Cyprinodon variegatus (sheepshead minnow): 107082308
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Entry
107082308 CDS
T06110
Name
(RefSeq) rab11 family-interacting protein 1-like isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107082308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107082308
Membrane trafficking [BR:
cvg04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
107082308
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
107082308
NCBI-ProteinID:
XP_015226394
Ensembl:
ENSCVAG00000020491
UniProt:
A0A3Q2EHM0
LinkDB
All DBs
Position
Unknown
AA seq
1213 aa
AA seq
DB search
MSLLDQSQQWFPTSVVVTVHQARNLRIKGKNGTNDSYAIIQVAKDKFSTSVAEKCVAPVW
KEEASFDLPLFHPGNAERCTLYIIVMHRAQVGLDKFLGQAVINLLELHDNKSRKKTDWYK
LVDKSGKEDKVRGEVLLDIQFMRNNMSASMFDLSMEDKPRSRISKLKDKVRGKKKEGPSD
SVSAIVPPVSQVLTDSEGEADAQSLNQTSVGKKKPKIKNPFASKSNLQRNISQSMSTLGT
LPEKNSSLSASRSSGLNIDSSEGKKKFKLLGHKRTGSSDSKVSLGGFSLLGRSKQSNSEL
NNLCINGSHVYTEEPEAKTGSTLSLNSSGLGSVEDIHKHTSDASADTNKGTQAPLYGNTS
TDKTLQAQQHHQEEENRRQAEEKRIAEAKRLEEEEKYKVEARRLQEEEQRRQQEEQERRR
RYLEDEARRKKQEEEEERRRLEAAENQRLEEERRKGEEHKHQEEASMTERLTSLFGMIRK
KEEKKDDVHQQTKEEQPPVAAPRTESVSHNTNPFQDIPVHSDPPAATNQSPSDPLKFSRN
PQTPSSTVFQNRTAKVSAVKPRLPQILESEPADYQSTSQPCPSPNQSEATLSSISLESPD
TFSSLHSSVAPANARQSPSGSPRGSTEDLSIVNSEGSFDTMADQRRRSPLPPLYSGHRTH
SGRDQVPVREFKNPAYVEDDDSQQRKVSPPLPDYNTLFPQKRHGVQGETRWDNLVSEFSK
KHGDCTPELMGPEMSVDGPVDQTRSRFHEMQENPDIRKHQETKPVSTKKFAAPAPPRHSA
SQVPPSAVESGQRHGQKVTPHSLLRSLSPTSKTTTTASSRTSKDEERKEPHSSAAATPTS
RPPSRSAADTAPLDDQRKPQVSSNKEAPTAKPRQRVSGTEPAKQKESAVKPSVQTSSLNM
SSMNKKERENFANFLQYSNSERLSQDSRGKLKPDQESGNVRREQTDNSDNGFNQEKQADT
LANLNGNDSVKQAQSRKKDEHSNPGSPAFQRRNSSRRKIPLPSIRSENIFTSQQEPESKE
PTASTTTSQVVSARGGSKAFAPAQPESDLKPENGLYGEEDPSQSAFPSSQPLSVVLEEPG
KPLLKAWVSPSEAQPVSTQSNNGGGLGLSPRRPHPVKPMSSSDSQSTSSPAAKEIKVWDT
TPGKIKLEDSVGSGPYSQLTTEELIKLVVKQQTDLSKKDAKITELEEYIDNLLVRVIEEK
PTILQSLTVTKPV
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgctcgaccagagccagcagtggtttccaacgagtgtcgtggtaacggttcat
caggctcggaacctgcgtatcaaggggaaaaatggcaccaatgactcgtacgccatcatc
caggtggccaaagacaagttctccacctcggtggcggagaagtgtgtcgctccggtgtgg
aaggaggaggcttcgtttgacctgccgctcttccacccgggaaacgccgagcgctgcacc
ctgtacatcatcgtcatgcaccgggcccaggtgggactggacaagttcctgggccaggct
gtgataaacctgctggaactgcacgacaataagtcccgcaaaaagacagactggtacaag
ctggtggacaagtctggaaaggaggacaaggtgcgaggggaggtgctcctagatatccag
ttcatgagaaacaacatgtcagccagcatgtttgacctttcgatggaggacaagccgcgc
tctcgcatctctaagctgaaggacaaagtccgtggaaaaaagaaggagggcccctctgac
tcggtgtctgccatcgtcccccctgtcagccaggtgctcacagacagcgagggggaagct
gatgcacagtcgcttaatcagacctctgttggaaagaagaaacctaaaataaagaatccc
ttcgcctctaaatcaaacttgcagcgtaacatctcccagtccatgtccacactcgggacc
ctccctgaaaagaactcgtccctctctgccagccgctcgtctggcctcaatatcgattcc
tctgaaggaaaaaagaaattcaaactcctaggacacaagcgaacaggcagctctgacagc
aaggtttctctgggtggtttctctttactgggccgctccaagcagagcaacagtgagctg
aacaacctgtgcatcaacggcagccatgtctacactgaggaaccagaagctaaaactgga
tctactctcagtctgaacagctcaggcctaggctcggtggaggatatccacaaacacaca
tctgatgcctctgcagataccaataaaggcacacaagcacccttatatggtaacacatcc
acagataaaactctacaggcgcaacagcaccatcaagaggaggagaatagaaggcaggca
gaggaaaagcgcatcgcagaggccaagaggctggaggaagaggagaaatataaggtagag
gccaggagactgcaggaggaagagcagagaagacaacaggaggagcaggagaggagaaga
cgctatttggaggatgaagccaggagaaaaaaacaggaagaggaggaagagcgcaggagg
ctggaagcagctgaaaaccagaggcttgaagaggaacggcgaaaaggagaggagcacaaa
caccaagaggaggcctccatgactgagaggctcacttctctgttcggaatgataagaaag
aaggaggaaaagaaggacgacgtccatcagcagaccaaagaggagcagcctcctgtcgca
gcccctcgcactgagtcagtgtcccacaacacaaatccattccaagacatccccgtccac
tcagatcctccagctgccaccaaccaaagtccgtctgatcccctgaaattcagccggaac
ccacaaacgccttcttccacggtcttccaaaaccgcaccgctaaagtgtctgcagtcaaa
cccagattgcctcaaattttggagtctgaacctgctgactaccaaagcaccagtcagcca
tgtccttccccaaaccaatcggaggctaccctctctagcatttccttggagtcccctgat
accttctccagcttgcactcatccgtggcccccgctaacgccagacaaagtccgtccggt
tctccgcgtggcagcacagaagatttatcgatcgtcaattctgaaggatcttttgacacc
atggcggatcagaggagaagatcacctttaccacctttgtattctggacacagaacccat
tctggaagagatcaggttccggtcagagagttcaagaaccctgcttatgtagaagatgat
gattcgcagcaaagaaaggtttctccaccgcttccagattataatacactctttcctcag
aagagacacggagtgcagggcgaaactcgatgggataacttagtctcagagttcagtaag
aagcatggagactgtacacctgagcttatgggtcctgagatgagtgtggatggaccagtg
gatcagacgaggtctaggtttcacgaaatgcaagaaaatcctgatatcaggaaacatcag
gagaccaaacctgtgtcaacaaagaaatttgcagccccagctccacctcggcattctgcc
tctcaagtccctccttcagcggtcgagtccggtcaaagacatggccagaaggtcacgcca
cactctctcctgaggtctctttcacctacgtctaaaacaaccaccacagcaagcagcaga
acgtcaaaagatgaagaaaggaaggagccgcattcctcagctgcagccacacctacatcc
agaccacccagcagatcggctgctgatacagctccattagatgatcaaaggaaaccacaa
gtctcctcaaacaaggaagcaccgaccgctaaacccagacaaagggttagtggcacggag
ccagccaagcagaaggaatctgctgtgaagccaagcgtccaaacctccagtttaaatatg
agcagcatgaacaaaaaggaaagggaaaactttgcaaactttcttcagtattccaactct
gagcgcctatctcaagactccagaggaaagctgaagcctgatcaagaatcaggaaatgtg
cggagagagcagacagataattctgataacggctttaatcaggagaagcaggctgataca
ttggctaatttgaatggcaatgattcagtcaaacaagcccagagcagaaaaaaggatgaa
cattcaaacccaggcagtcctgcctttcagaggaggaattcatcaagaagaaaaattccc
ctgccttccattcgctctgagaacattttcacatcccaacaagaaccagaatctaaagag
ccgacagcctcaaccacaaccagtcaagtggtctctgcaagagggggcagcaaagcattc
gccccagcgcagcctgaaagtgacctcaaaccagaaaatggtctctatggagaggaggat
ccttctcagtcagcgtttccttcctcccagcccctctctgttgttctggaggaaccagga
aaaccgctgttgaaagcgtgggtgtctccctccgaagcccagcctgtcagtactcagagt
aacaatggaggtgggctaggattgagtccacgcaggcctcatccagtgaagcccatgagt
tcatctgatagccagtccaccagctcccctgctgctaaagagatcaaagtttgggacact
acccctgggaaaattaagctggaagactctgtgggaagcggcccttacagtcagctgacc
acagaggagctgatcaagctggtggtcaaacagcagaccgacctctccaagaaagacgcc
aagatcacagagctggaggagtacatcgacaatctgctggtccgggtcatagaggagaaa
cccaccatcctgcagtctctaactgttaccaagccagtgtga
DBGET
integrated database retrieval system
