Cyprinodon variegatus (sheepshead minnow): 107082645
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Entry
107082645 CDS
T06110
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04517
IgSF CAM signaling
cvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
107082645 (sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107082645 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvg04812
]
107082645 (sptbn1)
Cytoskeleton proteins [BR:
cvg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
107082645 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
107082645 (sptbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
SCAR_helical
WHD_MCM8
NPV_P10
BORCS6
Motif
Other DBs
NCBI-GeneID:
107082645
NCBI-ProteinID:
XP_015226917
Ensembl:
ENSCVAG00000007574
LinkDB
All DBs
Position
Unknown
AA seq
2221 aa
AA seq
DB search
MMTTMAAEFDPMELHGQYSSSDTVNNRWDDEWDNENSSARLFERSRIKALADEREAVQKK
TFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGEKLPKPTKGRMRIHCLENVDK
ALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQVRVVQVLDNAIETEKMVEKY
ESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLF
TIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQEKLEQLARRF
DRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERVQAVVAVAKE
LEVENYHDIKRIIARKDNVIRLWEYLLELLKARRQRLEMNLGLQRVFQEMLYIMDWMDEM
KMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVKAVINNANKHSVTDSGYKPCDPQ
VIQDRVAHLEFCYQELSQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQILSSMEHG
KDLTGAVRLLSQQRALEDEMSGRAGHLQHTIAEGQAMVDAGHFAATKIQERISDLQAQWA
ALEQLAAARKKRLEEALAMHQFQADADDVDAWTLDALRIVSSGETGHDEFSTQALVRKHK
DAAAEVESYRTVIDSLHEQAALLPKEEMESEDVQGRLAGIEERYKEVSELTKLRKQALQD
ALALYKMMSEANACEVWIDEKEQWLNSMEIPEKLEDLEVIQHRFENLEPEMNSQASRVAV
VNQIARQLIHSGHPSEKDIKTHQDKLNNRWSQFRDLVDQKKESLNSALGVQNYHLECNET
KSWIKEKTKLIESTQELGNDLTGVMALQRKLTGMERDLVAIEDKLSDLQGEAQRLAEEHP
DQAKAITDRLAEITAVWEEMKNTLKTREESLGEARKLQQFLRELDDFQSWLSRTQTAIAS
EDMPNTLSEAEKLMAQHEGIKNEINNYEEDYQKMRDMGEMVTQGQADAQYMFLRQRLQAL
DTGWNDLLKMWENRQNLLSQSYAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTTLEGAEAA
IKKQEDFMTTMDANEEKINGVLEAGRRLASDGNINAERILEKVASIDDRHKKNREAAVEL
LMRLKDNRDLQKFLQDCQELSLWMSEKMLTAQDMTYDEARNLHSKWLKHQAFMAELQSNK
EWLDKIQKDGMLLVSEKPETEAVVKEKLSSLNTLWENLESTTQTKAQCLFDANKAELFTQ
SCADLDKWLGSLEGQIQSDDYGKDLTSVNILLKKQQMLENQVDVRQREVVELQSQVKALG
QEVKDTDEVDGRRQVVEKKFQELLEPLRRRRDFLVASREVHQFNRDVEDEILWAQERIPV
ATSKDHGHNLQTVQLLIKKNQTLQKEIQGHQPRINDIMERSQSLLQDKSSNADVIRQRLV
ELQQLWKQLMEEVEQRHGRLQEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSAV
TMLKKHQIMEQAVEDYAETVHQLSKTSRGLVADGHPESERISMRQSQVDKLYAGLKDLSE
ERRGKLDERLRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTG
NIGQERVDGVNRLADELINSGHGDAATVAEWKDGLNEAWADLLELIDTRTQILAASFELH
KFYHDAKEILSRIADKQKKLPEEVGRDQNTVETLQRMHNTFEHDIQALGTQVRQLQEDAA
RLQSAYAGDKADDIQRREAEVLEAWRTLLEACDGRRIRLLDTGDKFRFFSMVRDLMLWMD
DVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKALLARKHFASEEI
KEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYLSSREMGQS
VDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERRRKPPTPEPAVV
QQEEAQQQSAVTQNGLPSDQDQDSPKDVGEGGGLVNGIVERSSKEPSPSHSPSSGRKAKN
SQSSTLPAQNQDSPSQLEAFLHRKHEWEGHNKKASNRSWHNVYCVIRNQELGFYKDSKAA
SQGVPYHGELPVSLKDATCDVASDYKKKKHVFKLRISDGNEFLFQAKDEEEMSNWIQVVL
NAATTERSEVQGSNPGTPSTGRAQTLPASVSLTTESSPGKREKDKEKEKEKRFSLFSKKK
Q
NT seq
6666 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgacgatggcggccgagttcgacccgatggagctgcacgggcagtacagcagc
agcgacactgtgaacaaccgctgggacgacgaatgggacaacgagaacagctcggcgagg
ctctttgagcgctcccgcatcaaggcgctggcagatgaacgtgaagcagtccagaagaag
accttcaccaagtgggtcaactcccacctgtccagagtctcctgcaggatcacagacctc
tacatggacctgagggatggcaggatgctcatcaagctgctggaggtcctttctggggag
aaactgccgaagcccaccaaaggcaggatgcgtattcactgcctggagaacgtggacaag
gctctgcagttcctaaaggagcagcgagttcacctggagaacatgggatctcacgacata
gtagatgggaaccaccgactaacactgggactcatctggaccatcatcctgcgcttccag
gtgagagttgtccaggtgttggataacgccattgagactgagaagatggttgagaagtac
gagtcactggcttctgacctgctggagtggatcgaacagaccatcatcatccttaacaac
agaaagtttgccaactctctggtgggagtccagcagcagctacaggcttttaacacctac
cgaacagtggagaaacctcccaagttcacagagaagggaaacctggaggttctgctcttc
accattcagagtaagatgagagccaacaaccagaaggtctacatgccgcgcgagggaaaa
cttatctcagacatcaacaaggcctgggaaagactggaaaaagcagagcatgagagggag
ctggctctgcggacggagctgattcgtcaggaaaaactagagcagctcgccagacgcttt
gaccgcaaggcggccatgagggagacctggctcagtgaaaaccagaggctggtgtctcag
gataactttggcttcgacctccaagccgtggaggccgccaccaaaaagcacgaggccatc
gagacagacatcgcagcgtatgaggaacgcgtccaggctgtggtcgccgtggcgaaggag
ctggaggtggagaattaccacgacattaaacgcatcatagccaggaaggacaacgtgatc
cggctctgggagtacctgttggagctgctaaaggcccgcagacagagactggagatgaac
ctgggcctacagagagtctttcaggagatgctctacatcatggactggatggatgagatg
aagatgctgctgctgtctcaggattacgggaagcatctgttgggagtggaagacctgcta
cagaaacacgcactggtggaagccgacatcgccatccaggccgacagagtgaaggccgtc
atcaacaacgccaacaagcactcggtgaccgacagtggctacaagccctgcgatcctcag
gtcatccaggaccgggtggcccacttggagttctgctaccaggagttgtcacagctggct
gccgaacgtcgtgcccgtcttgaagagtctcggcgactgtggaagttcttctgggagatg
gcggaggaagagggctggatccgggagaaggaacagatcctgtcctccatggagcatggt
aaggacctgaccggggcggtgcgactcctgagccaacagagggcacttgaagatgagatg
agtggacgagctggacacctgcaacacaccatcgcagagggccaggccatggttgatgct
ggtcactttgccgccacaaagatccaggagcgtatctcagacctgcaggctcagtgggca
gctctggaacagcttgcggcagcaagaaagaagagactggaagaagctctggctatgcac
cagtttcaggctgatgcagacgatgttgatgcctggacactggatgctctgcgtattgtc
tccagtggagagacaggccacgatgaattctccacccaggctctggtcaggaagcacaag
gacgcagcggcggaggttgaaagctaccgtacggtcatcgactctctgcatgaacaggct
gccctgctgcccaaagaggagatggagtcagaggatgtgcaaggacgattggctggtatc
gaggagcgctacaaggaagtgtcagagctgacgaagctgaggaagcaggccctgcaggat
gcgctggctctttacaaaatgatgagtgaggccaatgcctgcgaggtttggattgacgag
aaggagcagtggttgaacagcatggagattcctgaaaagctggaggacctggaggtgata
cagcacaggtttgagaatctggagccagagatgaacagccaggcgtctcgggttgctgtg
gtgaaccagatcgcccgacagctgattcacagtggccatccaagcgagaaggacatcaag
acccaccaggataaactaaataataggtggagccagttccgagacctggtggaccagaag
aaggagtccctgaactccgccctgggtgtacagaactaccaccttgaatgcaatgagacc
aagtcttggattaaagaaaagaccaaactaatagagtctacccaagaactgggaaatgac
ctcaccggggtcatggctctgcagaggaaattgaccggcatggagcgagacttggtggca
atcgaagacaagcttagtgatctgcaaggtgaagcccaaaggctggccgaggagcaccct
gaccaggctaaagccatcacagaccggctggctgagattactgccgtctgggaggaaatg
aagaataccctgaaaacgcgagaggagtccctgggcgaagcccggaagcttcagcagttc
ctgcgtgagctcgacgacttccagtcctggctgtctcgtactcagacagccatcgcctcc
gaagacatgcccaacacattgtccgaggccgagaagctgatggcacaacatgaaggtata
aaaaatgagatcaataactacgaagaggactatcagaagatgcgagacatgggggagatg
gtgacgcagggccaggcggatgcgcagtacatgttcttgcggcagcgactgcaggcactg
gacacgggctggaacgacctgctcaaaatgtgggagaatcgtcagaatctgctgtcccag
tcttacgcttaccagctgttcctaagggacaccaagcaggcggaggctttcctcaacaac
caagagtatgttctggctcatacagagatgccaaccacgctggagggcgctgaggctgca
atcaagaagcaggaagacttcatgaccacgatggatgccaatgaggagaagatcaacggt
gtgttggaggcaggcagaaggctggcgagtgatgggaacatcaatgctgagcgcatcctt
gagaaggtggcctccatcgatgacaggcataagaagaacagggaggctgcggtggagttg
ctgatgaggctgaaggacaaccgcgatcttcagaagtttctgcaagactgccaggagctg
tctttatggatgagtgagaagatgctgacggcccaggacatgacctatgacgaggccagg
aacctgcatagcaagtggctgaagcaccaggccttcatggctgagctgcagtccaacaaa
gagtggctagacaagatccagaaggatgggatgctgctggtgtcagagaagccagagaca
gaggctgtggtgaaggaaaagctttcctcgctcaacaccttgtgggaaaacctggagtcc
acgacgcagaccaaagctcagtgtctgtttgatgccaacaaggccgagctgtttacgcag
agctgtgctgacctggacaagtggctgggcagcctggaagggcagatccagtccgacgat
tacggcaaagacctgacatccgtcaacatcctgttgaagaaacagcagatgctagagaac
caggtggatgtgcgtcagagggaagtggtggagttgcagagtcaagtgaaagcgctcggt
caggaggtgaaggacacggatgaggtggacggacgaaggcaggtggtggaaaagaagttc
caggagcttctggagccgctgcggcgtcgcagggacttcctggtggcatccagagaggtc
catcagttcaaccgcgacgtggaggatgagatcctctgggctcaggaacggatccctgta
gctacatccaaggaccatggacacaacctgcagacagtccagctgcttataaagaagaac
cagacgctccagaaggagatccaaggacatcagcctcgcatcaatgacatcatggagcgc
agccagagcctcttgcaggacaagtcctccaatgctgatgtgatccgacagcgcctggtg
gaactgcagcagctgtggaagcagctgatggaggaggtggagcagcggcacggccggctg
caggaggcccacaaagcccagcagtactacttcgacgccgcagaggctgaggcatggatg
agcgaacaggaactctacatgatgtcagaggaaaaagctaaggatgagcagagcgccgtc
accatgctaaagaagcatcagatcatggagcaggctgtggaggactatgcagagaccgtc
caccagctgtccaagaccagccgaggacttgtggccgacggacaccctgaaagcgagcgg
atcagcatgcggcagtctcaggtggacaagctgtacgccggcctgaaggacctgtctgag
gagaggcggggaaagctggatgagaggctccgccttttccaactgaacagggaggtggac
gacctggagcaatggattgcagagcgagaggtggtggccgggtcgcacgagctgggtcag
gattacgaacatgtcacgatgctgcaggaacgtttccgggagtttgcacgggacactggg
aacatcggacaggagcgggtggatggcgtgaaccggctggcagacgagttaatcaacagc
gggcacggagatgctgccacggtggcggagtggaaggacggactgaacgaggcttgggct
gacctgctcgagctcatcgacactcggacacagattctggccgcctccttcgagctccac
aaattctaccacgatgccaaggagatcctgtcacgcatcgccgacaagcagaagaagctg
ccggaagaggtcggccgggaccagaacacggtggagacgctacagaggatgcacaacacc
ttcgaacacgacatccaggcgctgggaacacaggtgaggcagcttcaggaggacgccgcg
cgcctacagtctgcatatgccggagacaaagctgacgacatccagcgccgggaggctgag
gtgctggaggcttggaggaccctgctggaggcctgcgatggacgcaggatccgcctcctc
gacaccggagacaagttccgattcttcagcatggtgcgggacctgatgctctggatggac
gacgtgatccggctcatcgaagcccaggagaaacccagagacgtttcgtcagtggaactg
ctgatgaacaaccatcagggaatcaaggcagagatcgacgcccgtaacgacagcttcacc
acctgcatcgagctgggcaaagccctgctggccaggaagcacttcgcttcagaagagatc
aaggagaagctgctgcaactcaccgataagaggaaagagatgatcgataagtgggaggac
cgctgggagtggctccgcctcatcctggaggtccaccagttctcgcgagacgctggagtg
gccgaggcctggctgctgggccaggagccgtacctgtccagcagagagatgggccagagc
gtggacgaggtagagaagctcatcaagcgccatgaggcctttgagaagtccgccgccacc
tgggaggagcgcttctctgccctggagaggctgaccacgctggagctgctggaagtaaga
agacagcaggaggaggaggagaggaggaggaagcccccgactccggagccggccgtggtc
cagcaagaggaagctcagcagcagagcgctgtcactcagaatggactcccatcggatcag
gatcaagactctcctaaggatgtcggggaaggtggcggtctggtcaacgggattgtcgag
cgcagctccaaggagccgagccccagccactcgccatcctcgggacggaaggccaaaaac
agccagtcctccacgctgcccgcccagaaccaggactcaccctcacagctcgaagctttc
ctgcatcgcaaacacgagtgggaggggcacaataagaaagcctccaacaggtcctggcac
aacgtgtactgcgtcatcagaaaccaggaactgggcttctacaaggacagcaaggcggca
agtcagggcgtgccgtaccacggcgagctgcccgtcagcctgaaagacgccacctgtgat
gtcgcatcagactataaaaagaaaaaacacgtcttcaagctcagaatctctgatggaaat
gagttcctgttccaagccaaagatgaagaggagatgagtaactggatccaggttgtcctg
aacgccgccaccactgagcgatccgaagtccagggcagtaaccccggcacgccgtccacc
gggcgcgctcagacgctcccggccagcgtgtcgctcaccactgagtccagtcctggaaag
agagagaaggacaaggagaaggagaaagagaaacggttcagcttgttcagcaagaagaag
cagtag
DBGET
integrated database retrieval system
