Cyprinodon variegatus (sheepshead minnow): 107082980
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Entry
107082980 CDS
T06110
Name
(RefSeq) protein argonaute-1 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107082980
03036 Chromosome and associated proteins [BR:
cvg03036
]
107082980
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107082980
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107082980
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
107082980
microRNA pathway
RISC loading complex
107082980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
107082980
NCBI-ProteinID:
XP_015227367
Ensembl:
ENSCVAG00000018173
LinkDB
All DBs
Position
Unknown
AA seq
895 aa
AA seq
DB search
MEPGAAGAVPLGVFPPPLQQVFHAPRRPGMGTVGKPIKLLANYFEVEIPKMDVYHYEVDI
KPDKCPRRVNREVVEYMVQHFKPQLFGDRKPVYDGKKNIYTVLALPIGSEKVDFEVTIPG
EGKDRIFKVSIRWLAKVSWRLLQETLVSGRLQVPLDSVQALDVAMRHLASMRYTPVGRSF
FSPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIR
NIDEQPKTLTDSQRVRFTKEIKGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLESG
QTVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQT
STMIKATARSAPDRQEEISRLMKNANFNLDPYIQEFGIKVKDDMAEVTGRVLPAPILQYG
GRVNAAHLSVPLQQLNDMFFPNHNKLNLGWVARFFSSMQNRAIATPNQGVWDMRGKQFYN
GIEIKVWAIACFAPQKQCREEVLKNFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPM
FRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLC
LKINVKLGGINNILVPHQRSAVFQQPVIFLGADVTHPPAGDGKKPSITAVVGSMDAHPSR
YCATVRVQRPRQEIIEDLSYMVRELLIQFYKSTRFKPTRIIFYRDGVPEGQLPQILHYEL
LAIRDACIKLEKDYQPGITYIVVQKRHHTRLFCADKSERIGKSGNIPAGTTVDTSITHPF
EFDFYLCSHAGIQGTSRPSHYYVLWDDNRFTADELQILTYQLCHTYVRCTRSVSIPAPAY
YARLVAFRARYHLVDKEHDSGEGSHVSGQSNGRDPQALAKAVQIHHDTLRTMYFA
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggagccgggagcggctggcgctgtgcccttgggggtcttccccccacccctgcagcag
gtgtttcatgcccctcggcggccaggcatgggcaccgtgggcaagcccatcaagctgctg
gccaactactttgaagtggaaatcccaaagatggacgtctatcactatgaggtggacatt
aagcctgacaagtgcccacggcgagtcaacagagaggtggtggagtacatggtgcaacat
ttcaagccgcagctctttggtgacaggaaaccagtatatgatggcaagaagaatatttac
accgtcctagcacttcctattgggagtgagaaggtggattttgaggtaaccatccccggt
gagggtaaagatcgaatctttaaggtttccatccgctggctggccaaagtatcatggcgg
ctgctgcaggaaactcttgtaagcggccggctacaagtcccccttgactcagttcaagcc
ttggatgtggccatgcgtcatttggcctctatgaggtacactccagtgggtcgttctttc
ttctccccacctgaaggatactaccacccacttggcggggggagggaggtctggtttggc
ttccatcagtcagtgcgtcccgccatgtggaagatgatgcttaacattgacgtgtctgcc
acggccttctacaaagcccagcctgtgatcgagttcatgtgtgaggttttggacattcgc
aacattgatgagcagccaaagactctcacagactctcagagggttcgcttcacaaaggaa
attaaaggcctgaaggtcgaggtgacacactgtggacagatgaagagaaagtatcgtgta
tgcaatgtcaccagacgtcctgccagccaccaaacgtttccgcttcagcttgagagcggc
caaacggtagaatgtacagtggcccagtacttcaagcagaagtacaacctgcagcttaaa
tacccccacctaccttgtttacaagttgggcaggagcaaaagcacacctaccttcccttg
gaggtgtgtaacattgtagctggtcaacggtgcatcaagaagctgacagataatcagact
tccactatgattaaagccacggctcgctctgcacccgacagacaggaggagatcagcagg
ctgatgaagaatgcaaacttcaacctggacccgtacattcaagagtttgggatcaaggtg
aaggacgatatggctgaagtgactggcagggtgctgccagctcctattctgcagtatgga
ggacgggtaaatgcagctcatctatcagtaccactgcaacagttaaatgacatgtttttc
cccaatcacaataaactaaaccttggttgggttgcacgatttttttcttctatgcagaac
cgtgccatcgctacacccaaccagggtgtgtgggacatgagggggaagcagttttataat
ggcattgagatcaaagtctgggcaatcgcctgctttgccccacagaaacagtgcagggag
gaggtgctcaagaacttcacagaccagctgcgtaaaatctccaaggatgctggaatgccg
attcaaggccagccgtgcttctgtaaatacgcccagggagccgacagcgtggagccaatg
ttcagacacctgaaaaacacctactctggtcttcagctcatcattgtcatcctgcctgga
aaaactcctgtctatgcggaggtgaaacgtgttggagacaccctccttggtatggccacc
cagtgtgtccaggttaaaaatgttgtaaaaacatcaccgcagacgctatctaacctctgc
ctaaagatcaacgtgaaacttggaggaataaacaacatcctggtccctcaccaacggtca
gctgtgtttcagcagccggttatcttcctgggagcagatgtcacgcaccctccagctgga
gatggcaagaagccctccattactgctgtggtaggcagtatggacgcccatcccagcaga
tactgtgccactgtgcgtgtccagagacccaggcaggaaatcattgaagatctgtcttac
atggtgcgagagctgctcatccagttctacaagtcgacccgcttcaagcccaccaggatt
attttctacagggacggggttcctgagggacagttgccacagattcttcactatgagctt
ctggccatcagagacgcgtgcataaagctggagaaggattaccagcctggcatcacttac
attgtggtgcagaaacgccaccacacacgcctcttctgtgctgacaaatctgaaaggatt
gggaagagtggaaatatacctgcagggactacagtggacaccagcatcactcaccccttt
gagtttgacttttacctgtgcagccatgcaggcatacagggcaccagccggccgtctcat
tactatgtcttatgggacgacaatcgtttcacggcagatgagttgcagattctgacctac
cagttgtgccacacgtacgtccgatgtacccgctcagtctccatccctgcgccggcctac
tatgctcggcttgtggccttccgtgcccgctaccatctggtggacaaagaacatgacagt
ggagagggcagccatgtatctggtcagagtaatggccgggacccccaggcactggctaaa
gctgttcagattcaccacgacacactgaggaccatgtacttcgcctga
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