattacagacggtaaagtaccagctcatattgcctatatta
agaacctaa
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