Cyprinodon variegatus (sheepshead minnow): 107082562
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Entry
107082562 CDS
T06110
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-3-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04080
Neuroactive ligand-receptor interaction
cvg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107082562
04082 Neuroactive ligand signaling
107082562
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107082562
Ion channels [BR:
cvg04040
]
Ligand-gated channels
GABA-A
107082562
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
107082562
NCBI-ProteinID:
XP_015226803
Ensembl:
ENSCVAG00000009174
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MAALQTNPKSPDLSLWVFIVFLSLFPQARAVIGHRDPLPDDSKDNITIFTRILDRLLDGY
DNRLRPGLGESVTEVRTNIYVTSFGPVSDTDMEYTIDVFFRQSWRDERLKFDGPMQVLPL
NNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLEDF
PMDAHACPLKFGSYAYTNNEVIYLWTQGDERSVSVAEDGSRLNQYDLLGHVIGKETISSS
TGEYVVMTTYFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTM
TTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYFTKRSWAWDGKREGMEI
REPFQANMARIKDMRRESATLSKKANNTFNIVGTTYGINVAKDQGLTTIAKSAPGPSAKH
SFLHKMDDPYTEAKKSYNRVSKVDKISRIIFPVLFFIFNLGYWATYVNRKPAIMKANNLN
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcagctttacagacgaaccctaaatcaccagacctgagcttgtgggtcttcatcgtt
tttctcagcctttttcctcaagccagggcagtcattggacacagagacccgctgcctgat
gacagtaaagacaatattactattttcacccggatccttgacaggctgctagatggatat
gacaacaggctacgtccggggctcggagagagtgtgacagaagtgaggacaaacatctac
gtgacaagttttgggccagtatccgacacagacatggagtacactatcgatgtcttcttt
cgtcaaagctggagagatgagaggcttaaatttgatggtccaatgcaagttctaccactt
aacaacctgctggccagtaaaatctggactcctgataccttctttcacaacgggaagaaa
tctgtggcccacaatatgacaacgcctaacaaactgctacgactagttgacaatggcacg
cttctctacacaatgaggttgaccatccatgcagagtgcccaatgcacctggaggatttc
ccgatggatgcacacgcctgtcctttgaagtttggaagttatgcgtacaccaacaatgag
gtgatctacttgtggacccaaggagacgagagatctgtctctgtggcagaggacggctct
aggcttaaccaatatgacttactgggtcacgtcattggcaaagaaaccatcagttccagc
acaggagaatatgtcgtgatgacgacatatttccatttgaaacggaaaattggctatttt
gtgattcaaacctaccttccgtgcatcatgactgtcatactgtctcaggtgtccttctgg
cttaacagagaatcggttcctgcccgcactgtgttcggggtcaccactgttctaaccatg
accactctgagcatcagtgctagaaactccctccctaaggtggcctatgccacagccatg
gactggttcatggctgtctgctatgcctttgtcttctctgccttgatagagtttgccaca
gtcaactacttcaccaaacgcagctgggcgtgggatgggaaaagagagggcatggagata
agggaaccgtttcaggctaacatggccaggattaaagatatgagaagagaatctgccact
ttgtccaaaaaggcaaacaacaccttcaacatcgtcgggaccacctacggtatcaacgtc
gcaaaagatcaagggttaaccaccattgctaagagcgccccgggaccttcagccaaacac
tcctttctgcataaaatggacgacccctatacagaggctaagaaatcctacaaccgcgtc
agcaaagtggacaagatatctcgcatcattttcccagttctcttcttcattttcaactta
ggctactgggctacatatgtcaacagaaagcccgccatcatgaaggcaaacaacctaaac
tga
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