Cyprinodon variegatus (sheepshead minnow): 107083154
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Entry
107083154 CDS
T06110
Symbol
abca3
Name
(RefSeq) ATP-binding cassette sub-family A member 3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107083154 (abca3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvg02000
]
107083154 (abca3)
Transporters [BR:
cvg02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
107083154 (abca3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_22
AAA_15
RsgA_GTPase
AAA_29
AAA_27
Motif
Other DBs
NCBI-GeneID:
107083154
NCBI-ProteinID:
XP_015227641
Ensembl:
ENSCVAG00000010772
UniProt:
A0A3Q2E0G7
LinkDB
All DBs
Position
Unknown
AA seq
1708 aa
AA seq
DB search
MAILRQFRLLVWKNYLQQKRQILVTLVEILLPLLFSGILIVLRQKVPFQDYPNATIYESF
AVDSLPKRFLRDLQLGYVPGNSSVVRQVAEDVRASLSLASVRGFETEEQFEKHVKTDPLS
HKLLAAVVFEHPFSRDDEPLPLQVSYHLRFTFTPRNAPPREKSELSPNSDLDWHTISLFP
LFQLPGPREQHDKEGGTPGYFREGFLAIQHAVDRAIMRSHNRTGADHLLGQTRVVLSRFP
YPNFIYDVFILAIQNQLPLLLVLSFTYTSLNIVRAVVQEKERKLKEYMRMMGLSNWLHWS
AWFLMFFLFLSISVFFVTLLLCIQVSPNGAVLNYSDPTLVFVFLLVFTVATINYSFMISA
FFSRANVAAAAGGFIYFLSYLPYLFLWPRYDLLSHAQKVSACLISNVAMAMGAQLIGMFE
GKGTGIQWSNLCDSVTVDDDFSMAQVLSLLLFDAVLYGLVAWYMEAVFPGEYGVPLPSYF
FLLPSYWCSSPRVALVNEKEEEEDAEKAMKGEFMEEEPAGVVSGIKIKHLTKDFKVGSKT
RQAVRDLTLNMFEGQITVVLGHNGAGKTTTLSMLTGLFPPTSGRAYINGYDICQDMALIR
RSLGLCPQHDVLFDNLTVREHLLFYAQLKGFHKEQISDEVDRIISILNLEDKRHSRSKTL
SGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPSARRATWDLLQGEKRGRTILLTTHFMDE
ADLLGDRIAIMAGGELQCCGSPLFLKNKYGAGYHMVIVKDALCNVSEITRLVHMYVPNAT
LESSAGAELSYILPKESTSKFELLFAELEMNKEELGIASYGASVTTMEEVFLRVGKLVDT
SLDIQAIQLPALQYQHERRSHDWTTDDASSISGLTDVTDFTDSGTLVSEDGSNIKLNTGV
RLHLQQFYAMFLKRALYSWRNWKVMVAQFLVPLIFTVVALVVARTLPNHQNAPQLRLDLS
RYGPTRVPVALQPGAGPLASSLANMYASQLLAQLGELENITDFTDYVLTQAKAEGGSFNE
RCVVGAAFLGRSSRYSEATAYFNNQGYHTPATALMMVDNALFRLLAGPNASILTGNYPMP
RNLSEAARSQLTEGKTGFAIAINLMYGMASLSSTFALLLVTESSIKSKHVQQVSGVYLSN
FWFSALLWDLINFLLPCLLMLVVFQAFGVEAFVADHHLVDVLLILVLYGWAIVPLMYLLS
FLFSTAATAYTRLTIFNMISGTATFLAVTIMAIPELNLVHLSHLLDKVFLIFPNYCLGMS
FSQFYQNYEFIKFCTSSPMSETICKYLNITYQTNFFSMSEPGVGRFLVSLSVQGVVFNAL
LFVIELQCVRTVCRLFTSLGRRRKQMPLLDDAAFLPEDRDVAEERKRVLECQPVVESMVG
SPLILHELSKVYSSGENLLAVDRLSLAVGKGECFGLLGFNGAGKTTTFKMLTGDESVTSG
DAYIDGYSILRDIKKVQQRIGYCPQFDAVLDHMTGRETLSMYARLRGIPEKYVPGCVENV
LRSLLLEPHADKLTRSYSGGNKRKLSAGMALIGGPPVIFLDEPSTGMDPVARRLLWDAVT
RTRESGKAIIITSHSMEECEALCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTLLAKVHRE
DDLEDSDLLLFKDFIESTFPGSQIKDEHQGMVHYHLTDKTLTWAQVFGTLEAAKEKYRIE
DYCVSQISLEQVFLSFAQFQHCTQTDRK
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggctatcttgagacaatttagactgctggtgtggaagaactatcttcagcagaaacgt
cagatccttgtaactctggtggagatcctcctgccactgcttttctccggcatcctcatc
gttctgcgtcagaaggtgccctttcaggactacccgaatgccaccatctatgaaagcttc
gctgtcgacagcttacctaaacgttttctgcgagacctgcagctgggctatgtgcccggt
aactccagcgtggttcgtcaggtggcagaagacgtgcgagctagcctgtctttggcctca
gtgcgtgggtttgagacagaggagcagtttgagaagcatgtcaaaaccgaccctctgtcg
cacaagctattggctgctgtggtctttgaacaccccttcagtcgtgacgatgaaccccta
cccctgcaggtgagctaccaccttcgcttcaccttcactccacgaaatgcgcctcctaga
gagaagtctgaactaagcccaaacagcgacctggactggcacaccatcagcctctttccc
cttttccagctgccagggcccagagagcagcatgacaaggaaggtggaacaccaggttat
ttccgtgagggctttctggccatccagcatgcagtagacagagccataatgcgatcccac
aacagaacgggagcagaccatctgctgggacagaccagggtagttctgtcccgctttcca
tacccgaactttatctatgatgtcttcatcttggccattcagaaccagctgccacttctc
ttggtgctcagcttcacttatacgtccctcaacatagtgcgagccgtggtgcaggagaag
gaacggaaactcaaggagtacatgaggatgatgggcctcagcaactggctgcattggagc
gcatggttcctgatgttcttcctctttctttccatttcagtattttttgttaccctgctc
ctctgtatccaggtgagtccaaacggtgctgtgctgaactacagtgaccccacgctggtc
ttcgtcttcctgctcgtcttcactgtggccaccatcaactacagcttcatgatcagtgcc
ttcttctcacgagccaatgtggcagcagcagcaggaggcttcatctacttcctcagctac
ctgccttatttattcctgtggcctcgctatgacttactgagccatgctcaaaaggtgtcg
gcctgccttatctccaacgtggccatggccatgggagcacagcttataggaatgtttgaa
ggcaaaggtacgggaatccaatggtcgaacttgtgtgactctgtgaccgtggacgatgac
ttctccatggcccaggttctttccttgctgctgtttgacgcggtgctttacggcctggtg
gcctggtacatggaggctgtgtttcccggggaatacggagtgcctcttccatcctacttc
tttttactgccttcatactggtgcagcagccctcgtgtggctttggtgaatgagaaggaa
gaagaagaagatgcagagaaagctatgaagggagagtttatggaggaggagccagctgga
gttgtgtctggaataaagattaaacacctcactaaggacttcaaagtaggaagcaagaca
cgacaggctgtgcgagatctgacattgaacatgtttgaggggcagatcacagtggtgctg
ggacacaacggtgccgggaagaccaccacgctctctatgcttacaggtctgtttccaccc
accagtggcagggcgtacataaacggctacgacatctgtcaggacatggctctgatccga
cgcagtctgggtctctgtccccagcacgacgttttatttgataacctcacagtgagagag
catctgctcttctacgcgcagctaaaaggctttcataaggagcagatttcagatgaggtg
gatcggatcatctccatcctgaatcttgaggacaagcgtcattctcgctccaagaccctc
tctggtggcatgaagaggaagctctctatcggcatcgccctcattggagactccaaggtt
gtcatgctagacgagcccacgtcgggtatggatccatcagcacggagagccacctgggac
cttctgcagggagagaaacgaggtcgcaccatcctcctcaccactcacttcatggatgag
gccgatctgctcggcgaccggatcgccatcatggcggggggtgagctgcagtgctgcgga
tcaccactcttccttaagaacaaatatggtgctggctaccacatggtgatcgtcaaggat
gcactttgtaatgtgtctgagatcactcgccttgttcacatgtatgttcccaatgctaca
ctggagagcagcgctggagcagagctgtcctacatcctgcctaaagaaagcaccagcaag
tttgagctgctgtttgctgagctggagatgaataaggaggaacttggtattgcaagctat
ggagcctcagtcaccaccatggaagaagtttttttgagagtgggaaagcttgttgatact
agtttggacattcaagcaatccagctgccggctcttcagtaccaacacgagagacgctcc
catgattggaccacagatgatgccagcagcatcagcggcctgacagatgtcacagatttc
acagacagcggcacactcgtgtctgaggatgggtcaaatattaaactaaacacaggggta
agactccacctgcagcagttttatgccatgtttctgaagagggcactgtacagctggagg
aactggaaggtgatggtggctcagtttttggtccctttgatcttcactgttgtggcctta
gtagtggcgcgcacccttcccaaccaccagaatgctccacagctgagactggacctcagc
cgctacggtcccaccagggtccccgtggccctgcagcctggggcgggtccccttgcatct
tctcttgccaatatgtatgcctcccagctcctggcacagctgggcgagctcgaaaatatc
acagacttcactgattatgtcctgacgcaagcaaaagcagaaggtggaagcttcaatgag
cgttgcgtggtgggtgctgccttcctaggtaggagcagccgctactcggaagctacagcc
tatttcaacaaccagggctaccacacgcctgccacagccctcatgatggtggataatgct
ctgttcagactcttagccgggcccaacgcatctatcctgacaggcaattaccccatgcct
agaaacctttctgaagctgcgaggagccagctcacagagggtaagactgggtttgccatt
gccatcaatctgatgtatggcatggcctcactgtccagcacgtttgcgctgctgcttgta
actgagtcctccatcaagtcaaagcacgtgcagcaggtcagcggcgtctacctctccaac
ttctggttctctgcgctgctgtgggacctgatcaacttcctgcttccgtgcctcctcatg
ctggttgtatttcaggcgttcggagttgaggcttttgttgcggatcaccacctggtcgac
gttctcctgatacttgtcctgtacggctgggccatcgtgcctctgatgtatctgctcagc
ttcctgttttccactgctgccactgcctacacacgcctcactatcttcaatatgatctcc
ggcactgccacgttcctggcagtcactatcatggccatcccagaattgaaccttgtgcac
ctgtcacatttgttggataaggtcttcctgatcttccctaactactgcctgggcatgtca
ttcagccagttctaccagaactatgaatttataaagttctgcacctcaagtcccatgagc
gaaacaatctgcaaatacctaaacataacataccaaacaaacttcttttcgatgtcagag
cctggtgtgggtcgttttctggtctccctctctgtgcagggcgttgtcttcaatgcgctg
ctgtttgtcatcgagctgcagtgtgtccgcaccgtctgcagactctttacctctctgggc
agaagacgcaaacagatgcctctcttagatgatgcagcgttcctccctgaggaccgggat
gtggctgaggagaggaagcgggtcctggagtgccagccggtggtggagtccatggtgggc
agccccctcatactgcatgagctcagcaaggtttacagcagtggggagaatctcctggct
gtagacagactgtcgctggctgtagggaagggggagtgttttggcctcctgggcttcaac
ggggcagggaagaccacaacgtttaagatgctgacgggtgatgagagcgttacttcagga
gatgcatacatagacggctacagcatcctgagggacattaaaaaggtacagcagcgcata
ggttactgtcctcagtttgatgcggtactggaccacatgacaggaagagagacgctgagc
atgtacgccaggctgagaggaatcccagagaagtatgtaccgggctgtgtggagaacgtc
ctgaggtcattgctgctggagcctcatgctgataaactgacccgcagctacagcggtggt
aacaagaggaagctgagtgcaggaatggctctgattggtggacctccagtcatcttcctg
gatgagccttccacagggatggaccctgtggcccggaggctgctgtgggacgccgtcaca
cgcacccgggaatctgggaaagccataataatcacttctcacagcatggaggagtgcgag
gcgctttgcaccaggctggcagtgatggttaacggtcagttcaagtgcctcgggagtccc
cagcatctgaagagcaagtttggcagcggctacaccctcttggctaaagtacacagggag
gatgatttggaggacagcgacctgctgctttttaaagacttcattgaaagtacctttcca
ggaagccaaatcaaagatgagcaccaaggaatggttcactaccacctcactgataaaaca
ctaacctgggcgcaggtgtttggcactttggaggcagccaaagagaagtaccgcattgaa
gactattgtgtgagtcagatatccttggagcaagtcttcctgagctttgctcagttccag
cactgcacacagactgacaggaagtag
DBGET
integrated database retrieval system
