Cyprinodon variegatus (sheepshead minnow): 107082784
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Entry
107082784 CDS
T06110
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107082784 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107082784 (herc3)
Enzymes [BR:
cvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
107082784 (herc3)
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
HECT type E3
107082784 (herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
107082784
NCBI-ProteinID:
XP_015227126
Ensembl:
ENSCVAG00000003160
UniProt:
A0A3Q2DNB2
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MLCWGNARDGQLGIGAERNPAFEPRNCRVFSGRGLKEVACGGQHTLFLLHDGSVYTCGSN
SCGQLGHNRDGTSPELVGALDTQKITMVSCGRTHSMAINEQGQVFTWGAGEGGQLGLGTT
EAVVRIPRLVKRLCDHSISQVMCGNQHCIALSRDGQLFTWGQNTNGQLGLGKGEPSKLTP
HPLKSLAGIPLAQISAGGDHSFALSLSGAVFGWGKNRAGQLGLNDRQDRAVPCHIKFLRS
QKVVYISCGDEHTAALTKDGGLFTFGDGSRGQLGHGASNNELLPRRVLELMGTEVSQIAC
GRHHTLALVPSSSVVYAFGCNSHGQLGTGTLGDSRSPLPVKSAFLTGNLQRRGDSRNCIV
LKIICGGDHSFLLYSNEQSSAVSEDFRVVNVSKSLSPINYEQLNSWRLKLMYNTDSSVAN
DIVIQLSSTACWNASFLDQSDDAHFRTNPKIPGIDLNSVRMLFQVLSTPAFSGLLEQATK
SFESLLIPQLPRSPPDVEAMRIFLILSEYPALQDSNNYIRLTIPLAMAILRLDTNPSKVL
DNWWCFMDDSFFTRMVDMYKSIVVFMLTGGKTIMVPIFYENYFLATLRLLEKLHKVNLKA
NHVEYSRFYIPDITSLVDIQGDYLKWFLRKAEIKMGSSPSQQKDSASVNLCAFPFILNAQ
AKTTMLQTDAELQMQMAVSGANLHNVFMLLTLEPHLARNPYLVLHVRRDHLVSDTLRELT
MYSDVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLDPVYGMFTHYNESNLLWFSDK
CFVEQNWFHLIGIVCGLAIYNATVVDLHFPLALYKKLLNVSPSLEDFKELSPTEARSLQQ
LLDYEGGDIEETFLLNFAITRENYGMTETKELVPGGEDITVDKNNRKEFVEAYLRYVFSD
SVSEQYSAFSSGFLKVCGGEILSLFQPSELMAMVVGNNNYNWEEMEKNAVYKGEYSATHP
TVRFFWEVFHEFSLEKKKQFLLFLTGSDRIPIHGMESLRIVIQSTTAEEDYLPVAHTCYN
LLDMPRYQTKEILQRRLTQAVEQYEGFSLV
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgttgggggaacgccagggatggacagctgggcattggcgcagagaggaaccct
gcgtttgagcccaggaactgccgcgtgttcagtgggcgaggacttaaggaggttgcatgt
ggagggcagcacacgctgttcctgctgcatgatggtagcgtgtacacatgtggctccaac
agctgtgggcagctgggccacaacagagatgggacgtctccagagctggttggcgctctt
gatacccagaagataacgatggtgtcatgtggtcggacccattccatggccataaacgag
cagggtcaggtgttcacctggggagccggcgaagggggccagctgggcctggggaccacg
gaggcggtcgttcgaattccaaggttggtcaaacggctttgtgaccacagcatttctcaa
gtaatgtgtgggaatcagcactgcatcgcactttccagagatggtcagctgttcacctgg
ggccagaacactaacggtcagcttggtctgggtaaaggagagcccagcaagctgacgcct
catcctctgaagtctctggcagggattcctctggcccagataagcgccgggggtgaccac
agttttgccctttccctgtctggagccgtctttggatggggcaaaaacagagcgggacag
cttggtcttaatgacagacaagatcgagccgtaccgtgtcacatcaaattcctcaggtcc
cagaaagttgtttatatcagctgtggagatgagcacaccgcagccctcacaaaggacgga
ggcctgtttacgtttggggacggctcacgggggcagctgggtcacggcgccagcaataac
gagctcctaccaagacgagtgctggagttaatgggcactgaggtttcccagatcgcctgt
ggaaggcaccacaccctggccttagtcccatcgtccagcgtggtgtatgcattcggttgc
aacagccatggacaactggggacgggaaccctgggggactcaagaagcccacttcctgtc
aagtcagcttttcttactggaaacctgcagagaagaggggactcaaggaactgcattgtt
ctaaaaatcatctgtggaggagatcatagtttcttgttatattccaatgagcagagttct
gctgtctcagaggacttcagagtggttaatgttagtaaaagcctctcccccatcaactat
gaacagttaaattcgtggagattaaaactgatgtacaacacagactctagtgtggcaaat
gacattgtgattcagctctcctcgacagcgtgttggaacgccagcttcctggaccaaagt
gatgatgctcacttcagaaccaacccaaagatcccgggtattgatctgaactctgtcaga
atgctgttccaggttctcagcacaccagccttctctggactgctggagcaggccaccaag
agtttcgaaagcctattaattccccagctgccacgctcgccacctgatgtcgaagccatg
aggatcttcctcatcttgtccgagtaccccgccttgcaggactccaacaactacatccga
ctcactattcccctggcgatggccattctccgactagacaccaatcccagcaaagtattg
gataactggtggtgctttatggatgacagcttcttcaccagaatggttgacatgtacaaa
agcattgttgtgttcatgctgactggcggcaagacgatcatggtacccatcttctacgag
aactatttcctggccacattgcggctgctcgagaaactccacaaggtgaacctaaaggct
aaccacgtggaatacagtcgcttttatatccctgatatcaccagtctggtggacatccag
ggagactacctcaaatggtttctgagaaaagctgagattaaaatgggctcatccccttcg
cagcagaaagactctgcctcagtgaacctctgtgccttcccgttcatcctgaatgcccaa
gccaagacgacgatgctgcaaacagacgctgaactgcagatgcagatggcagtcagcggt
gcaaaccttcacaacgtctttatgctgctcacgctggagccccacctggctagaaaccca
tatctggtgctccatgtgcgcagggaccatttagtcagcgacacgctgcgggagctcacc
atgtactctgatgtggaccttaagaagccactcaaggtgatctttgatggcgaggaggcc
gtggatgcaggcggcgtcactaaagagttcttcctgctgctgctgaaggagcttctggat
ccggtctatgggatgttcactcattacaatgaatccaacctgctgtggttctcagacaaa
tgttttgtggagcagaactggtttcatctgatcgggatcgtctgcggtctggccatctat
aacgccacggtggtggatctgcactttcctctggctctctacaagaagttactgaacgtg
tcgccttcactggaggactttaaagagctgtcgcccactgaggccaggagtcttcagcaa
cttctagactatgaaggaggagacatagaagagacgtttcttctcaactttgctatcacc
agggaaaactatgggatgacagaaaccaaggagttggttcctggaggagaagacatcact
gtggacaaaaacaacaggaaggagttcgtggaggcctaccttcgctacgtgttctcagac
tcggtgagcgagcagtactcggccttctcctctggtttcctgaaagtgtgtggaggggag
atcctgtcgctctttcagccctcggagctgatggccatggtggtcggtaacaacaattac
aactgggaggagatggaaaagaacgctgtctacaaaggggagtactccgccactcacccc
accgtccgatttttctgggaggtttttcatgagttctccctggagaagaagaagcagttt
ttattgttcctgacgggcagcgaccgcatccccatccacggcatggagagcctccggatt
gtcatccagtccaccacggcagaggaagactacctgcccgtggctcacacttgctacaac
ctcctggacatgccccgctaccagaccaaagagatcctgcaacgccgcctcactcaggct
gtggagcagtacgagggcttcagcctggtctga
DBGET
integrated database retrieval system
