Cyprinodon variegatus (sheepshead minnow): 107082773
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Entry
107082773 CDS
T06110
Name
(RefSeq) tropomyosin alpha-1 chain-like isoform X1
KO
K10373
tropomyosin 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04260
Cardiac muscle contraction
cvg04261
Adrenergic signaling in cardiomyocytes
cvg04814
Motor proteins
cvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
107082773
04820 Cytoskeleton in muscle cells
107082773
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
107082773
04261 Adrenergic signaling in cardiomyocytes
107082773
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvg04812
]
107082773
04147 Exosome [BR:
cvg04147
]
107082773
Cytoskeleton proteins [BR:
cvg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
107082773
Exosome [BR:
cvg04147
]
Exosomal proteins
Exosomal proteins of microglial cells
107082773
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
TMF_DNA_bd
Crescentin
Lebercilin
ERM_helical
DUF3450
PUMA_CC
ATG16
Nuf2_DHR10-like
DUF745
CENP-F_leu_zip
Laminin_I
SlyX
DUF16
DUF1664
Motif
Other DBs
NCBI-GeneID:
107082773
NCBI-ProteinID:
XP_015227096
Ensembl:
ENSCVAG00000003913
UniProt:
A0A3Q2CCT9
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAESDKKASEDRSKQLEDDLVALQKKLKGTEDELDKY
SEALKDAQEKLELAEKKATDAEGDVASLNRRIQLVEEELDRAQERLATALTKLEEAEKAA
DESERGMKVIENRAMKDEEKMELQEIQLKEAKNIAEEADRKYEEVARKLVIIEGDLERAE
ERAELSESKCSELEEELKTVQNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatcaagaagaagatgcagatgctcaagctcgacaaggagaatgccttggac
agagctgagcaggccgagtcagacaagaaagcatctgaagacagaagcaaacagcttgag
gatgacctggtagcattgcagaagaagctgaagggaactgaggatgagttggacaagtac
tctgaggccctgaaggatgcccaggagaaactggaactcgctgagaagaaagccacagac
gctgagggtgatgtagcctccctgaacagacgcatccagctggttgaggaggagttggac
cgagcccaggagcgtctggccacagctctgaccaagctggaggaggctgagaaggctgct
gatgagagtgagagaggtatgaaggttattgagaacagagcaatgaaggatgaggagaag
atggagcttcaggagatccagctgaaagaggccaaaaacatcgctgaggaggctgaccga
aaatatgaggaggtggcccgtaagctggtgatcattgagggtgacctggaacgtgcagag
gagcgtgccgagctgtctgagagtaaatgctctgagcttgaggaggagctgaagaccgtg
cagaacaacctgaagtctctggaggctcaggcagagaagtactcacagaaggaggacaag
tacgaggaggagatcaaggttctcacagacaagctgaaggaggctgagacccgtgcagag
ttcgctgagagatcagtcgccaagctagagaagaccatcgatgatctggaggacgagctg
tatgcccagaaactgaagtacaaggccatcagcgaggagctggaccatgccctcaacgac
atgacatccatctaa
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