Cyprinodon variegatus (sheepshead minnow): 107082351
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Entry
107082351 CDS
T06110
Symbol
chl1
Name
(RefSeq) neural cell adhesion molecule L1-like protein isoform X1
KO
K06758
L1 cell adhesion molecule like protein
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvg04515
]
107082351 (chl1)
Cell adhesion molecules [BR:
cvg04515
]
Immunoglobulin superfamily
L1 family
107082351 (chl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
Bravo_FIGEY
V-set
Ig_5
C2-set_2
Pur_ac_phosph_N
Ig_6
Ig_PDGFR_d4
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
107082351
NCBI-ProteinID:
XP_015226468
Ensembl:
ENSCVAG00000020246
UniProt:
A0A3Q2EFS6
LinkDB
All DBs
Position
Unknown
AA seq
1197 aa
AA seq
DB search
MRSQSPGLAATLMLSVITCICAFHTATAIDIPLEVLGHVNIEQLPTITDQAPSTLIALPF
DESFPMTCEAKGNPEPEFQWKKNGEDFDPYLDPRLIKEENSGTFVIPNNGNLTEYQGIYR
CYASNKLGTAISKDIEFIVPNVPKFPKENLEPLEVEEGQPFVLKCDPPSGIPPLQIYWMT
INLQHIEQDERVSTGLNGDLYFSHAVEKDSRRDYCCFAAFSKIRTIVQKNAMSVKVKTRK
GDSANAILERKPSLLTPPGDRSEKQLVKGENLELECIPEGIPTPQVEWMKVGGQLPVKAK
LENHKKLLIVPRAEQEDSGKYMCRAKNLLGEAIHYFTVTVEGPPEWVSEPESQLSMIGSD
VHIKCSASGVPEPTITWRVNGELLLESPAPNRKLLGDTIILHNAKASDSAVYQCEASNRH
GTLLSNANIMIMNLQPMILTNNGEDYSTVEGKGVIMHCKVFSSPPSTITWSKDDLSESVD
GPRFTVHNNGSLEINSVEESDAGQYTCLAKNTEGSSAIDAMLYIKDPTRIVLAPEDLQIL
KGTTARLSCLAEYDKSFSNDFELLWEKDNTEIALNYTEDSSRYILEDSNLHIVNVSHSDQ
GVYRCVAKTPLDRDTASASLKVLDVPDAPENLVLSELKSKSVKLKWIPGDDHNSPPTEFI
VEYEENKWEPGNWKELLRVPGNHNSAVLKLHGHIEYRFRVYAVSDVGAGPPSAPTERYKT
PPSAPDKNPENIKIEGRLPHEMDINWEPLMPIEHNGPGLEYKVSYRRQDVEEDWKEHTVK
RHSFVVWNTPTFVPYEVKIQAKNNQGWGPEPRIVSGYSGEDFPSAAPDDVAVEVMNSSAV
KVTWTRVHKDKLHGHLGGYRINWWRLRSLVDSKKSHGDKHSLTFPGDRTHATVPGLTPFS
EYSLIVMTFNGRGNGPGSHPVNFKTPEGVPEKNSDFRVTDVKRESVSLAWGPPIEPNGIL
TGYLLEYQLINDTEEVGALQAVDINNPDTTKWILRELEPLSKYKFYLRSCTAVGCGPVVS
EESITKLQSTSFSAPTVGIRKSLSTTSTPRSHVTKPTRSSIGLASIHGGISTQGWFIGLM
CAIALLTLIVLIACFVNRNKGGKYSVKEKEDLHPDVESQGMNDDTFCEYSDNDEKPLKGS
QRSLSREIKAADSGDSLVDYGDEDVQFNEDGSFIGEYGSRKEKRASTEIKAPTQTTA
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcacaaagcccaggattggctgccacgctgatgctgtcggtgatcacctgtatt
tgtgcctttcatacagctacagccattgacattcctcttgaggttttaggtcatgtaaac
attgagcagctgcccaccatcacagatcaggctcccagcactctcatcgccttacccttt
gatgagagcttccctatgacgtgtgaggccaaagggaatcctgagccagaattccaatgg
aaaaagaatggggaagattttgacccttatcttgacccccgtctgatcaaagaagagaat
tctgggacctttgtgatacctaataatgggaacctcacagagtaccagggaatctatcga
tgttatgcatcaaacaaactggggacggccatatcgaaggatatagagttcattgtgcca
aatgttccaaaattccctaaagaaaatcttgaacctcttgaagtggaagaaggccaacca
tttgttcttaaatgtgaccctcccagcggcatacctcctcttcagatttactggatgacc
atcaatcttcagcacattgaacaagatgaaagggtttccaccggcctgaatggagacctt
tacttctcccatgctgtggaaaaggatagcagaagggactactgctgctttgctgccttc
tcgaagatacgaacaatcgttcagaagaacgccatgtctgttaaagtcaagacaagaaaa
ggtgacagtgccaatgctattctagagagaaaaccctctcttctgacgccccctggtgac
aggtcggagaaacagctggtcaaaggagaaaacttagaattggagtgtattccagaagga
attccaactccgcaagtggaatggatgaaggtaggaggtcagcttcctgttaaagcaaaa
ctggagaaccacaagaaactgctgattgttccgagagcagaacaggaggacagtgggaag
tacatgtgcagagcaaaaaacctactgggagaagctatccattacttcactgtgacagtt
gaagggcctccagagtgggtgtcagagccagagagccagctcagtatgatcggctcagat
gtgcatataaagtgctccgctagtggggtcccagagccaaccatcacatggagggtgaac
ggtgaacttcttcttgaatccccagcacccaataggaagttacttggtgataccatcatt
ttacacaatgctaaagcttctgacagtgcagtctatcagtgtgaggcctccaacagacac
gggacccttctatccaatgccaacatcatgatcatgaatctacagcctatgattctgacc
aataatggggaagattattctacagtggaagggaagggtgtgataatgcactgtaaggtc
ttcagttctcctccttcaacaatcacttggagcaaagatgacctatctgaatctgttgac
ggtcccaggttcacagttcataacaatggttctctggagatcaacagcgtggaggaaagt
gatgcgggacagtacacgtgtctggccaaaaatacagagggatcatctgccattgatgct
atgctttacataaaagatcccactagaatagtgttggccccagaggacctacagatctta
aaaggtaccacagctcgactctcctgcctggcagagtacgacaagtccttcagcaatgac
tttgagctcctatgggagaaagataacacagaaatagcactcaactacactgaggattca
agtagatacattttggaggatagtaatcttcacatcgtcaatgttagccacagcgatcag
ggtgtgtataggtgtgtggccaagactccattggacagagacactgcctcagcctccctc
aaggtgttagatgtccctgatgctcctgagaacttggtactttctgagctcaagagtaaa
agtgtgaagctaaaatggatacccggggatgaccacaatagcccacccacagagttcatc
gttgaatacgaggaaaacaagtgggagccgggaaactggaaggagctgctccgagtccct
ggaaatcacaattctgctgtcctcaaactccacggtcacatcgaatatcgcttccgggtg
tacgccgtcagcgatgttggggcagggccacctagtgcgcccacagaaagatacaaaact
cccccgtcagcccctgacaagaacccagaaaatatcaaaatcgaaggtcgtttgccacat
gaaatggatatcaactgggagcctctgatgcctatagagcacaatggccctggtctagag
tataaggtgagctacaggcgacaggatgtggaggaagactggaaggagcacactgtgaag
aggcactcatttgttgtttggaacactcccacattcgttccatacgaagtcaagatccaa
gccaagaacaatcaaggctggggcccagagcccaggattgtgagtggctattcaggagaa
gattttccctctgctgcccctgatgatgttgctgtggaggtgatgaacagctcagcagtc
aaggttacctggacacgcgtacacaaggacaagctgcatggacatctgggaggctacagg
ataaactggtggcgtttgcgcagtctggtggactcgaagaaaagccacggagacaagcac
tccttgacgttccctggggaccgaacccatgccacagtgccgggcctgacgcccttttct
gaatacagcctcatcgtcatgaccttcaacgggcggggtaacggtccaggcagccatcca
gtcaacttcaaaaccccagagggagtcccagagaaaaattcagatttcagagtcactgat
gtaaagagggaatctgtctctctggcctggggccctcctatagagcctaatgggattcta
acagggtaccttctggagtaccaactgattaatgacacggaggaagttggggccctacag
gctgttgacataaacaaccctgacaccactaaatggatcttgcgtgagttagagcctctg
agcaaatacaagttctatctccgctcctgcaccgcagttggctgtgggcctgtcgtcagt
gaggagagcatcaccaagctgcaatcaacatctttttcggcccctactgttggcatcaga
aagtccctttcaaccacgagcactccaaggtcacatgtaaccaaacccactcgttcgagc
ataggtctggctagcatccacggaggaatatccacccagggctggtttattggtctgatg
tgtgccatcgctcttctcacactcattgtgctgatcgcctgctttgtcaatagaaataaa
ggaggaaagtactctgtgaaagaaaaagaagaccttcatccagacgtggaatcccagggc
atgaatgatgacacattctgtgaatatagcgacaacgacgagaagccactgaagggcagc
caacgctcccttagcagggagatcaaagcagcagacagcggggacagcctggtggactac
ggtgatgaggacgttcagttcaacgaagacggctcatttatcggcgagtatggaagccgg
aaggagaagagggcatccactgagatcaaagccccgactcagaccacggcgtga
DBGET
integrated database retrieval system
