Cyprinodon variegatus (sheepshead minnow): 107082109
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Entry
107082109 CDS
T06110
Name
(RefSeq) retinoic acid receptor gamma-like isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107082109
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cvg03310
]
107082109
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
107082109
Nuclear receptors [BR:
cvg03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
107082109
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
107082109
NCBI-ProteinID:
XP_015226090
Ensembl:
ENSCVAG00000001661
UniProt:
A0A3Q2C7U2
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MNKQPNFFTMASNREHQMRHMTGFSRAMYPFAFNSMRGHSPFDLLASSHLFGRFGADLPK
EMAALSVETQSTSSEEMVPSSPSPPPPPRVYKPCFVCQDKSSGYHYGVSSCEGCKGFFRR
SIQKNMVYTCHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDMKEEVV
LPENYELSGELEELVNKVSKAHQETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELST
KCIIKIVEFAKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLN
RTQMHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQE
PLLEALKIYTRRRRPNKPHMFPRMLMKVTDLRGISTKGAERAVTLKTEIPGPMPPLIREM
LENPDAFEDSSDSSDSASAPPPAIQAIKQEGKSTYESAFEEEEEEEEDEYWEEEREWGAE
SDGELWGEAAQKKAVVGKTQ
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacagcccaactttttcacaatggcatccaacagagagcaccaaatgcgtcac
atgacgggattctctcgtgccatgtacccctttgccttcaactccatgaggggccactcc
ccctttgacctgctggccagcagtcacctttttggacgctttggagcggaccttccaaaa
gagatggctgctttgtcggtggagactcagagcaccagttcagaggagatggtgcccagc
tcaccctcccctcctccccctcctcgggtctacaagccctgctttgtgtgccaggacaag
tcatctggttatcactacggagtgagctcctgtgagggctgcaaggggtttttcagacgg
agtatccagaaaaacatggtgtacacctgccatcgagacaagaactgtcagattaacaaa
gtgacacgtaatcgctgccagtactgtcggctgcagaagtgctttgaggtcggcatgtcc
aaagaagccgtacgtaatgacaggaacaagaagaagaaggacatgaaggaggaggtggtg
ctgcctgagaactatgagctgagcggagaactggaggagcttgttaacaaagtcagcaaa
gctcaccaagagaccttcccatctctgtgccagctgggaaaatacaccacaaactccagc
gctgaccacagagtgcagctggacttgggcctgtgggataagttcagtgagctttccact
aagtgcattataaagattgtggagtttgccaagcgactaccaggcttcactacgctcacc
atcgctgaccagatcaccctcctcaaatctgcatgtctggacattctgatgctacggata
tgcacccgctacactccagagcaggacaccatgaccttctcagacggcctgactctcaac
aggacccagatgcacaacgccggctttgggcccctcacagacctggtgtttgccttcgca
ggtcagctgctgcctttggagatggacgacacagagacggggctcctcagcgcaatctgt
ctcatttgtggagaccgtatggacttggaggaaccagagaaggtcgacaaacttcaggag
ccgctgctggaggctctaaagatctacactcgccgcagacgccccaacaagcctcacatg
ttccctcgcatgctgatgaaagtcacagacctccgaggaatcagcaccaagggtgcagaa
cgagccgttaccctcaaaacagagatcccaggccccatgccccctctgatcagggagatg
ctggagaacccggacgccttcgaggacagcagcgactccagcgacagcgcctcggcgcct
ccccctgccatccaggccatcaagcaagaggggaagtccacttacgagtccgccttcgaa
gaggaagaggaggaggaggaggacgaatattgggaggaggagagggagtggggggcggaa
agtgacggagagctgtggggggaggccgcacagaagaaagccgtggtgggaaaaacgcag
tga
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integrated database retrieval system
