Cyprinodon variegatus (sheepshead minnow): 107082325
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Entry
107082325 CDS
T06110
Name
(RefSeq) LOW QUALITY PROTEIN: F-box/WD repeat-containing protein 10-like
KO
K10266
F-box and WD-40 domain protein 10
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107082325
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107082325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_HPS5
F-box-like
Beta-prop_RIG_2nd
NOMO_6th
F-box
Motif
Other DBs
NCBI-GeneID:
107082325
NCBI-ProteinID:
XP_015226429
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MSAHFIELGSGLLDEKSLICCRSVCKYWRLIAEETLEEIRLTEVLNSQIKDMMECWRRNR
IPSPSFANFVEVPVPLNDDEQEDVPSTCQEVVPFQAVYNKIKTKTVKMEERNVYCGAYFI
DVVLKQEDKNRVLDYRGGRLMAMSYNKKWVQLLRVASETKTIAVLKGHLGPIRAMLLCEE
RNLLITAACDSNIRCWNIRTGRCDMVLCGHSGTINCLDVHADSLVSGSKDCTVKVWSLHT
GQRLQGLRFRHRASVQCVKINRATIYSSCNQGVVKIWNMENGSLLKVIKAHRSSVKCLFL
DEWHLLSGDSKGNVMAWSVNCGASGCLMTFSHPEAVKSLTLTYLRVITGCSDRKIRIFNF
LNGDCLTYITLRPESGPLLSLCFQENSILVNTASSVQLYQFSKVVWDYTNRAQENVVTQG
GSLSETSADKGRKMSHTFPARGDMAPPSQRTLYSNSVKPKSTSFLQESRFHVNQRVCGEN
RKQPVIQSEKAACGRMKKRSAHHPPTRDALFLRLAAIQRARCVDEVSINTEYNARLGDLW
RAEHNLRKVSTPTDSTKRLAQEMYLRGAALALRLFSKLXGFRGFQLEDCFQSKTDKADHP
TDLP
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcccactttattgaacttggatctggtctgctggatgagaaatcactgatttgc
tgtaggagtgtctgcaagtactggcggctcatcgcagaggaaacattggaggaaatcaga
ctcacagaagttctcaacagccaaattaaagacatgatggagtgttggcgcaggaaccgc
attcccagtccttcttttgccaactttgtggaagtcccagttcctttaaacgatgatgag
caggaggacgttccttctacttgtcaggaggttgtgccgtttcaagccgtctacaacaag
attaaaacaaagacagtaaaaatggaagagagaaatgtttattgtggcgcatactttata
gacgtggtgctgaaacaagaagacaagaaccgtgttctggactatagaggaggccgcctg
atggcgatgagctacaataaaaaatgggtgcagctgcttcgtgtggcgtcggaaacaaaa
accatcgcagtcctgaaagggcacctcggcccgatacgggccatgctgctttgtgaggaa
agaaacctgctaataactgcagcttgtgattcaaatatcagatgttggaatataagaaca
ggcaggtgtgacatggtgctctgcggtcattctggaaccataaactgcctggatgtccac
gccgacagcctagtctcaggaagcaaagattgcacagtaaaagtttggagtctgcacacc
gggcagcgtctccagggtttgaggttcagacaccgcgcttctgtccagtgtgtgaagatc
aacagagctaccatctacagcagctgtaatcagggagtggtgaaaatctggaacatggag
aatggatcgttgctaaaagtgatcaaagcccacaggagctcggtgaagtgtttgttttta
gatgagtggcaccttctgtccggcgactctaaaggcaacgtcatggcctggagcgtcaac
tgtggagcctcaggatgcctcatgacgttcagccacccagaggcggtgaaatctttaacc
ctcacttacctccgtgttattaccggctgctctgatagaaagattcgtatatttaacttc
ctcaatggagactgtctgacatacataaccctgaggcctgagtcaggcccgctgctgtct
ttgtgcttccaagaaaacagtattttagtgaacacagcatccagtgtgcagctctaccag
ttttccaaagtggtttgggattacaccaacagagcacaggaaaatgtggtaactcaaggc
ggttcgctctctgagacatctgcagataagggcagaaaaatgtctcacaccttcccagca
agaggtgacatggctccaccgagtcaaaggaccctttactcaaacagtgtgaaaccaaag
agcacatcgtttcttcaagagagtcgattccatgttaaccaaagagtgtgtggtgagaac
cgtaaacagccagtgattcagagtgaaaaagcagcatgtggaaggatgaagaagagaagt
gctcatcatcctcccacacgcgacgccttgttcttaaggctggccgccatccagagggca
cgatgcgtagacgaggtcagcatcaacacggagtacaatgccagactcggagatttgtgg
agggcagaacacaacctaagaaaggtttccactcccactgactccacaaagagattggct
caggaaatgtacctcagaggggctgctttagctttacgtctcttctccaagctgtgagga
ttcagaggtttccagctggaagactgtttccagtccaagacagacaaagcagatcatcca
acagaccttccctga
DBGET
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