KEGG   Cyprinodon variegatus (sheepshead minnow): 107083576
Entry
107083576         CDS       T06110                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    107083576 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cvg03400]
    107083576 (xrcc1)
DNA repair and recombination proteins [BR:cvg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     107083576 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 107083576
NCBI-ProteinID: XP_015228403
Ensembl: ENSCVAG00000000899
UniProt: A0A3Q2E8D7
LinkDB
Position
Unknown
AA seq 623 aa
MPEIKVKHVVSCSTEDSTHKADNLLSSDTYRKWKAAKPGEKQTSVILQFEKEEQVHSIDI
GNEGSAFIEVLVGNSSAVKNQDYEVLLVTSSFMSPTESRNGTNMNRVRFFGPNQLQKSTA
QEKWDRVKIVCTQPYSKNIAYGLAFVKFHSPPDKTDPPTSSPKITKLGQFRVKDESPSSG
PSLQPGSLFFNRDNATKPSTSLKASPPSDKLSYAAAALQAGGSSQSSGQASTSVSASPQP
PAKRKFEFSKERQSAPGPPAKKMSPAASPETKVTTSKHKQSPVSTPSPGTAKASSAQKSA
EKKRESQAKAEPKPKPKTKTKTEQQVPFKQILEGVVFVLSGFQNPFRGELREKALEMGAK
YRPDWTPDSTHLICAFANTPKYSQVKSAGGIIVRKEWVMDCHKRKQKISYKRYLMDGAES
SSESEMEVDDQSEEEMETEIPQKQVRQVTPKKTPEKKDKDDEYGGSTDVDEPDEDEDESG
VDTEDELQRVESRQKKAAVKESSVKEEDPYGGSTDENTDAEAEEDYPIPELPDFLKGKHF
LLYGKFPNNERRLLLRYIVAFNGVIEDYMSEKVQFVVTSEGWHESFEDALMDNCNLNFVK
PAWIYAINERQKMLPYQPYTVVP
NT seq 1872 nt   +upstreamnt  +downstreamnt
atgccagaaatcaaagtaaaacacgtggtttcctgctccacggaggacagtactcataaa
gcagacaacctgctgagctcagacacctacagaaagtggaaagccgcaaaacccggagag
aagcagacatccgtcatcctacagtttgagaaggaggagcaggtccacagtattgacatc
ggaaatgaaggatcagctttcatcgaagtgttggtcggaaattcttcagccgtcaaaaac
caagactatgaggttcttcttgttacgtcttccttcatgtcccctactgagagccgaaat
ggcaccaacatgaaccgggttcgtttctttggacccaaccagttgcagaaaagcacggct
caggagaagtgggacagagtgaaaattgtgtgcacccagccatacagcaagaacattgca
tacgggctggcttttgtcaagttccactcgccacctgataaaaccgatcctccgacttca
tctcctaaaataacaaagcttggacagttcagggtgaaagatgagtctccttcatctggg
cccagccttcaacctggcagtctcttcttcaaccgagacaatgcaacaaagccaagcact
tcactcaaagcctctccaccaagtgacaagctgagctacgctgctgctgctctgcaagca
ggaggcagctctcaatcatcaggtcaagcttcaacctccgtctctgcctcaccacagccc
ccagcaaaaaggaagtttgagtttagcaaagagcggcagtcagctccaggacctccagca
aagaaaatgagcccggctgcctcgcctgagaccaaagttacaacctctaaacacaaacaa
agcccagtcagcacaccaagcccaggcactgccaaagcatcatcagcacagaaatctgct
gagaagaagagggagagccaggccaaagcagaacctaaacccaaacccaagacaaagact
aagactgagcagcaagttccatttaaacagatcctggagggggtggtgtttgtcctgagt
ggcttccagaaccccttcagaggggagctgagagaaaaggcacttgaaatgggagccaaa
tatcgaccagactggactcctgactccacacatcttatctgtgccttcgccaacaccccc
aagtacagccaggtgaaatcagcaggcggtatcatcgtgaggaaagaatgggtgatggac
tgccataagaggaaacagaaaatctcatataaacgctacttgatggatggagcggagtct
agctctgagagtgaaatggaggtcgacgaccagagtgaggaggaaatggaaacagagatt
ccacagaagcaggtgagacaagtcaccccgaaaaagacaccagagaaaaaggataaggat
gatgaatacgggggctcaactgatgttgatgaaccagatgaagatgaggatgaatctgga
gtggatacagaagacgagctccagagggtggaaagcaggcagaaaaaagccgccgtgaag
gaatcatcagtgaaagaggaggatccatatggggggtctacggatgaaaacacagatgct
gaagcagaagaggattatcccatccctgagctgccagacttcctcaaaggaaagcacttt
ttactgtatggaaaattcccaaacaacgagaggcgactacttctacgatacatcgttgcc
ttcaatggagtgattgaggactacatgtcagagaaagtgcagtttgttgtgaccagtgaa
ggatggcatgaatcctttgaagatgcgctgatggacaattgtaacctgaactttgtgaag
cctgcatggatttacgccatcaatgaacgtcagaaaatgctgccctatcagccttacact
gtcgtgccctga

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