Cyprinodon variegatus (sheepshead minnow): 107082545
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Entry
107082545 CDS
T06110
Symbol
itgb6
Name
(RefSeq) integrin beta-6
KO
K06589
integrin beta 6
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04510
Focal adhesion
cvg04512
ECM-receptor interaction
cvg04810
Regulation of actin cytoskeleton
cvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107082545 (itgb6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107082545 (itgb6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107082545 (itgb6)
04810 Regulation of actin cytoskeleton
107082545 (itgb6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvg04147
]
107082545 (itgb6)
04515 Cell adhesion molecules [BR:
cvg04515
]
107082545 (itgb6)
Exosome [BR:
cvg04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
107082545 (itgb6)
Cell adhesion molecules [BR:
cvg04515
]
Integrins
Integrin beta subunits
107082545 (itgb6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
PSI_integrin
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
Oxidored_q2
Motif
Other DBs
NCBI-GeneID:
107082545
NCBI-ProteinID:
XP_015226777
Ensembl:
ENSCVAG00000014717
UniProt:
A0A3Q2D227
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MWLLLLSLVLRHWIYTVEGSCSTVKAGTCDECLQRSPHCAWCTQENFTDWVSVSERCDTL
DNLLEKGCSRDHLLFPVSESQILLERPLGKKIEYANSTQISPQKISLKLRPGSEETFQVK
VQHTEDYPVDMYYLMDLSASMHDDLKMIRELGSSLSREMSKLTSKFRIGFGSFVEKPVLP
FIKITEKSLANPCSDVYTTCLPTFGYKHVLSLTSQTSSFNDIVAKQSVSANIDNVECGFD
AIMQAAVCGDKIGWRNDSMRLLVFVSDGDSHFGMDSKLAGIVIPNDGQCHLDENNEYSMS
KKQEYPSLGQLIDKVVENNILLIFAVTENQINNYKNYANLIPGATVGELASDSRNILELI
VTAYKELRSEIELEVLGDTQDLQMSFTTICPNGTVFPDLKQCSNIKPGETVVFNVSVGTS
GCVPGVRHFSLKPVGLQDSLEVELESLCSCDCQQPPMANSSQCREGQGIYHCGVCVCQPG
FLGAQCECNEETALLSNCLISNDSEICSGQGDCHCGQCLCNASSFGRIYGPYCECDNYSC
VRFRGELCGGHGVCDCGECRCESGWTGEYCNCSSSTEACMSEDGSLCSGRGQCKCGQCIC
SVPGASGVKCERCLTCGDSCSSAMSCVECHLLEKDDFGLCEQNCNAAKISINTTADYDKK
ASMECTLMMENGCRMAFFVMEGETGTVAYNPHKYGCPEPPNIPMIVLGVSLSVVCIGLIL
LAVWKALVSVHDRKEVARFEAERANAKWQTGTNPLFKSSTSTFKNVTYKNTHRKECTINH
Y
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttctactgctgagcctggttctgcggcactggatttacaccgtggagggatca
tgttcaactgtaaaggctgggacttgtgatgagtgtctgcagcgcagtcctcactgtgcc
tggtgcacacaggagaatttcacagactgggtttcagtctcagagagatgtgacacactg
gataatttgctagaaaaaggatgctcaagggaccatctcctgttccctgtttctgaaagc
caaattctcctagaacgacccctcggaaaaaagatagaatatgcaaatagcactcagatt
tctccacaaaaaatttccctcaagctacgaccaggcagtgaggagacttttcaggttaag
gttcaacatacagaggattatcctgtggatatgtactacctgatggacctatcggcctcc
atgcatgatgatcttaaaatgatcagagagttgggctcctctctgtccagagagatgtcc
aaactcaccagtaaatttcgaataggctttggctcttttgtggaaaaacctgttcttccc
ttcatcaagatcactgagaaaagtctggccaatccctgcagtgacgtctacacaacctgc
cttccaacatttggctataagcacgtcttgtctttgacaagccaaaccagcagctttaat
gacatcgtcgcaaagcagagcgtgtctgctaatatagacaacgtggaatgtggttttgat
gctataatgcaggcagccgtttgtggggacaagatcggatggagaaatgattccatgcgt
ctgttggtgtttgtcagtgatggggactcacactttgggatggacagtaaattggccggg
attgtgattcctaatgatgggcagtgtcatttggatgaaaacaatgaatattctatgtcc
aaaaagcaggagtatccatccctcgggcagctgattgataaagtggtggagaacaacatc
ctcctgatatttgctgttacagaaaatcagataaataattacaagaactatgcaaatctc
atacctggtgccacagttggagaattggcgtcagattcgaggaacatcctggaactgatt
gtaacagcttacaaggagctgcgctcagagattgaacttgaggtccttggagacacacag
gatcttcaaatgtcctttacaaccatctgtccaaatggcaccgtctttcctgatctaaaa
cagtgctctaacatcaaaccaggcgagacggttgtatttaacgtgtctgtgggaacctca
ggatgtgtgccaggagtgcggcacttctccctcaaaccagtgggcttgcaggacagtctg
gaagtggaactcgagtccctttgctcttgtgactgccagcagcctcctatggcaaacagc
agccagtgcagagaaggccaagggatttaccactgtggcgtgtgcgtgtgtcagccaggg
tttctgggagcccagtgtgaatgcaatgaggagaccgctttgttgagtaactgcctcatc
tctaatgactctgagatatgcagtggtcaaggggactgtcactgtgggcagtgtttgtgt
aatgcatccagcttcggccggatctacggaccatactgtgagtgtgataattactcctgt
gttcgcttccgaggagaactctgcggaggtcatggggtgtgtgactgcggggagtgtcgc
tgtgaaagcggctggacgggagaatactgcaactgcagcagcagcaccgaggcatgtatg
tcagaggacggcagcctctgcagtggcagggggcaatgcaagtgtggccagtgcatctgc
tctgttcctggggcgtctggtgttaaatgtgaaaggtgtctgacatgcggcgactcctgt
agctctgcaatgagctgcgtggagtgccatctgcttgagaaggatgactttgggttgtgt
gagcaaaactgcaacgctgctaaaatttccataaacacaacggcagattatgacaagaag
gcttccatggaatgtacactcatgatggagaatgggtgcaggatggcgttttttgtaatg
gagggtgagactggaaccgttgcctacaatccacacaagtatggatgtccagagccaccc
aacatccctatgattgttctgggagtctccctctctgttgtgtgtattggtttgattctg
ttggctgtgtggaaggcactggtgtcggtccatgaccgtaaagaggtggcgaggtttgag
gccgagcgggcaaatgcaaaatggcagacggggaccaaccctctgttcaaaagctccaca
tctacatttaaaaatgtgacttataaaaacacacacagaaaggaatgtacgataaatcac
tactga
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integrated database retrieval system
