Cyprinodon variegatus (sheepshead minnow): 107082257
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Entry
107082257 CDS
T06110
Symbol
vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
107082257 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cvg01007
]
107082257 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cvg03016
]
107082257 (vars2)
Enzymes [BR:
cvg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
107082257 (vars2)
Amino acid related enzymes [BR:
cvg01007
]
Aminoacyl-tRNA synthetase
Class I (U)
107082257 (vars2)
Transfer RNA biogenesis [BR:
cvg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
107082257 (vars2)
Prokaryotic type
107082257 (vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
GST_C_2
Arc1p_N_like
GST_C_3
tRNA-synt_1e
Jag_N
Motif
Other DBs
NCBI-GeneID:
107082257
NCBI-ProteinID:
XP_015226326
Ensembl:
ENSCVAG00000022398
UniProt:
A0A3Q2DI65
LinkDB
All DBs
Position
Unknown
AA seq
1276 aa
AA seq
DB search
MATLYVSPHPDDFRSLLSLIAAEFCPSSRPRVITEDPPASLNARSRPALVLAAAGDGDSV
LSGASAVAWYLAFQGKRAGLDSKQQSQVWQWLSFADNELTPVSCAVVFPLMGVMGVDKKL
QQSSRAELMRVLKVLDQALAPRTYLVGESLTLADMAVATSVLLPFKYALEPSDRKAVTNV
TRWFTTCINQPQFLKVLGEIALCEKVGPVTPSPSAAGKATNAGAAVDSNSSTINGPPKTE
AQLKKEAKKREKLEKFQQKKEMEAKKKTQPPAEKKAKPEKKELGVITYNIPTNPGEKKDV
ISALPDSYSPQYVEAAWYPWWEKQGFFKPEYGRKSISEPNPRGIFMMCIPPPNVTGSLHL
GHALTNAIQDCLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLKRERGLSRHDLGRDNF
IQEVWKWKNEKGDRIYHQLKKLGSSLDWDRACFTMDQKLSYAVQEAFIRMHDEGVIYRSK
RLVNWSCTLNSAISDIEVDKKELSGRTLLPVPGYKEKVEFGVLVSFAYKVDGSDEEVIVA
TTRIETMLGDTAVAVHPADPRYQHLKGKMVLHPFCERKMPIVFDDFVDMNFGTGAVKITP
AHDHNDYEVGERHSLAFINILDENGLLINVPPPFLGMKRFEARTAVLQALKDRGQFKEIK
DNPMVVPVCSRSKDIVEPLLKPQWYVNCRDMGKEAADAVREGRLKIIPDHHLKTWFNWMD
NIRDWCISRQLWWGHRIPAYFVTVNDPAVKPGEDMDGHYWVSGRSEEEAKDKAAKRFNVS
VDKISLRQDEDVLDTWFSSGIFPFSIFGWPNETQDLNVFYPGTLLETGHDILFFWVARMV
MMGLKLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEGLHAQLMDSNL
DPVEVEKAKQGQKSDYPNGIPECGTDALRFALCAYTSQGRDINLDVNRILGYRHFCNKLW
NAVKFAMKTLGENFVPSEMAQLSGEESVSDRWILSRLSAAVALCEAGFKAYDFPGITTSI
YNFWLYELCDVYLESVKPVFIKADEDSAAQRQAEVCRQTLYTCLDVGLRLLSPIMPFVTE
ELYQRLPRRKPQTDPPSICVTSYPDTAEFSWNSEEVDRDMEFSMTVVKTIRSLRADYNLT
KTRADCYLQCIDAATVSLVQKYNLQIQTLSYSQAVIPLTANQPVPEGCAVAIASDRCTVN
LMLKGLIDVEKEVTKLMTKKGDLEKQMEKLREKMAKSDYKEKVPAKVQEQDAEKLRQSQT
ELEKVKEAIENFKKMM
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggccactctctatgtgtcccctcaccccgacgacttcagaagtctcctgagtcttatt
gctgcggagttctgtccatcatctcgtcctcgagtcatcacagaggatccaccagcttcc
cttaatgcccgctccagaccagctctggttctagctgctgctggggatggggactctgtc
ctgagcggggccagtgccgttgcatggtacctggcttttcaggggaagagggctgggctg
gactcaaagcagcagagccaagtgtggcagtggctcagctttgcagacaatgagctcacc
ccagtttcctgtgctgttgtcttcccgttgatgggagtgatgggtgtggataaaaagctc
cagcagagttcccgggcagaacttatgcgggttctaaaggttctcgatcaggccttggcg
ccaagaacctacctggtgggggagagcctaactctggctgatatggctgtagctacatct
gttcttctacctttcaaatatgcgttagagccttcagacaggaaggcagtgaccaacgtg
acgaggtggttcacaacctgcattaaccagccacagttcctgaaggtgctgggagagatc
gctctctgtgagaaggtgggaccagtaacaccttcaccaagtgctgctggaaaagctacc
aacgctggtgcagctgtggactccaacagctccacaattaatggtccaccaaagacggag
gcgcagctgaaaaaggaagcaaagaagagggaaaaactggaaaagtttcaacagaagaag
gaaatggaggcaaagaaaaagacgcagcctccagcagagaaaaaggcaaaacctgagaag
aaagaacttggagtgattacatataacattcctacaaaccctggagaaaaaaaagacgtc
atcagtgctcttccagactcctacagccctcagtatgtggaggctgcttggtatccatgg
tgggagaagcagggctttttcaaaccggagtatggtaggaaaagtatcagtgagccaaac
cctcgtgggatcttcatgatgtgcatccctcctccaaacgtgacaggatctctccatctg
ggtcacgctctcaccaatgccattcaggattgtctgaccagatggcacaggatgcggggg
gaaaccaccctgtggaacccgggctgcgaccatgctggcatcgcaacacaagtggtggtg
gagaagaagctgaagagggagaggggtctgagccgccatgatctgggcagggacaacttc
atccaggaagtttggaaatggaagaacgagaagggagaccgtatttaccaccagctgaag
aagctggggtcctctctggactgggatagagcgtgctttaccatggatcagaagctgtcc
tacgcggtgcaggaagccttcatccgtatgcacgatgagggggtgatttacagaagcaag
cggctcgtcaactggtcctgcaccctgaactccgccatatctgacatagaggtggataag
aaggagctcagcggcagaactctgctccctgtgcctggctacaaggaaaaagtagagttc
ggagtcttggtgtcctttgcttacaaggtggatggatcagatgaggaggtgatcgtggcc
acgacccgtattgagacgatgttgggagacacggctgtggctgtccacccggcggacccc
agataccagcatctgaaggggaaaatggtgctgcatcccttctgtgagcgcaagatgcca
attgtctttgacgactttgtggacatgaattttggaacaggtgctgtcaaaatcacccca
gctcatgaccataatgactacgaggtcggagagaggcacagtctggccttcatcaacatc
ttggatgaaaatgggcttctcattaatgtgcctcctcccttcctgggcatgaagcgtttt
gaggccagaacagccgtccttcaggcgctcaaggacagaggccagtttaaagagatcaaa
gacaaccccatggttgttccagtctgcagccgttcaaaggacattgtagagccgctgctt
aagcctcagtggtacgtgaattgcagagatatgggcaaagaggctgcagacgctgtgaga
gaaggcagactcaagatcatccccgatcaccacctgaagacttggttcaactggatggac
aacattagggactggtgtatttcccggcagctgtggtggggtcaccgtattcctgcctat
ttcgttactgtaaacgatcctgctgtaaaacctggtgaggacatggatggtcattactgg
gtgagtggcagatcagaagaggaggccaaagataaagcagcaaaacgcttcaacgtgtct
gtggataaaatttctctcagacaggatgaggacgttctggacacttggttctcgtctggc
attttccccttctctattttcggatggcctaatgagacccaggacctgaatgtgttctac
cccggcaccttgctggagacaggtcacgacatcctgttcttctgggtggcccgcatggtg
atgatgggtctcaaactgacgggcaaattgcctttcaaagaggtctatctgcacgctgtg
gtgcgggacgctcatggaaggaagatgagcaagtcgctggggaacgtcattgacccgctg
gacgtcattacagggatctctctagagggtcttcacgcccagctgatggacagtaacctg
gatcctgtagaggtggagaaggcaaagcaaggtcagaagtcggactatccaaacggcatc
ccagagtgtgggactgatgctctccggtttgctttgtgtgcctacaccagccaaggaagg
gacataaacctggatgtaaaccgcatcctgggctaccgtcatttctgcaacaagctttgg
aatgctgtgaagtttgctatgaaaacgcttggagaaaactttgttccatcagagatggcc
cagctgtcaggagaggagagcgtgtcggaccggtggatcctgtccagactgagtgctgct
gtggctctctgtgaagctggcttcaaggcctacgactttcctggcatcaccacgtccatc
tataacttttggctctatgagctttgtgatgtctacctggaaagtgtgaaaccagtgttt
attaaagcggatgaagacagcgccgcccagaggcaagccgaagtgtgcaggcagacactt
tacacctgtttagacgtgggtttgcgacttctttcccccataatgccgttcgtcactgaa
gaactctaccagagattacctagacgaaaacctcaaactgatccgcccagcatctgtgtg
acgtcctacccggacacagcggagttttcctggaacagcgaggaggtcgaccgtgatatg
gagttcagcatgactgtggtcaagacgatccgatctctcagggccgactacaacctgaca
aagaccagagccgactgctacctccagtgcatagatgctgcaaccgtgtctctggtgcag
aaatacaacctgcagattcagaccttgtcttattctcaggccgtcatccctctgacagcc
aaccagccggtcccagaaggctgcgctgtggctatcgcctctgacagatgtactgtcaac
cttatgctcaagggcctcatcgatgtagagaaggaagtgactaagctgatgacaaagaaa
ggcgacttggagaagcagatggagaaactgagagagaagatggcaaagagtgattacaag
gagaaggtgccagcaaaggttcaggagcaggatgctgagaagctacgccagagccaaaca
gagcttgagaaagtgaaagaagccatagaaaacttcaagaaaatgatgtaa
DBGET
integrated database retrieval system
