Cyprinodon variegatus (sheepshead minnow): 107083270
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Entry
107083270 CDS
T06110
Symbol
matn1
Name
(RefSeq) cartilage matrix protein
KO
K19467
matrilin
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
107083270 (matn1)
Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
107083270 (matn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
FXa_inhibition
cEGF
EGF_CA
TssR_VWA
Plasmod_Pvs28
EGF_3
Motif
Other DBs
NCBI-GeneID:
107083270
NCBI-ProteinID:
XP_015227837
Ensembl:
ENSCVAG00000006992
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MTPTAPLFLLLLLGLIGAQATFDQYMAAAMAKGQCKTRPMDLVFIIDSSRSVRPSEFEQV
KVFLTKVIDGLDVSPSATRVGVVNYASRVKNEVSLKTHQSKTALVKAVSKIDPLSTGTMT
GLAIQYALNVAFSEKEGARVKSSDVSKVAIIVTDGRPQDNVKEVAQRARDAGIEIFAIGV
GRVDKPTLRQMASEPLDDHVDYVESYSVIEKLTTKFQEAFCEEPQDLCATGDHDCQQVCI
STKASYKCGCKDGFTLMDDGRSCSACSNSAIDLVFVIDGSKSVRPENFELVKKWINQIID
KLDVSEKNTHVGLVQYSSTVKSEFPLGRYNNKKDLKDAVKRMEYMERGTMTGLAIYHIVN
HDFTVLQGARPGVQKIAIVFTDGRSQDYIGDAAKKAKQFGLKMYAVGVGNALESELKQIA
SEPVEEHYFYTADFKAMSQIAKKLNINVCDDPCECDSLVKFQKKVDDALQALNKKLEGMA
KRIALLENKIV
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgacacccactgcgccgcttttcctgctgctgctcctcggccttatcggagctcaggcc
acctttgatcaatacatggccgcagctatggcaaaaggtcagtgcaaaacccgtcccatg
gacctagtgttcatcatagacagcagtcgtagcgttcgcccctcagagtttgagcaggtg
aaggtgtttctgacaaaagtcattgacgggctggacgtatcaccctccgccacccgggtt
ggagtcgtcaactacgccagcagggtcaagaatgaggtctctttgaaaactcatcagtcc
aaaactgctctggtcaaggctgtgagcaaaattgaccctctttccactggaacgatgacc
gggttggcaatccagtatgccctaaacgtggccttcagtgagaaggagggagctcgggtt
aaatcctctgatgtcagcaaggttgccattatcgtgacagatgggcgtccgcaggacaac
gtgaaagaagtcgctcagcgtgctcgggatgcaggcattgagatcttcgccatcggtgtg
ggacgtgtggacaagcccaccctgaggcagatggccagtgaacctctggatgaccatgtg
gattatgtagagagctacagcgtcattgagaagctcaccacgaagtttcaggaggccttc
tgtgaagaaccacaagacctgtgtgccactggggatcatgactgtcagcaggtatgcata
agcaccaaagcatcatacaagtgtggttgcaaagatggctttaccctaatggatgacggt
cgcagttgcagtgcttgcagcaattctgcaatagaccttgtatttgtaatcgatggctca
aaaagcgtgcgtcctgagaactttgaactggtcaagaaatggatcaaccagatcattgac
aaactggatgtctctgaaaaaaatactcatgttggtcttgtgcagtactctagtactgtc
aaaagtgagtttcccctcggccgatacaacaacaagaaagacctcaaagatgccgtgaag
agaatggaatacatggagagggggaccatgacaggtttggctatttatcacattgtaaat
cacgacttcaccgtacttcagggtgcccggcctggtgtgcaaaagattgccatcgtcttc
actgacggacggagccaggactatattggagatgcagctaaaaaggcaaagcagtttggt
ttgaagatgtatgctgttggagtgggcaatgccttggagagtgagctgaaacagattgcc
tctgagcctgttgaagagcactatttctacacagctgactttaaggctatgagccaaatt
gccaagaagctaaatataaacgtctgtgatgacccttgtgagtgtgacagtcttgttaag
ttccagaagaaagtagacgatgccctacaagcactaaacaaaaaattagagggtatggcg
aagaggattgccctgctggagaacaaaattgtttga
DBGET
integrated database retrieval system
