Cyprinodon variegatus (sheepshead minnow): 107083493
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Entry
107083493 CDS
T06110
Symbol
tsku
Name
(RefSeq) tsukushin
KO
K08130
tsukushi
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cvg00535
]
107083493 (tsku)
Proteoglycans [BR:
cvg00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
107083493 (tsku)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_14
LRR_6
LRR_LRWD1
LRR_EndoS
LRR_RPS2
LRR_MHP1-HER1-GIP3
LRRNT
LRR_9
LRR_NXF1-5
LRR_R13L1-DRL21
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
107083493
NCBI-ProteinID:
XP_015228272
Ensembl:
ENSCVAG00000019579
UniProt:
A0A3Q2DC46
LinkDB
All DBs
Position
Unknown
AA seq
348 aa
AA seq
DB search
MVLLLWLGLSLLLAEQSNAVRNCHPSCHCEVESFGLFDSFSLTRVDCRGMGPSFSMPITI
PLDTAHLDLSSNEMGPLSDAMLTGPGYTTLISLDLSSNKITKISPNALSKLRYLESLDLS
YNKLESLSPSCFSGLPLAEVDLSHNRFQEFDMAVFAAKVNGEPLNVDLSQNKLVSVSTTL
HGRVLNIQSVNLSSNQLVNVPSMAGLPLRYLNLDANPIKKIKKGAFAQLKELVYLSLSGL
SELHEIEPHTFSDLQNLQVLDLSNNSNLKSLQPAVFSGLESLQELNLSGSGVTSLPANML
SQLPSIKSITLGQSIHCWRTQKQGQFHRQIGQVQHNEELHCNVDGIVL
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggtacttctcttgtggctcggcctgtcgctgctgttggctgagcagtccaatgctgtc
aggaactgccaccccagctgtcactgtgaggtggaaagctttgggctgttcgacagcttc
agcctgaccagggtggactgcagaggcatgggtcccagcttctccatgcccattaccatt
cctttggataccgcccacctggacctgtcttccaatgaaatggggccgctcagcgatgca
atgttaaccggtccagggtatactaccttaattagtttggacctcagcagcaacaaaatt
acaaagattagccccaatgcattgtcaaagctgcgttacctggagagtctggatctgagc
tacaacaagctagagagcttgtctcctagctgtttttctgggctccctcttgctgaggtg
gacctcagtcacaaccgtttccaggagttcgacatggcagtgtttgctgctaaagtgaac
ggcgagccccttaatgtggatctgtctcaaaacaagctcgtgtcagtctccaccaccttg
catggaagagttttaaacatccagagtgtcaatttgtcctcaaaccagctggttaacgta
ccgagcatggcaggacttccgctcaggtacctaaatctggatgccaaccccatcaagaaa
atcaagaagggtgcctttgctcaactcaaagagcttgtttatctttctctcagtggtctc
agtgaactacatgaaattgagccacataccttcagtgatctccagaaccttcaagttttg
gacctctcaaataactcaaaccttaaaagtctgcaacctgcagtcttctctggactagag
tctctacaggagctcaacttgtctggctctggtgtgacttctttaccagctaacatgttg
agccagctccccagcatcaaaagtatcacccttggacaaagcatccactgctggaggaca
cagaaacagggacagttccatcgacagatagggcaggttcaacataacgaggagctgcac
tgtaacgtagacggcattgtgttgtga
DBGET
integrated database retrieval system
