Cyprinodon variegatus (sheepshead minnow): 107082275
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Entry
107082275 CDS
T06110
Name
(RefSeq) fibrinogen alpha chain-like
KO
K03903
fibrinogen alpha chain
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
107082275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvg04147
]
107082275
00536 Glycosaminoglycan binding proteins [BR:
cvg00536
]
107082275
Exosome [BR:
cvg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107082275
Glycosaminoglycan binding proteins [BR:
cvg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107082275
Hyaluronan
Extracellular matrix or blood plasma proteins
107082275
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fibrinogen_C
Fib_alpha
DUF4407
Motif
Other DBs
NCBI-GeneID:
107082275
NCBI-ProteinID:
XP_015226361
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MKRLSLLLCLTAMAAAQRPVEHATRDEKCATQKEWPFCTDDDWNSKCPSGCRIQGLIDKQ
DHLLLKKIQKIRNLLDQHKAKHRSIDQVSKQTYDVLREKLTLDSGNDNLYYDLAQNLRQR
ITEMKVRIDTQQKTLAALRDRVKDQVAEMLKIEVDIDMKLRSCKGSCAIHTNYQVDRESY
VGLDKQINQLESYETQSLQSVGTMYVMKSRPLKDVIVDSRFKSKDVAAQQTEDMFPQVNT
VQFVLEEEGSSSSPATISKGPGTSHSSSSSSFSSSATSTSPSSAKSITELSGRGDGNFFG
GFEGSQSQPSISHSSTKTVSCTKTVRRTIIQTPNGPVERVEEVGSGPECEGVGGFTKGEM
GSLFPSFAGSSSSSFSAIHSGGTKGSLLADSKSGLDPFGADFGAFLTDNSDDDVPDFHAR
SVKSTVVERQQDFVGTDCVDLYQKHLNGETNGLFKIKPAGSTATVEVYCHQEGIMGGWLL
VQQRESGAISFNRTWAEYRNGFGSVDAQGKGEFWLGNQNLHLLTKQQETMMKVELEDWEG
GVATAEYTVRVGAEEDGFPLQVSGYTGDAGDALGPHNGMKFSTLDRDNDGWGESCAEAYG
GGWWYNSCQTANLNGVYYKGSYEPHTQSPYKTANGVVWGTFKPDTYSLKAARVFIRPAAF
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggctcagcttactcctctgtttgactgctatggccgcagcgcagcgtcccgtg
gagcacgccaccagggatgaaaaatgtgccacccagaaggagtggcctttttgcacagac
gatgactggaactctaagtgcccgtccggctgcaggatccagggtctgatagataaacag
gatcatctgctgctaaagaagatccagaagatccgtaacctgctggatcagcacaaggcc
aagcatcgttccatcgaccaagtgtccaagcagacctacgacgtcctgagggagaaactc
acccttgattctggaaacgacaacctgtattatgacctggcccagaatctgcgtcagagg
atcaccgaaatgaaggttcggatcgacacacagcagaagaccctggccgccctgagggac
agggtcaaagaccaggttgccgagatgctgaaaatagaggttgatattgacatgaagctg
cgctcctgcaaaggctcctgtgccattcacacaaactaccaggtggatagagagagttat
gtgggtctggataaacagatcaatcagctggagtcctatgaaacccaaagcctccagtca
gtggggaccatgtatgtgatgaagagccggcctctgaaggatgtgattgttgactccagg
ttcaagtctaaggatgtggcagctcaacagaccgaggacatgttccctcaggtaaacact
gttcagtttgtcttagaggaggaaggctccagttcatctccagccactatctccaagggc
ccaggtacatcacactcatcgtcgtcctcctcattctcttcctcggcaacctccacctcc
ccgtcctctgctaaatccatcactgaactctcaggacgtggagacggcaattttttcggc
gggtttgaagggtcacaaagccagcccagcattagccattcaagcaccaaaacggtcagc
tgtacaaagaccgtcaggaggaccatcatccaaacacctaatgggccggttgaaagagtg
gaggaagtgggtagtggaccagaatgtgagggagtcggtggttttacaaagggggagatg
ggctctttgttcccatcattcgctggctcctcctcctcctccttctctgcaattcattct
ggtggaacaaagggaagcctcctggcagattctaaatccggcctggatccatttggagct
gacttcggcgcgttcttgaccgacaactccgacgacgatgttcctgacttccacgctcgg
agtgtgaagagcacggttgtcgaaaggcaacaggattttgtaggaacagactgcgtcgac
ctctaccagaagcacctgaacggggaaacgaacggcctttttaagatcaaacccgccggc
tccacggcaaccgtggaggtttactgccaccaggaggggataatgggtgggtggttgtta
gtccagcagagagagagcggcgccatcagcttcaaccgcacctgggccgagtaccgcaac
gggttcggctcggtggacgctcaggggaaaggagagttctggctgggcaaccagaacctc
cacctgctgacaaagcagcaggaaaccatgatgaaggtggagctggaggactgggagggg
ggcgtggctaccgcggagtacacggtcagggtcggcgccgaggaggacgggttccccctg
caggtatccgggtacaccggagacgccggggacgccctgggaccccacaacggtatgaaa
ttcagcaccttggacagagacaatgacgggtggggggagagctgcgcggaggcgtacggg
ggcggatggtggtacaacagctgccagacggccaaccttaacggggtttattacaaaggt
tcatacgagccacacactcagtcaccgtataaaactgccaacggcgtggtgtgggggaca
tttaaaccggacacctacagcctgaaggcggctcgggttttcatccgacccgccgctttc
tga
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