Cyprinodon variegatus (sheepshead minnow): 107083158
Help
Entry
107083158 CDS
T06110
Name
(RefSeq) transmembrane channel-like protein 6
KO
K21988
transmembrane channel-like protein
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvg02000
]
107083158
03037 Cilium and associated proteins [BR:
cvg03037
]
107083158
Transporters [BR:
cvg02000
]
Other transporters
Pores ion channels [TC:
1
]
107083158
Cilium and associated proteins [BR:
cvg03037
]
Other cilia and associated proteins
Stereociliary proteins
107083158
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
107083158
NCBI-ProteinID:
XP_015227644
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MAYGGNLNDNICEKDCDYENIEEGEPRQDSFQLIKEPAFSVLGYPEAIQMGMITEYSDTS
DNTSTSSSEGSKQSLRRKPTRSLERKNWSAETRRVLSSMPSRKSGMHSSAGLALQGRQTH
AIQQHQTSSCDSILTARLTHDCIIQPELEEISTGERAENVAGSSLCGVGDHMEQLLSHLR
GLTVSEGMRKLRTTPLSLADKREIRKHYFSHLAEKSLIRKKLPCYNLQCVYISRMWHHCT
FNGLPFLSYLKLWNSSMKKLSGRYGTGVLSYFLFLRTLLSINLLLFIITCLFLVIPQAIH
SPPNDSLQHSFAALNLLTGTGYLSESLMFYGYYSNITIETNHPAGNAVTQLVPYSIPTAY
FFTITVSFFIICILLVYSMSKSFGRSFRVFKPHGNLSEKVFCFWDFKVSKKSSIRLQSEK
ISTQLKEQLSELTSGEDERSPMQRFCNLIVHFIAWLICLASIFLSACGVYFLSKNTISSE
YVTLKLLLTSAVVSGINLLLPGIFNLCCWFEKHNSPITRVYVSIFRNLLLKISIIGVLCY
QWFGKIAVKQDHQALECWENFVGQELYRLLLMDFLFTVLYTFLGEFLWRLYSKKMLKKNR
KPVFDIARNVLELIYGQTLTWLGVLFAPLLPAVQIAKLFLLFYMKKSSLMHNCQASKKPW
RATQMTTLFITLLCFPSFVGAAVSVGYTIWMIKPSPGCGPFRNLTSMFESGRLWAKKMKD
SHQILAWLIRAYNTFLDNPIFLFLPTGIFLLVIYFHAQVVDGQRKIIRRLEKQIENEGKD
KKFLISQLQYLREKNNQDSCQT
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacggtggaaacttgaatgacaacatttgtgaaaaggattgtgactatgaaaac
attgaagaaggtgagcctaggcaggattcttttcagctcatcaaagaaccagcattcagt
gtcctggggtatcctgaagccatacagatgggaatgattacagaatactcagacacctct
gacaatacatcaacaagcagcagtgaaggaagcaaacaatcgcttcgcagaaaaccgacg
aggtctttggaaagaaaaaactggtcagccgaaacgaggagggtgctatcctctatgccc
agccgtaaatctgggatgcacagttctgcaggtttagccttacaaggcagacaaacacat
gcaatacagcaacaccagacctcatcctgtgactccattcttactgcgagactgacccat
gattgtatcattcaacccgagttggaggaaatcagtactggagagagagcagaaaatgta
gctggttcaagcttgtgcggcgttggagaccatatggagcagttgctgtcacatctcagg
ggcctcactgtgagtgaaggtatgcgaaagctgcggaccacaccactcagcctggcggac
aagagggaaatcaggaaacattatttcagccatttagctgagaaatcactcatcagaaag
aagctcccctgctacaatctccagtgtgtatacatctcgaggatgtggcaccattgcaca
ttcaacggacttcctttcctcagctacctgaagctgtggaactcttccatgaaaaagctg
agtggacgttatggaaccggagttctctcctatttcctttttctgcgaaccctcctgtcc
atcaatctgctcctgttcattatcacctgtttgtttctggtcattcctcaagccatccac
tctcctcctaatgattctcttcaacactctttcgcagcccttaatcttctcacaggcacg
ggttacctttctgagagtttaatgttttacggttactactcaaacatcacaattgaaact
aaccatccagctggcaatgcagttacacagctggtgccttacagtatacccacagcctat
ttctttaccatcacggtttctttctttattatctgcatccttctggtttacagtatgtca
aagtcctttgggagaagttttcgggtgttcaaaccccacggaaatctgtctgaaaaggtt
ttttgcttttgggactttaaagtcagcaagaagtcatctatcagacttcagtctgagaaa
atcagcactcagctcaaagagcaactatctgagctgaccagtggagaagatgaaaggagc
cccatgcagcggttctgcaaccttatagtccatttcatagcatggctcatttgtctggcc
agcatcttcctcagcgcctgtggtgtctacttcttatccaagaacaccatcagttcagag
tatgtgactcttaaactattgttgacgtctgcagtggtgtctggcatcaacctgttgctg
cctggcatctttaatttatgctgttggttcgagaagcacaactctcccatcacacgtgtg
tatgtctccatcttcaggaacctgcttctgaagatcagcattattggagtgctgtgttac
caatggtttggtaaaattgctgtgaaacaagaccatcaagctctggagtgttgggagaat
tttgtggggcaggaactttaccgtctgctgttgatggacttcctcttcacagtgctttat
acttttctaggggagtttctatggaggctttactccaagaaaatgttaaagaagaacaga
aagccagtgtttgacattgcgcgtaatgtgttggaactcatatacggacaaactcttact
tggctcggagtgctgtttgctcctcttcttcctgcggtccaaatcgcaaagctgttttta
ctgttttatatgaaaaagagcagtctaatgcataattgtcaggcatccaaaaagccttgg
agagccactcagatgacaacactgtttattacgctgctctgcttcccttcatttgttggt
gctgcagtttctgtcggttacacaatctggatgatcaaaccttcaccaggatgtggccct
ttcagaaacctaaccagcatgtttgagtccgggaggctgtgggccaagaagatgaaggac
tctcaccagattctagcatggctgattagagcatacaacacttttttagataacccaatc
ttcttgtttctgccaactggtatctttctattggtgatatatttccatgcgcaggtagtg
gatggccaaaggaaaatcattagaaggcttgaaaagcagattgaaaatgaaggtaaagac
aaaaagttcctcatcagccaactacaatatttgcgtgaaaaaaataatcaggattcctgt
cagacatga
DBGET
integrated database retrieval system
