Cyprinodon variegatus (sheepshead minnow): 107082334
Help
Entry
107082334 CDS
T06110
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107082334 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvg03400
]
107082334 (rad54b)
DNA repair and recombination proteins [BR:
cvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
107082334 (rad54b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_22
Nodulin_C
Motif
Other DBs
NCBI-GeneID:
107082334
NCBI-ProteinID:
XP_015226441
Ensembl:
ENSCVAG00000009200
LinkDB
All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MRRSGAPSQLLGNAAKKPRFLPPGASALYPVTESKPLVSKHGLENALDKVHRSLSASVVT
KTTCTVQAETSQAPPGLSKVLACVLSATETKENLIETKYEDSTSDHTEDVNLSGLNESPP
WTHGSPQTPQPPSDPADSGCALDGARYFSVVWCKASKKKHKRWEGDAVLVVRGRSVVLKD
MEGKDIGKGSGYKVSELASLSEGETLMIGGKEIEVMGIISAEDFAKGRCFQEVQTDQAES
HTKALPPPSRSFNSKRFCPPSMLGRSGLPENNKPQGEQTSKPRYDPLAPGALVMPRPSSN
HQWLHNKSGLSVVDVVVDPHLTTHLRPHQREGILFLYECVMGMRAAGRHGAILADEMGLG
KTLQSVALCWTLLKQGPYGGKPIVKRVLVVTPGSLVQNWRAEFNKWLGRERISIFTVDQD
HRIEEFLLSPLHSVLVISYEMLLRGLEQIQKVEFGLIICDEGHRLKNSSIKTSSALSSLS
CNRRVILTGTPVQNDLQEFYAIIEFVNPGILGSTTAYRKVYEEPILRSRQPSCSEEDRVL
GEERAAELSRLTGMFILRRTQEIINRYLPPRLDWTLFCMPSPLQQKLYRHLLCHQVFRAC
LQGFTQSSTHLACITALKKLCNHPGLLHTTVKERTDRGSMESSLYEGLSDLFPESYSLAG
FSTSDSGKLLVLSDLLSAIRQLSPSDRVVLVSNYTQTLDLLQDMCVHAGYTFLRLDGQTP
VSQRQRLVDSFNSPYSQSFVFLLSSKAGGVGLNLIGASHLVLYDIDWNPANDIQAMARVW
RDGQKKSVHIYRLLTAGTIEERIFQRQVSKQGLSGTVVDLGKAAEHTSFSTSELRDLFSL
TDTPCLTHDLLNCSCSMDGSVNDVEGEEVEQISDRPCQLGRQGDRKGAAQKHLSMSELMQ
WRHFSGDTHSYSDPYLDHARSHITFAFQTTISDAAQ
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgctcaggagctcccagtcagcttttgggtaatgcagcgaaaaaacctcggttc
ctgccacccggagcttctgctttatatccagtaactgaatcaaagcctcttgtctctaaa
catggtttggagaatgctctggataaggtccacagaagtctttcagcatcagttgtgact
aaaaccacctgcactgttcaggctgaaactagccaggctcctccaggcttgtccaaagtg
ctggcctgtgtcctcagtgctacagagactaaagaaaacctgatagagacaaaatatgaa
gactctacaagtgaccatacagaggatgtaaatctatcaggactaaatgaaagccctcct
tggactcatgggtctcctcaaacccctcaacctccttcagatcctgcagactctggctgt
gcacttgacggggcccgttactttagtgtggtctggtgtaaagccagtaagaagaaacac
aagcgctgggaaggtgacgccgttctggttgtgagagggcgttctgttgtactcaaagac
atggaggggaaggatattgggaagggtagtggctacaaggtgtcagagctggcctcactg
tctgagggagagacgttgatgattggagggaaggagatagaggtgatgggcatcatttcc
gctgaggactttgccaaaggacgctgtttccaggaggttcagacagatcaagcagagtcg
cacacaaaggctctcccgcctccctctcgcagctttaactccaaacgcttctgccccccg
tcaatgttggggagatcagggcttccagaaaataataaaccacaaggggaacaaaccagc
aaacctcgatatgaccccttagctccaggtgcgctggtgatgcctcgcccctcttctaac
caccagtggcttcacaacaagtcaggcctttctgtggttgatgtggtggttgacccacac
ctgaccacgcacctgcgaccccaccagagggagggcatcctcttcctctatgagtgtgtt
atgggcatgagagctgcaggtcgccacggcgccatcctggctgatgagatgggtcttggg
aagactctgcagagtgtggcgctgtgctggacgttgttgaagcaaggcccttacggcggt
aaaccgattgtgaagcgggtcctcgtggtcactcctggcagcctcgtgcagaactggaga
gcagagtttaacaagtggctcggccgggaaaggatcagcatcttcactgtggatcaggac
cacaggatagaggagtttctgttatctcctctacatagtgttctcgtgatcagctacgaa
atgctgctgcgcggcctggagcagatccagaaagtggagtttgggctcatcatttgcgac
gagggtcacaggctgaagaacagcagcatcaaaacatcctccgccctcagcagcctcagc
tgtaaccgcagagtcatactcacagggacgccagtacaaaacgacctgcaggagttctac
gccattatagagtttgttaacccaggaattcttggttcgacaacggcttatagaaaagtg
tatgaggaaccaattctacgctccagacagccatcctgctctgaagaggacagagttctg
ggggaagagcgtgctgctgaactctctcgtctcactggcatgttcattttgagacggaca
caggaaatcattaaccgctacttaccacctcgtctggactggacattgttctgcatgccg
tccccgctgcagcagaagctgtacagacatctcctctgccaccaggtcttcagagcctgc
cttcagggctttactcaaagcagtacacacctggcctgcatcactgcactaaagaagctc
tgcaaccatcctggtttgctccacaccactgtcaaggagaggactgaccgtggatctatg
gagagttctttatacgaggggctgtccgatctcttcccagaatcctattccttggctgga
ttcagcacctctgactctggaaaacttttagttctctctgacctgctgagtgccatcaga
cagctcagcccctcagatcgggtggttctggtgtcaaactacactcagactctggactta
ctacaggacatgtgcgtacacgccggttacacattcctgaggctggatggtcagacacct
gtaagccagcgccagcgactggttgacagttttaacagcccctactctcagagctttgtg
ttcctgctgagctccaaagcaggcggggtggggctcaatctgatcggagcgtcccacctg
gtgctatatgacatcgactggaaccccgccaatgacatccaggccatggctcgtgtttgg
agagatggacagaaaaagagtgtgcacatttaccgcctccttactgcaggcaccattgag
gagcgtatatttcagagacaggtgtccaaacagggcctgtcaggaaccgtggtcgacttg
gggaaagcggctgaacacaccagtttctctaccagtgagctgcgagatcttttcagtctg
accgacacgccgtgcttgactcatgacctgctgaactgcagctgcagcatggacgggtcg
gtcaacgacgtggagggggaggaggtggagcagatctctgacaggccttgccagcttggt
cgtcagggcgaccgtaagggggcggcacagaagcatctcagcatgtccgagctcatgcag
tggagacacttctctggcgacacacactcctactcagacccctacctcgaccacgcacgc
agccacatcacatttgccttccagaccaccatctccgatgcagcccagtga
DBGET
integrated database retrieval system
