Cyprinodon variegatus (sheepshead minnow): 107082195
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Entry
107082195 CDS
T06110
Symbol
emg1
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107082195 (emg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvg03009
]
107082195 (emg1)
Enzymes [BR:
cvg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
107082195 (emg1)
Ribosome biogenesis [BR:
cvg03009
]
Eukaryotic type
90S particles
Other 90S particles
107082195 (emg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
107082195
NCBI-ProteinID:
XP_015226222
Ensembl:
ENSCVAG00000001164
UniProt:
A0A3Q2DLB4
LinkDB
All DBs
Position
Unknown
AA seq
236 aa
AA seq
DB search
MDSGRKRGLEHLDEYEPKAAKTGKISLHDRMAERRLIVILEGASLETVKVGKTFELLNCD
QHKNMIIKSGRDPGHIRPDITHQCLLMLMDSPLNRAGLLQVYIHTEKNALIEINPQTRIP
RTFNRFCGLMVQLLHKLSVRASDGPQKLLKMIKNPVSDHLPPGCPRIATSFSAGEAVNAR
TVVPEGPAAVVIGAFAHGSVKVDYTEKSVSISNYPLSAALTCAKICSAFEEVWGVL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggactcagggaggaagcgtggtcttgaacatttggacgagtatgaaccaaaagcagca
aaaacaggcaaaattagcctccatgatcggatggctgagaggaggctcattgttattctg
gaaggagcatcgttagagactgtgaaggttggaaaaacgtttgagttgttgaactgcgac
cagcacaaaaacatgatcatcaaaagtggaagagacccgggacacattaggccagatatc
acacatcagtgtctgctcatgctgatggacagcccgctgaacagagcaggccttttgcag
gtttatatccacacagagaaaaacgccttaatagagatcaacccacagacccgcatccca
agaacgttcaatcgcttctgtggcttaatggttcagctgctgcacaagctgagcgtcaga
gcctcggatggtcctcagaaactgttgaagatgattaaaaatccagtgtctgaccacctg
cctcctggatgcccccgcatcgccacctccttctctgccggtgaggctgttaatgctcgg
actgtggtgccagaaggccctgcggcggtggtgatcggagcatttgcacatggctcggtg
aaagtggactacacagagaagagtgtctccattagtaactacccactctctgcagcgctg
acctgtgccaaaatctgctccgcctttgaggaggtgtggggtgtcctgtga
DBGET
integrated database retrieval system
