Cyprinodon variegatus (sheepshead minnow): 107082852
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Entry
107082852 CDS
T06110
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-2-like
KO
K04804
nicotinic acetylcholine receptor alpha-2
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107082852
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107082852
Ion channels [BR:
cvg04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
107082852
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
107082852
NCBI-ProteinID:
XP_015227224
Ensembl:
ENSCVAG00000023091
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MISIHLFLRGTVIFWTLLLGHSVFGHVKTHSHAEDELFKTLFSGYNKWSRPVPNISDVVI
VKFGLSIAQLIDVDEKNQMMTTNVWLKQEWNDYKLRWRPSDYDNVTSIRVPSELIWVPDI
VLYNNADGEFAVTHMTKAHLFHTGKVRWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWT
YDKAKIDLERIENTVDLNNYWESGEWAIINAVGTYNTKKYDCCHEIYPDITYFFIIRRLP
LFYTINLIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVI
PLIGEYLLFTMIFVTLSIVITVFVLNVHHRSPSTHKMPRWVHSVFLDLIPRWLFMRRPAP
DGRRRRLLLLQQEIAAERRQIQIAGYESSHCISTSYTWMREGSLKKLKNPERSSYEDLEL
GTLTSYFSFRPPSPRPPESSPPMQQKKSQNCQDLQDGVAGLTRQPTAARLNSTQKPSKGD
SSVSESPFILSPSVMRALQGVHYIADHLRAEDIDFSVKEDWKYVAMVIDRIFLWMFIIVC
LLGTIGLFLPPWLAGMI
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgatttccatccacctgttcctgagagggacggtcattttctggacgctgcttctgggt
cattcagtttttggtcatgtcaagacccactctcatgcagaagatgagctctttaagacg
ctgttctctggttacaacaagtggtcaagacctgtgccaaatatctctgatgtggtcatt
gtcaagtttggactgtccattgcgcagctaattgatgtggatgaaaagaatcaaatgatg
actactaatgtgtggctaaaacaggagtggaatgactacaaacttcgctggaggccatca
gactatgacaacgtaacatcgatccgagttccatcagagctcatatgggtaccagatata
gtcctttataacaatgctgatggggagtttgctgtgacccatatgaccaaagctcacctc
ttccacaccggtaaagtgcgttgggtcccgcctgctatttacaaaagctcctgcagtatc
gacgttaccttcttcccctttgatcagcagaactgtaaaatgaaatttggctcctggacc
tacgacaaagccaagatcgacctggagcggatagaaaacactgtggatcttaacaactac
tgggagagtggtgaatgggcaatcatcaatgctgtgggaacatacaacacaaagaaatat
gactgctgccatgagatctacccagacatcacttacttcttcatcattcgaagacttccc
ttattttataccatcaacctcatcattccctgcttattgatctcctgtctcactgtttta
gtcttctacttgccctctgactgtggggagaagatcactctatgtatctcagtcctttta
tcccttactgtgtttctcctgctcataacagagataataccctcaacatctctcgttatc
cctctcatcggcgagtacctcctcttcaccatgatttttgtcaccctgtcaattgtcatc
actgtatttgtgcttaatgtgcaccatcgctcacccagcactcacaagatgccccgctgg
gttcactccgtgtttctggacctgatcccacgctggttgttcatgcgcaggccagcgcct
gacggtcggcgccgcaggctgctgctgctccaacaggaaatagcagcagaacggcgacaa
attcaaatagcggggtacgaatcgagccactgcattagcacctcatacacctggatgaga
gaaggaagcctgaaaaagctgaaaaacccagagcgaagcagttatgaggatttagagctt
ggaacactgacatcatatttctctttccgccccccgtctccaagacctccagagtccagt
cctccaatgcaacagaaaaaaagccagaactgccaagacttgcaagatggtgttgcagga
ttaaccagacagccaacagcagccaggctcaactcaacccagaaaccctctaaaggggac
agttcggtgtcagagtcacctttcatactttctccaagcgtaatgcgtgctttacaaggg
gtccactacattgcagaccacctgagagctgaagatatagactttagtgtgaaagaggac
tggaagtacgttgccatggttattgatcggatcttcctgtggatgttcattattgtgtgc
ctgcttggaacaataggcctcttcctacccccatggttagctggtatgatttag
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