Cyprinodon variegatus (sheepshead minnow): 107083515
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Entry
107083515 CDS
T06110
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvg03021
]
107083515
Transcription machinery [BR:
cvg03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
107083515
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
107083515
NCBI-ProteinID:
XP_015228311
Ensembl:
ENSCVAG00000007371
UniProt:
A0A3Q2FLM6
LinkDB
All DBs
Position
Unknown
AA seq
2097 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNIFCLADLTGIKWRRFVWQGPTSSPILFPVTEEDPILCSFSRC
LAADVLSVWRRHHTPGRRELWIFWWGDDPSFAELIHNELSSEEDGEWESGLSYECRTLLF
KAIHNLLERCLMNRGFVRIGKWFVKPYQKEERIINKSEHLSCAFTFFVHGDSNVCTSVEI
AQHQPLQRLSEEHLSLAQQSSSPLQVILSPYGLNGTLTSQAFKMSDHPTQKLIEEWRQFY
PICPNPKEVPEDKMEDADWEDDSLAAVEVLVAGVRMVYPSCLVLLPLSDLPSVVPQGSAN
NPGMQSGAHHGQAAHRDSAMSSVTLTPPTSPEEAHTDYQPAQRWLKLSSGSDCYSSNNTL
HGGKIPRRLSSQMVETVWQEYNINRAGIKRKFTTLTNGACEEESDRAGLWDFVEPTNRPA
CSCSRPKNQKQRSSSTSGHPPSSGQPTQPAAKHKLAEKLEKSDKQQRRPQTPFHHRNSVS
EEQSLEPQTPRLCARPQEEGSYPSLHHMDTVPPKAPTLHAHGPPSDLVGSPPPPPLSPHP
CDHGDLTPGGIKNASTPIHQPFYPPSVEPCLMPQKGLSEEPQPESTSFPSNYSETLEPTV
FVGSAVNPSEDSTHNPWKYFNLPRKKASNFLTPQLPVDKTGDDSGGGSETMISVTELMCS
SSQPLKVSQELIRTYTQRRNSHLGSTTEDGEHREESDPYAFIDGDDEFSILEKREKIGPE
KDNKKQKVDDGGTTTASDDGQGPSGSKPSASTSLIHEKDLVVSLSDLEKMFNSDEDEQEP
GSKRAGASTEDKTNPKDPKPERLDPLSSSDLSMMYPTPPSLDQNGYSPGNSGIKDGLETG
SGLILLDSSQLNNHFKIEVEEGFCSPKPSEIKDFSYVYKTETCQSMIGCSMYAPLKTLPS
QCLLPVKLPEDCVYTPSWTLGKMELMPPVSTVGLLPKDSNVPSVEPDYSQPFTPQTNTPF
LPGSAPPSNSGPGILPSPATPRFSVPTPRTPRTPRTPRGPSSVQGSLKYENSDLYSPAST
PSTCRPLSSVEPATVPSIPEAHSLYVTLILSESVMNLFKDCNFESCCVCVCNMNIRGADV
GVYLKDNGEDQYPCTCGFSAVTNRRFGQSAGLFLEDELDVVGRGSDAGRDTERRFDELRG
SLKEKPPDELILLLQDQCTNPLAPMAGMEWPKLSSAPSSFLRVEERDCYNDCYMALEHGR
QFMDNMSGGKVDETLVKSTSLHQWPKCKSADMSKLFSQDVLRVLLSLQPALQDTIQKKSV
RSWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLVGYEYDFMVLSPFGLPYWEKLL
LEPFGSQRDVAYVVICPENQSLLRGAKTFFKDLSVMYEACQLGQHKPICRSHPDGVLTVG
SPEGRSLTEQPISDWFLKMAARDGNNEAFNKLKLFAQVCRYELAPNLSELSLDSSLLSQR
HPTKPASQTPNSSSVSSGLQSTNTTSTSSTQPAQVNSTPPSSSSSGCQTNGNMASGKPSS
YLPFGAGSLQGSTTQNGPQSNSQSAGGLSENGSSQPQVSAETQESTMDRDKVGKPTDGES
HAVSYPPAIVVYIVDPFSYETADKEVHSSTYTLGLLRCYMEMLPFLPAHIRNAVSVQIVP
CQYLLQPVHSGDRHNYSQHLKSLAFSVYTQCRRPLPNSTNFKALTGFGPGLALDMALKNP
ERPECLRLYTPSFILAPVKDKQTELGETFGEASQKYNVLFVGYCLSHDQRWLLASCTDQH
GELLETCIISIDVPNRARRKKSSARRVGLQKLWEWCVGLVQVTSLPWRVVIGRLGRIGHG
ELRDWSILLSRTNLQSLSKRLKETCRMCGISAADTPSILSACLVAMEPQGSFVIMPDSVS
TGSVFGRSTTLNMQTSQLSTPQDTSCTHILVFPTSAMVQVNTNTSEPIDISFNPINPDGS
EGMGIFDLFVGDMDPELINILPNSPTTSPVHSPGHHYHHGGDVGKGQGADRMESHEEALS
ILQQPMALGYFISTAKAGPLPDWFWSACPEAQNQCPLFLKASLHLHVSSVQSDELLHSKH
SHPLDSNHTSDVLRFVLEQYNALSWLTCNPATQDRRSCLPVHFVVLTQIYNFIMNML
NT seq
6294 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgtgctttgtaccaaacggggccagtttggaggactgccactccaacatcttc
tgcctggctgacttgacaggaataaagtggcggcgttttgtgtggcaaggacccacttcg
tcgcccatccttttcccagtgaccgaggaggaccccatcctgtgcagtttcagccgatgc
ctggcagcagatgtgctgagtgtgtggagaaggcaccacaccccgggtcgcagggagctc
tggatcttctggtggggggatgaccccagtttcgcggagcttatccacaatgagctctca
agcgaggaggatggtgagtgggagagtggcctttcctacgagtgtcggaccctcctgttc
aaagccattcacaacctgctggagcgctgcctcatgaaccgcggcttcgttcgcatcggc
aagtggtttgttaagccataccaaaaggaggagaggatcatcaataaaagcgagcacctg
tcctgcgcctttaccttctttgttcatggcgacagcaatgtctgcaccagtgtggagatt
gctcaacaccagcctcttcagagactcagcgaggagcatctcagcctggcacagcaaagc
tccagccccttgcaagtcatcctcagcccctacggcctgaatgggacgctcaccagtcaa
gctttcaagatgtcagatcacccaacgcagaagctcatcgaggagtggaggcagttttat
cccatttgccctaatccgaaggaggtccctgaagacaagatggaggatgcagactgggag
gatgactccctggctgctgtggaggtccttgtcgctggagttaggatggtttacccctcc
tgcctggtgcttctccccctgtcggacctgccatccgtggttccacagggctcagccaac
aatccaggaatgcagagcggtgctcaccatggtcaggcagctcaccgggactccgccatg
tcctcagtcacactgactcctccaacttcgccagaagaggcccacactgactaccagcct
gcccaaagatggctgaagttgtcttcagggtctgattgctatagctctaacaacactctt
catggtgggaaaatcccccgcaggctctccagccagatggtggaaaccgtgtggcaggag
tataacataaaccgtgcagggatcaagaggaagtttacaaccttaacaaatggagcctgt
gaggaagagtcagacagagcgggactctgggattttgtggaacccactaacagaccagct
tgcagttgttcgaggcccaaaaatcaaaagcagcgatccagcagcacctcaggacacccg
ccatcatcgggccagcccacccagcccgcggcaaaacataaactggccgagaagctggag
aagagcgacaagcagcaaaggaggccgcagacgccctttcaccaccgcaactctgtgagc
gaggagcagtccctggagccacaaactccaagactttgcgcgcgcccgcaggaggaaggg
tcgtatcccagcctgcaccacatggacacggtgccccctaaagcccccaccctacacgcg
catggccctccatcggacctcgtcggctccccaccgccaccccctctcagcccgcatccc
tgtgatcacggcgacctgacgccaggcggcataaagaacgcctcgacgcccatccaccaa
ccgttctacccgccgtcagtggagccgtgcctgatgcctcaaaagggcttatcagaggag
ccgcagccggagagcacgtccttcccctcaaactacagcgaaaccttagagcccacggtg
tttgtaggttccgcggtaaaccccagtgaagattccactcacaacccctggaagtatttt
aacctccccaggaagaaagcctccaactttttgacgccccagttaccagttgataaaaca
ggagacgattctggaggaggctcagaaacaatgatctccgtgaccgagctgatgtgcagc
tcctcgcagcccctcaaagtgtcgcaagagctgatcaggacctacacccagcggaggaac
agccatctaggctccaccacagaagacggggaacatagagaggagtcggacccttacgcc
ttcatagacggagacgacgaattcagcattctggagaagagggaaaagattggaccagag
aaggacaacaagaagcagaaggtggacgatgggggaacgacaacagcttcagatgatggt
caaggtccatcaggcagtaaaccttcagcctcaacaagtctcatccatgaaaaagatttg
gttgtgtcgctcagtgacctagaaaaaatgtttaactctgacgaagatgagcaagagccg
ggctccaaaagagctggagcctctacagaggataagaccaaccctaaagaccccaaacct
gagcggttggatcccctatcatcatcagacctctcaatgatgtatcccaccccgccatcc
ctggatcaaaatggctactctcccgggaactctgggatcaaggacggcctggagacgggg
tcgggtctcatccttctcgacagcagccaactcaacaaccacttcaagatcgaggtggag
gaggggttctgcagcccaaagccatctgaaataaaggacttctcctacgtctacaagaca
gagacctgccagtctatgattggctgttcgatgtatgcccccctaaagactctacctagc
cagtgtctgttacctgtcaagctgcctgaggactgtgtttacacgccgagctggacactg
gggaagatggagctgatgccccccgtatcgaccgtcggtctgctccccaaagacagtaac
gtccctagtgtggagccagactacagccaacccttcacccctcagaccaacacgcctttc
ctgcctggcagcgctccacccagcaacagcggccccggcatccttccttccccagccacc
cctcgcttctctgtgcccactccccgcacaccacgcactccacgcacgccccgcggcccg
tccagcgtccagggctcacttaagtacgagaactcggatctttattccccagcctccacg
ccttccacctgtcgccccctcagctccgtggagccggccaccgtgccctccattcctgag
gctcacagtctgtacgtcaccctcatactctcggagtcggtcatgaacctgtttaaagac
tgcaactttgagagctgctgcgtgtgtgtctgcaatatgaacatccgcggagcagatgtg
ggcgtttacctcaaagacaacggggaggaccagtacccttgtacatgcggcttcagcgct
gtcaccaaccggcgattcggccaatcagccggactctttctggaggacgagctagatgtg
gtgggacggggctcggatgcaggccgagacactgagcgacgttttgatgagcttagaggc
agtctgaaggagaagcctccagatgagctgatcctgctgctgcaggatcagtgcaccaac
ccactggctccgatggcgggtatggagtggcccaagctgagctcagctcccagctccttc
cttagggttgaagaaagagactgctataatgactgctacatggcgctggagcatggcagg
cagttcatggacaatatgtcaggaggcaaagtggatgaaacactagtgaaaagcacgagc
cttcatcagtggccaaaatgcaaatctgcagacatgagtaagctattctctcaggatgtt
ctgcgggtgctgttgtcgctccaacctgcgcttcaggacaccattcagaagaagagtgtg
cgttcatggggcgttcagggaccactcacctggcagcagttccacaaaatggctgggaga
ggctcttacggtacagacgagtctccggagcctctgcccatcccaacctttctggttggt
tatgagtatgattttatggtgctgtctccttttggtttgccctattgggaaaagctgctc
ctggaacctttcggatcccagagggacgtggcctatgtcgtcatctgcccggaaaaccag
tcgctgctccgtggagccaaaaccttttttaaagatctaagtgttatgtatgaggcatgc
cagctggggcaacacaaacccatctgcaggagccacccagatggggtcctgacagtcggc
tccccggaaggcaggagcctaacggagcagcccatcagtgactggttcctcaagatggct
gccagggacggaaataatgaagcatttaataagctcaaactttttgctcaagtgtgtcgc
tatgaattagctccaaacctgtcggagctgtctttggatagctccctcttgtcacaacgc
catcccaccaagcctgcctcgcagactcccaactcttccagcgtctcctcaggacttcag
agcaccaacactaccagcaccagctccacccagccagcgcaggtcaacagtacccctccc
tcctcttcatcatcaggctgtcaaactaatggaaatatggcctcaggcaagccaagctcc
tacctgccatttggggcaggaagcttgcaaggcagcactactcagaacggacctcagtca
aactcgcaaagcgccggtggtctgagtgaaaacgggtccagccagcctcaggtctccgca
gagacacaggagagcacaatggatagagacaaagtgggcaagccgacagatggagagtcc
catgctgtttcttacccacctgccatagtggtctacatcgttgatcccttcagctatgaa
accgcagacaaagaggtccactccagcacttacacactgggcctgctgcgctgctacatg
gagatgctccctttcctacctgctcacatcagaaacgccgtctccgtacagattgttccc
tgccagtacctcctgcaaccagtgcacagtggtgatcgccacaactacagccagcacctg
aagtcgttggccttttccgtgtacacccagtgtcgtcggcctctgccaaattcaacaaac
ttcaaggccttgacgggctttgggcccgggctcgccctcgatatggccctgaagaacccg
gagcggccggagtgtctgcgattgtatacgccatctttcatcttggctccagtcaaagac
aagcagactgagctcggggagacgttcggcgaggcgtcgcagaagtacaatgtgcttttt
gtaggctactgcctgtctcatgaccagcgctggttgctggcgtcctgcaccgaccaacat
ggggaactgctggagacctgcatcatcagtattgatgtacccaacagggctcgcaggaaa
aagagttctgccagacgagtgggcttacagaagctgtgggagtggtgtgtcggcctggtt
caggtgacatcactgccgtggagagtggtgattgggcggcttggcaggataggtcacggc
gagctgagagactggagtatcttgctgagtcggacaaatttgcagtctctcagtaagcgc
ctgaaggagacatgtaggatgtgcggcatctctgctgccgacacacccagcatcctcagc
gcctgtctagttgccatggagccacaggggtcctttgtgatcatgccagattccgtctcg
acgggttcagtgttcggtcgcagcaccactctcaacatgcagacatcccagctgagcacg
ccgcaggacacgtcctgcacacacattctggtgttccccacgtcggccatggtgcaggtc
aacactaacacttccgagcctatcgacatcagcttcaaccccattaaccctgacggctct
gaagggatgggtatttttgacttgtttgttggcgacatggatccagaactcatcaacata
ctgcctaactctccaaccacctctcctgttcactctccgggtcaccactaccatcacgga
ggagacgtaggcaagggccagggtgcggatcggatggagtcccatgaggaggctctcagc
atcctgcagcagccgatggctctgggttacttcatttccacagcgaaggcggggccactc
cctgattggttctggtccgcctgtcctgaagctcagaaccagtgtccgctctttctgaag
gcgtctctacacttgcacgtgtcgtccgtccaatcagacgagcttctgcacagtaaacac
tcccaccccctggactctaaccacacctctgacgtgctcagatttgtcttagagcagtac
aacgccctctcctggctcacatgcaaccctgccacccaggaccggcgctcatgtctgcct
gttcacttcgtggtgctcacacagatctacaacttcattatgaacatgctctga
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integrated database retrieval system
