Cyprinodon variegatus (sheepshead minnow): 107082498
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Entry
107082498 CDS
T06110
Name
(RefSeq) Nance-Horan syndrome protein-like isoform X1
KO
K24144
Nance-Horan syndrome protein and NHS-like proteins
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvg04812
]
107082498
Cytoskeleton proteins [BR:
cvg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
107082498
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHS
Motif
Other DBs
NCBI-GeneID:
107082498
NCBI-ProteinID:
XP_015226697
LinkDB
All DBs
Position
Unknown
AA seq
1734 aa
AA seq
DB search
MPFAKRIVEPQLLCRHQIPNDEGVLFEDLCAISNVVLSRTLRQLSDLARHACSLFQELEN
DIMSTNKRVWFLQSKIGQIQQTASALDPKKEAVPVSNLDIESKLSVHYQAPWHQQHNVFH
PLTRPPCLEELHRNAQLSLRALHQEEQQHQLSSSRERNRVTISISVAPPMPTFPSPHSIR
RQQRSRLARAQERAERERELEYQPRKERSVKETEMQTTERKLQEKPVREEDMKTIERKFE
CFYSLDTIEGCIFIPWNRKATSTENRERAEVTGGQTAKALTHSTPSAQDKQTNCSKENIP
PSDQKANDDSQAVSSCIIPINVTAGVGFDREASARCSLVHSQSVLQRRRKLRRRKTITGI
PKRVQHDMDSDESPVARERTVIIHANSHQLSLCQEDLSISGRLHHTRDSGCQTDDFLIAC
TAAPSRRRIRAQRNHQGIPASLSHSTGNISSLGDQSDFPYIPSSSHGGRLRSRSLPREGG
RLMDSDEDDDDNYDDDDEDEELSPYEGEDFIPSGPSPRMKMMMMKDEEESTDDQAAPEPL
QLGSLKRLQRSTERDRVGGGGGSPEPSWMERGRSRLPRKADMGSCEISSSSDTFSSPIHS
VSTTGVLGSHVDHKEDHQSSSGNWSGSSSTCPSQTSETIPPPSSPPLTGSSHCDSELSLN
TAANAIDEGFSLDPSYHSDLRPQSQGHRSSSFTSSATDQLDDAGVSTASEGEWAYLPDQD
QTDADQDLEHTQKLSDSHRFPQEYSSKEGLNDQTCFNKQKNNTEKEPDSHYPSDREGYFS
SSVNFGEYNQTYKEYTCNYADLGPDSHQSNTLETRLSRGSYPQSSLELKTGTMTLGRTFR
PLRKSKVKPPPPKRTSSLKEASISVDVGTDTQTDKDQPKIVNEQELTSSSTDMKLELDLE
IGVAPEPLQSSCLVSESLGTWGMGLGGAMDVVEPMSFSSADTHSFKDEGAVQSDYADLWL
HNSDLKSNNGEYASMSNSSTATGTTIMDCMKSPDSSSSSTETPPQAVAQTLESKQSSPSL
PSGDYKLGSPEKLASLASPSSGYSSQSETPTSTLPSSSAAFFPGPLSPSAGKRKPKVPER
KSSLSSLQQFPRDGASISFCNKRDPDFPPPPSQLDLNVLHGGYVRHTLSHRAYHMHTLHH
SKHRVANVLSGGPKTSVPEVTNTNPPTSSSSALSNPSSNVLPVTPSTIRSVQLHPVSQFA
EPQSTSITYQDTANGAETVTRPKCPPSGSTLAPPPVNTRPLPPRRPPPRPPCHDHISSPE
RPQPPPPGRHPDGPPSYESLLLRQDRYGPGTFWAMTAFRTRMDPSSDLSEDSSPLHRPVP
RAPHPSPVDLHTHIHSHAEFRGLTHSANARSEFRVLGERSFSQDDDEDDEEEEDEEEEQV
KELHRAACSKGGIRSDHPPPPAYEFAGGSHLNSGPWASPVKVPGNTTETSHPYSISDARK
GQEMQKEEKEIKSGATRSAHQHPLQESKDDSTTPDTEDYFSKDSTPSDNSLSPLTEDTKV
DDDIIITSPNKSRTTEDLFAMIHRSKRKVLGRKDSGDINLKSRLCPAAAITPSNVSSGVI
PPAPPLNFPVTLANAVGSQRGPVPIYRSAKKSSTSNEEFKLLLLKKGSRSDSSYRMSATE
ILKSPITPKTPGESLQEGPFRQPEEQTSMSQEPPVSGLDPIQIPGIFPRAISESFTPKTL
PMSAASRQGRSRIPPVANSSRYSTRSRLYTAPMQAISEGETENSDGSPHDDRSS
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atgccattcgccaaaaggattgtggaaccgcagcttctgtgcagacaccagatccccaac
gatgaaggtgtgcttttcgaggacctgtgtgccatcagtaatgtggttctctcgcggacc
ttgcgccagttgtccgacctggcgcggcacgcctgctctttatttcaggagctggaaaac
gacatcatgagcaccaacaagcgtgtctggttccttcagagcaaaataggccagatccag
cagacagccagtgccctggaccccaaaaaggaggcagtgccggtgtcgaacctggatata
gagagtaagctgtccgtgcactatcaggccccatggcaccagcaacacaatgtgtttcac
ccccttaccagaccgccgtgtttggaggagcttcacagaaatgctcagctgagtctgaga
gctctgcatcaagaagaacaacaacatcagctttcctcaagccgggagagaaacagggtg
accatctccatctccgtggccccacccatgcctacgtttccctcaccgcacagcatccgc
cggcaacagagaagtcggcttgcacgagcgcaagagagagcagagagggaacgagaactg
gagtatcaaccacgaaaggagaggagtgtgaaagaaacagagatgcaaactacagagaga
aagctacaagagaaacctgttagagaggaagatatgaaaacaatcgaaaggaagtttgag
tgcttttactcacttgacactattgaaggttgcatcttcattccatggaatagaaaggct
acatcgacagagaacagagaaagggctgaggtcactggaggccaaacagccaaggcctta
acccacagtactccctcagcccaagataaacaaacaaactgttcaaaggaaaacatcccg
ccatcagatcagaaggcaaatgacgattctcaagctgtgtcctcttgcattatccccata
aatgttacagcaggagtcgggtttgacagagaggccagtgcccgttgctcactagttcac
tcccagtcggttcttcagagaaggaggaagctgaggaggagaaagactatcacaggaata
cccaaacgggtacaacatgacatggactcagatgaatcacctgtggcaagagagcgcaca
gtgatcatccatgccaattcacatcagctttctctttgtcaagaggacctctcaattagt
gggcgtctccaccacactcgtgactctggctgccagacagatgatttccttatagcatgc
acagctgctccctcccgaaggcgcattagagctcagcgtaaccatcaaggtatccctgcc
tctttgtcccactccacgggtaacatttcatccctgggagaccagtctgacttcccatac
atcccgtcctccagccatggtgggcggttgcgttcacgtagccttccaagagagggtgga
cgtctgatggacagtgatgaagacgatgatgacaactatgatgatgatgatgaagatgaa
gaattgtcaccttacgaaggtgaggacttcattccatcaggaccaagccccagaatgaag
atgatgatgatgaaggatgaagaagagagcacggatgatcaggcagcccctgagccactg
caacttggaagtctaaaaagactacagaggtctactgaaagagacagagtgggtggagga
ggtggaagtccagagcccagttggatggagaggggtcgttctcgcttgccccgcaaggct
gacatgggtagctgtgaaatctcatccagttctgatacttttagtagtcctattcactca
gtgtctactacaggagttctaggcagccacgtggatcacaaggaagaccaccagtcatca
agtggtaactggagtggctccagctccacgtgcccctcacagacatctgaaaccatcccc
ccaccttcatctccacccctaacaggctcttctcactgtgattcagagctatcacttaac
acagctgccaatgctatcgatgagggattttccctcgatccttcctaccactctgacctc
aggccccagagtcaaggccacagatcaagctcttttacatcatcagccacagaccagctt
gatgatgcaggggtcagcacagccagtgaaggggagtgggcgtacctccctgaccaagac
cagaccgatgcagaccaagacctggaacacactcaaaagctgagtgacagccacagattt
cctcaagaatacagctcaaaagaaggccttaatgatcaaacatgttttaataaacagaaa
aacaatactgaaaaagagcctgactctcattacccatctgatagagagggttacttctca
tcctctgtaaactttggggaatataatcaaacttacaaagaatacacctgtaactatgca
gacctagggcctgactctcatcagtccaacactttggaaactcgattatcccgcggcagt
tatcctcaatcatcacttgagttaaaaacaggcactatgactttagggagaacttttcgt
cctttaagaaaatcaaaagtcaaacctccgccgccaaagcgaacctcctcactaaaggaa
gccagtattagtgttgatgttggaacagacacacaaacagataaggatcaaccaaagatc
gttaatgagcaagaacttacctcgtcttccacagatatgaagttggaactggacctggaa
attggagtagccccagaaccattacagtcatcttgtctagtttctgagtctttgggaact
tggggcatgggactggggggagccatggacgtagtagagccaatgtccttcagctctgca
gatacacattcatttaaggatgagggtgctgtgcaatctgactatgcagacctgtggctt
cacaacagtgatctaaagtctaacaatggagagtacgcatcaatgtcgaactcaagcaca
gccacaggcaccaccattatggattgtatgaagtcaccagacagctcttcctcttccaca
gagacacctccccaggctgttgcccagactcttgaatccaagcaaagcagcccatctctc
ccctctggggactataagcttgggtcacctgaaaaattggctagcctagcttcaccatcg
agcggttattccagtcagtctgaaaccccaacatcaactttaccctcatcatcagcagca
ttcttcccaggaccactgtccccttcagctggcaagagaaagcctaaagtgccagaaagg
aagtcatctctctcttccttacaacaatttcctagagatggagcttccatttcattttgt
aataagagagatccagactttccacctccaccctcacaacttgatctgaatgttctacat
ggaggctatgtgagacacacattatctcaccgagcataccacatgcacaccttacaccat
agcaaacacagagttgcaaatgtcttatctggtggaccaaaaacatcagtccctgaagta
actaataccaacccaccaacaagttcaagctctgctttatcaaacccaagctcaaatgtt
ttgccagtaactccatctacaattcgttctgtgcagcttcatccagtaagccaatttgct
gagccacagagtacttccataacataccaggacacagcaaatggagctgagactgtaaca
aggccaaaatgtcctcccagtggctctactctagctcctccacctgttaataccaggcca
cttcctcctcgaagaccacctccaagacccccatgtcatgaccatatctcctctcctgaa
cgtccacagccgcctccacctggtcgccatcctgatggacctccatcctatgaaagtctg
cttctaaggcaggatcgttatgggccaggaacattttgggctatgactgccttcagaaca
aggatggacccttcatcagacctctctgaagacagttcacccctgcataggccagttcca
cgtgctccacacccttcccctgttgatcttcacacacatattcactcacacgcagaattc
agagggctcacccactcagcaaatgctcgttcagagtttagagttttgggggagcgctct
ttctcccaggatgatgatgaagatgatgaagaggaggaagatgaggaggaagagcaggtg
aaagaactacacagagctgcatgttccaaaggaggaattcgatcagaccaccctcctccc
ccagcatatgaatttgctggaggatcccatctaaactcagggccatgggctagtcctgtt
aaagtgcctggtaacacaaccgagacatcgcatccttactcaatcagcgatgccagaaaa
ggacaagaaatgcagaaagaggagaaggaaataaaatcaggtgctacccgaagtgcccat
cagcacccactccaggaaagcaaagatgactccaccactcctgatactgaggattacttt
agcaaagattccacacccagtgacaactcactttctcccctgacggaggacaccaaagtg
gatgacgatattattatcacatcccctaacaagagtcgtacaacggaagacctatttgcc
atgatacacagatccaagaggaaggttctgggccgtaaagattcaggagacataaacctg
aagtctcgtctttgccctgctgcagctataactcccagtaatgtttccagtggtgttatc
cctccagcaccacctctgaactttccagttactttagccaatgctgttgggtcacaaaga
ggccctgtccccatctatcgcagtgctaaaaaatcaagcacgtcaaatgaggagtttaaa
cttcttttgttaaagaaaggtagcaggtctgattctagctatcgcatgtcagcaacagag
attctgaagagtcccatcacccccaaaacaccaggggagtcccttcaggaaggtcctttt
agacagccagaggagcaaacttctatgtcacaggagcctccagtctctggtctggaccca
atccagataccaggaatttttcctcgggccatctcagagagtttcactcctaaaaccctt
cctatgtcggctgcatctcgtcagggacgttcccggatccccccggttgctaacagcagc
cgctacagtacacgcagtcgcctctacacagcgcccatgcaagccatttctgaaggggag
acagaaaactcagatgggagccctcatgatgatagatcatcataa
DBGET
integrated database retrieval system
