KEGG   Cyprinodon variegatus (sheepshead minnow): 107082222
Entry
107082222         CDS       T06110                                 
Symbol
atg12
Name
(RefSeq) ubiquitin-like protein ATG12
  KO
K08336  ubiquitin-like protein ATG12
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04068  FoxO signaling pathway
cvg04136  Autophagy - other
cvg04140  Autophagy - animal
cvg04621  NOD-like receptor signaling pathway
cvg04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    107082222 (atg12)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    107082222 (atg12)
   04136 Autophagy - other
    107082222 (atg12)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    107082222 (atg12)
   04622 RIG-I-like receptor signaling pathway
    107082222 (atg12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cvg04131]
    107082222 (atg12)
   04121 Ubiquitin system [BR:cvg04121]
    107082222 (atg12)
   03029 Mitochondrial biogenesis [BR:cvg03029]
    107082222 (atg12)
Membrane trafficking [BR:cvg04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    107082222 (atg12)
Ubiquitin system [BR:cvg04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   107082222 (atg12)
Mitochondrial biogenesis [BR:cvg03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    107082222 (atg12)
SSDB
Motif
Pfam: APG12 ATG8 XendoU
Other DBs
NCBI-GeneID: 107082222
NCBI-ProteinID: XP_015226261
Ensembl: ENSCVAG00000001242
UniProt: A0A3Q2FC98
LinkDB
Position
Unknown
AA seq 117 aa
MSDNAESPTETQKEELQSPSESSATSEEKKKIDVLLKAVGDTPIMKTKKWAVDRGRTVQS
LAQFISRFLKLDANEQLFIYVHQSFAPSPDQEVGVLFDCFGSDGKLVLHYCKSQAWG
NT seq 354 nt   +upstreamnt  +downstreamnt
atgtctgacaatgcagagtctccaacagagacacaaaaagaagagctacagtcaccgtca
gagagttccgcgactagtgaagagaagaaaaaaattgatgtattgctgaaggctgtggga
gacactcctataatgaaaacaaagaagtgggcagtggacagagggaggacagtgcagtct
ctggctcagttcatttctcgcttcctcaaactcgatgccaatgaacaactgtttatttat
gtccaccagtcgtttgcaccatcaccagatcaagaagtgggtgtcctctttgattgtttc
ggcagcgatgggaagctcgttctacattactgtaaatctcaagcctggggttaa

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