Cyprinodon variegatus (sheepshead minnow): 107082789
Help
Entry
107082789 CDS
T06110
Symbol
tbc1d9
Name
(RefSeq) TBC1 domain family member 9
KO
K19951
TBC1 domain family member 8/9
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107082789 (tbc1d9)
Membrane trafficking [BR:
cvg04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
107082789 (tbc1d9)
Endosome - Golgi transport
Rab GTPases and associated proteins
107082789 (tbc1d9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
107082789
NCBI-ProteinID:
XP_015227135
Ensembl:
ENSCVAG00000003333
LinkDB
All DBs
Position
Unknown
AA seq
1274 aa
AA seq
DB search
MWVIPEDVLLAGALWVTERANPFFILQRRKGHGGGGGGGGGGGGGLAGLLVGTLDVVLDS
SARMAPFRILYQTPDSLVYWIIAHGTSRKEITEHWEWLEHNLLQTLSIFENENDITTFVK
GKVQGIIAEYNKNHDVKEDDDTDKFKEASSKFRKLFVMPEEEKLVNYYSCSYWKGKVPRQ
GWLYLSINHLCFYSYLLGKEAKLVVRWADITQLEKSATLLLPDVIKVSTRTNEHVFSVFL
NINETFKLAEQLANIAMRRLLDNKGFELDRSLPKLKKKSPKKVSALKRDLDARAKSERYR
ALFRLPKDEKLDGHTDCTLWTPFNKMHILGQMFVSTNYICFTSKEETLCSLIIPLREVTI
VEKADSSNVLPSPLSISTKNRMTFLFANLKDRDFLVQRISDFLQQTTSKIYLERELNSSD
DEVSSHHGSLLSCSPQQSLASEVERTFNLNHSSVPTASEALMTVYRRRSPEEFNPKLAKE
FLKEQAWKNHFTEYGEGVCMYRTEKTKELVLKGIPESMRGELWLLFSGAINEMATHPGYY
EDLVEKSMGKYNLATEEIERDLHRSLPEHPAFQNEMGIAALRRVLTAYAFRNPNIGYCQA
MNIVTSVLLLYAKEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELAREYVPQLYD
CMQDLGVISTISLSWFLTLFLSVMPFESAVVVVDCFFYDGIKVIFQLALSVLHANIHQLL
GCKDDGEAMTVLGRYLDSVTNKDSTLPPIPHLHSLLTDNGEPHPEVDIFRLVRSSYEKFG
FIRADVIEQMRFKQRLRVIQTIEDTTKRNVVRTIVTETAFSIDELEELYVLFKAEHLTSY
YWGGSNNPTERHDPSLPYLEQYRINVEQFKGLFSLLFPWSNGNHSDPLAARFFRLLDQNG
DALINFRDFINGLGVLCHGDLTEKLKLLYKMHVLPEILHEQEEPDSAFEATQYFFEDITP
ETSISRDSKGRGEKDDGFVRVTFKTEKVKKLSTPDYRHYLKLWNEETKPKQESTKDLPKL
NQSQFIELCKTLYSMFSEDIAEQELYHATATVTSLLLEMGEVGKLFSSCSKKDAIQEGKS
HSSSRDLLDLKPTEDALDLGDIFIPAGLEDKSSSREEVQVHDASEDLPPMQDIKLEDSSL
KEAGTSSAMLISDDETKDDTSMSSYSVLSAGSHELDDKLQCEDIAEDTVLVRSDNRPERS
SHLGDRRLPHSTSIDKDWAITFEQFLASVLTEQALVQYFEQPVDVASRITNAKNVQKVGR
PRLSTSDYEISLSG
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtcattcctgaagatgtgctgctggccggagcgctgtgggtcaccgagagggcg
aacccgttcttcatcctgcagagacggaagggccacggaggaggaggaggaggtggagga
ggaggagggggagggctggccggtttgctggtgggaactttggatgtggttcttgactca
agtgctcgtatggccccattccggatcctctaccagactcctgattctttggtgtactgg
atcatcgctcatggaacctctcgtaaagagatcacggagcactgggagtggctggaacac
aacctgctgcagacactgtccatattcgagaacgagaacgacatcaccacctttgtcaag
gggaaggtgcagggtatcatcgccgagtacaacaagaaccatgacgtcaaggaggacgac
gacactgacaagtttaaggaggcgagctccaagtttcggaaactgtttgtgatgccagag
gaggagaagctggtcaattattactcctgcagctactggaaggggaaggttcctcggcag
ggatggctctaccttagcatcaaccacctctgcttctactcatacttactgggaaaagaa
gccaagctagtggttcgctgggctgacatcacgcagctggagaagagtgccaccctcctc
ctccctgatgtcatcaaggtgagcacgcgcaccaatgagcacgtgttctccgtcttccta
aacatcaatgagaccttcaagctggcagagcaactggccaacattgccatgcggcggctg
ctggacaacaaaggcttcgagctggaccgatcgctgcccaagctaaagaagaagtcaccc
aagaaggtttcagctctgaagagggatctggatgcaagagcaaagagcgagcgctaccgg
gctctctttcgtctgcccaaagatgaaaagttggatggacacacagactgcacgctgtgg
actcccttcaacaagatgcacatcctgggccagatgtttgtttccaccaactacatctgc
ttcaccagcaaggaggagacactatgcagcctcattatcccgctgcgggaggtgaccatt
gtggagaaggcagacagctcaaacgtgctgcccagtccgctctccatcagcaccaagaat
cgcatgactttcctgtttgccaacctgaaggacagagacttcctggtgcagaggatctcc
gacttcctgcagcaaaccacctccaagatttacctggagagggagctgaacagctcggat
gacgaggtttcctcccatcacggctccctgctctcctgcagccctcagcagagtctggct
tcagaggtggagcgcaccttcaacctgaaccacagcagcgttcccacggcctcagaagcc
ctgatgaccgtgtaccgccgccgctccccagaggagtttaatcccaaactagcgaaggag
ttcttgaaggagcaggcgtggaagaaccacttcacggagtacggagagggggtgtgcatg
taccgcacggagaagacaaaggagctggtcctcaaaggcatcccagagagcatgagagga
gagctgtggctgcttttttcaggagccatcaatgagatggcaacccaccctggatactac
gaagacctggtggagaagtccatggggaagtacaacctggccacagaggagattgagcgg
gatctgcaccgttcgctgccggagcatccggccttccagaacgagatgggcattgccgcg
ctgcgaagggtcctaacagcctacgccttcaggaatcccaacattggatactgtcaggcc
atgaacatcgtgacgtcagtgctgctgctttatgctaaagaagaagaagctttctggctc
ctggttgctctctgtgagcggatgctgcctgactactacaacaccagggtcgtaggggcc
cttgttgatcagggggtgttcgaggagctcgcccgcgagtacgtcccccagctttacgac
tgcatgcaggacctgggggttatatccacaatctcgctctcctggttcctcaccctcttc
ctctccgtcatgccgtttgagagtgccgtggtagtggtggactgcttcttctatgacggc
atcaaggtcatctttcaactggcgttgtctgtgctgcacgctaacatccatcagctgctg
ggctgcaaggatgatggagaagccatgactgttctgggcaggtacctggacagtgtgact
aataaggacagcaccctgcctcccattccccacctccactctctgctcaccgataacgga
gaaccacacccagaggtggacattttcaggctggtccgcagctcctacgagaagtttggg
ttcatccgggccgacgtgatcgaacagatgcgtttcaagcagaggctgagggtcattcag
accattgaagacaccaccaaacgtaacgtggttcggaccatagtaacagagacggctttt
agcatcgacgagctggaggagctttatgtgcttttcaaggcagagcacctgaccagctac
tactggggtggcagcaataaccccactgagcgccacgacccgagcctaccgtacctggag
cagtaccggatcaacgtggaacagtttaaaggcctgttcagcctgctgttcccctggtcc
aacggaaaccactccgacccgctggccgctcgtttctttcgcctccttgaccagaacgga
gatgctctcatcaacttccgggacttcatcaatggcctgggtgttctatgtcatggggat
ctgacggagaagctgaagctcctctacaagatgcacgtgttacctgaaatcctccatgag
caggaagagccagactcggcctttgaagccacacagtacttctttgaagacatcacccca
gaaacatccatcagtcgagattcaaagggcagaggcgaaaaggatgatggctttgtcaga
gttacattcaagactgaaaaagtgaagaaactgagtactcctgattaccgtcactacctg
aagctgtggaacgaggagaccaaacctaaacaagaaagtacgaaggacctcccaaagctt
aaccagagtcagttcattgagctctgtaagaccctctacagcatgtttagcgaggacatt
gctgagcaggagctctaccacgccactgccaccgttaccagtctgttgctggaaatggga
gaagtggggaagctcttttcctcatgcagcaagaaggatgccatccaggagggaaagtcc
cactccagctccagagacttactggatctcaaacccaccgaggatgctctggatttggga
gacatttttatcccagcaggtctggaggacaaatccagctcccgtgaagaggtgcaagtg
catgatgctagtgaggaccttccaccaatgcaggacatcaagctagaagactcgtccctt
aaggaggcgggaacatcatcggccatgctcatctctgacgatgaaaccaaggacgacacg
tcaatgtcctcatactctgttctgagcgccggctcccacgagctggacgacaagctgcag
tgcgaggacatcgctgaagacacggttctggtgcgcagcgacaaccggcctgaacggagc
agccatcttggcgaccggaggctgccccacagcaccagcatcgacaaagactgggccatc
acctttgagcagtttctggcctccgtcctcactgagcaggctctggtgcagtactttgag
cagccggtggacgtggcgtctcgaatcacaaatgccaaaaatgtgcagaaggtggggcgc
ccccggctgtccaccagtgactatgagatctctctgtccggctga
DBGET
integrated database retrieval system
