Cyprinodon variegatus (sheepshead minnow): 107083081
Help
Entry
107083081 CDS
T06110
Symbol
ubtf
Name
(RefSeq) nucleolar transcription factor 1
KO
K09273
upstream-binding transcription factor
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107083081 (ubtf)
03021 Transcription machinery [BR:
cvg03021
]
107083081 (ubtf)
Transcription factors [BR:
cvg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
107083081 (ubtf)
Transcription machinery [BR:
cvg03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
107083081 (ubtf)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_5
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
107083081
NCBI-ProteinID:
XP_015227526
Ensembl:
ENSCVAG00000016431
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MNGEMEVVAQDQVWAQDDLLKLLDAMKVALPQKDVTKYKTSESHLDWQKVAFNSYTAEMC
KQKWLEVSKEIRKFRTLTELIVDAEDYIKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRA
KYAKLHPEMSNLDLTKILSKKYRELPDKKKKKYVEDFLREKEAFVQSMMKFREEHPDLME
SMTKKASNVPEKPKTPQQLWYNHEKKAFLKTHPDATTKDIKDSLGKQWTQLSDKKRLKWI
GKSLEQQKLYEEAMREYIQQHPELNMTQGAMKSTLTKAERHLKDKSDGRPDKPPPNGYSM
FCAELMSNMKDVPSTERMMMCSQRWKLLKQSEKDAYQKRCEQRKKEYEIEMNRFLSTLPE
KEQQRVLGEDKIGFKKNNAAGSPASKKKNAKTNASPEKPKRPISAMFIFAEEKRAKLQQE
RPDLPDSELTRFLARMWNELPDKKKEKYKRVEALLKAESEKKEREDRSRLPDPPKTAQEI
WQQSVIGDYLARFKNDRPKAHKAMETAWSTMEKKEKIMWIKKAAEDQKRYERDLCEMRSP
ANVVAPMKKMKFEGEPKKPPSNGYQKFSQEMLSNGELNHLPMKERMAEIGSRWQRLPLKD
KECYKKIAEEKQRQYKVLLEQWLASLSTQERNIYREYNSQKRRNPAKAGATKAKLKKSDT
EEEDDDEEDDDEQEKASSDADSSSEEDDDDDDDDDDDDDDDNDEDDEEEEDDEVEDKENK
SDDESSSESNSGESSESDSD
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagagatggaggtggtggcccaggaccaagtgtgggcgcaggatgacctccta
aagctgctagatgccatgaaagtggctctgcctcagaaggatgtgacaaaatacaaaacc
tctgagtcccacctggactggcagaaggttgccttcaattcatacacagcagagatgtgc
aagcagaaatggctagaagtctcaaaagagattcgtaaattcagaactctaaccgagctg
atcgtggatgcagaagactacatcaagaacccctacaaaggcaagaagttaaagaaacac
ccagatttccccaagaagcctttgactccatatttccgtttcttcatggaaaagagggcc
aaatatgcaaagctgcatcctgaaatgagcaacttggacctcaccaagatcctttccaag
aaatacagggagctccctgacaaaaagaagaaaaaatatgttgaggacttcttgcgtgaa
aaggaagcatttgtacaaagcatgatgaaattcagggaagaacatccagacctcatggag
agcatgaccaagaaggcttcaaatgtcccagaaaagcccaagacgccccaacagctgtgg
tacaaccatgaaaagaaggcattcctcaagacgcaccctgatgcgaccacaaaagacatc
aaggacagtctcggtaaacagtggacacagctgtctgacaaaaagaggctcaaatggatc
ggcaagtccctggagcagcaaaaactgtatgaggaagcgatgcgggaatacatacagcag
cacccggagctaaacatgactcagggagctatgaagtccaccctgaccaaggcggaacgg
caccttaaagacaagtcggacggccggcctgacaaaccccctccaaatggttactcgatg
ttctgcgctgagctgatgtcgaacatgaaggacgttccgagcacagagcgcatgatgatg
tgcagccagcggtggaagcttctgaagcagagcgaaaaggatgcctatcagaaacgctgc
gaacagaggaaaaaggagtatgaaatcgagatgaacagattcctcagtaccttaccggaa
aaggagcagcagcgagttttgggggaggataagattggttttaagaagaacaacgcagcc
ggcagccctgcctctaaaaagaaaaatgctaaaacaaacgcaagtccagagaaacccaag
aggcccatctctgctatgttcatatttgctgaggagaaacgagccaagctgcagcaggag
cgaccggaccttcctgacagcgagctcaccagattcctggctcgcatgtggaatgagctt
ccagacaagaagaaggagaagtacaaacgcgtggaggctcttctgaaagctgagtctgag
aagaaggaaagggaggataggagtcgtctgccggatccgcccaaaacagcccaagaaatc
tggcaacagagtgttatcggggattaccttgctagatttaagaatgatcgaccgaaagcg
cataaagcaatggaaacggcgtggagcaccatggagaagaaggagaagattatgtggatc
aagaaggctgcagaagaccagaaaagatatgaaagggacctgtgtgagatgcgatcccct
gctaatgttgttgctcctatgaagaagatgaagtttgaaggggaacccaagaagcctcca
tcaaatggataccagaagttctcccaggagatgctgtccaacggggagctgaatcatctc
ccaatgaaggagcggatggctgagatcggcagccggtggcagaggttgccgctgaaggac
aaggaatgttacaagaagatcgcagaggagaagcagaggcagtacaaggtcctcctggag
cagtggctggctagcttgtctacgcaagagcgaaatatttacagagagtacaattcacag
aaaagaagaaatccagcaaaagcaggggcgaccaaggcgaagctgaagaaatctgacact
gaggaggaagacgatgatgaggaagatgatgacgagcaggagaaggcctcctctgatgca
gactcatccagtgaggaggacgatgatgatgacgacgacgatgatgacgacgacgatgat
gataacgacgaggatgacgaagaagaggaggatgacgaggttgaagacaaagaaaacaaa
tcggatgacgaaagcagcagcgagtccaactcgggggaatcctcagagtcggactcggac
tga
DBGET
integrated database retrieval system
