Cyprinodon variegatus (sheepshead minnow): 107083486
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Entry
107083486 CDS
T06110
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
107083486
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvg02000
]
107083486
Transporters [BR:
cvg02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
107083486
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
107083486
NCBI-ProteinID:
XP_015228245
LinkDB
All DBs
Position
Unknown
AA seq
355 aa
AA seq
DB search
MLLILLIRGLCLPGALEGVLFYLLPDPTRLTDPQVWMEAGAQIFFSYSIGVGSLIVLGSY
NKQNNNCYRDCLWLCCLNSGTSVVAGFAVFSVLGFMAHKQGIPIAEVAESGPGLAFIAYP
QAVAMMPLPQLWSICFFVMLILLGLDTQFVAMEVVMTSIIDMFPRIMRQARRRESFLLLF
CLICFFSQLVMITEGGMFVFQLFDYYACNGACILFLCVFEALSMGWIFGADKLYGIIKDM
TGVDANPFFKICWLYLTPLVSLGSFICSLVEYQPLTFNRWYVYPSWAYVLGWVLALSSIL
LVPGWAFYKLATGKGTLRQRVCDLCRPALDDSPTQTTETELQNMGVDLLQPFMTN
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgatccttctaattcgaggactatgtcttcctggcgctcttgaaggagttctt
ttttatcttctgcctgatccaacacgattaactgaccctcaggtgtggatggaggccggg
gcacagatcttcttctcctacagtatcggtgtgggctctctaattgtgctaggcagctac
aataaacaaaataacaactgctacagggactgcctgtggctttgttgccttaacagtggt
acgagtgtcgtagctgggtttgcagtgttctctgtgctgggattcatggctcacaaacaa
ggcattcctatagctgaggtggcagagtcaggtccaggtttggcattcattgcatatcct
caggcagtggctatgatgcctcttccccagctctggtccatctgcttctttgtcatgctc
atcctcttgggtctggacacacaatttgttgcaatggaggtggtgatgacgtctatcata
gacatgtttcccagaattatgcgacaggcaagacgtcgagagagcttcctcctcctgttc
tgcctaatttgcttcttttctcagctagtcatgatcactgagggagggatgtttgtgttc
cagctgtttgactactatgcatgtaacggagcctgcatcctcttcctctgtgtgtttgaa
gccctttcaatgggatggatatttggagcggataaattgtatggcataataaaggatatg
acaggggtggacgccaacccattcttcaaaatctgctggctgtacctcacgccactggtc
tccctgggatctttcatatgttctttagtggagtaccagcctctgactttcaaccggtgg
tatgtttacccatcctgggcgtacgtattgggctgggtgctggctctctcctccatcctg
ctggtaccagggtgggcattttataagctggctacaggcaaaggcacactcaggcagcgc
gtctgcgatttatgccgacctgctctggacgactcaccaacccaaacgacagaaaccgag
ctgcaaaacatgggtgttgacctgctgcagccattcatgaccaactga
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