Cyprinodon variegatus (sheepshead minnow): 107083680
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Entry
107083680 CDS
T06110
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04137
Mitophagy - animal
cvg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107083680 (vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
107083680 (vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107083680 (vcp)
03009 Ribosome biogenesis [BR:
cvg03009
]
107083680 (vcp)
04131 Membrane trafficking [BR:
cvg04131
]
107083680 (vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvg04147
]
107083680 (vcp)
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
107083680 (vcp)
Ribosome biogenesis [BR:
cvg03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
107083680 (vcp)
Membrane trafficking [BR:
cvg04131
]
SNARE
SNARE associated proteins
Others
107083680 (vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
107083680 (vcp)
Exosome [BR:
cvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107083680 (vcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
Sigma54_activat
NACHT
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
107083680
NCBI-ProteinID:
XP_015228567
Ensembl:
ENSCVAG00000011928
UniProt:
A0A3Q2CVW5
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MASGGESKPEDLTTAILKQKSRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIRREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLAEDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFKWALSQSNPSALRETVVEVPNITWDDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRISILKAN
LRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSTAGG
SGPSHGSGGTGSGPVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggaggggaatcaaaacctgaagatctaacaactgcaattcttaagcaaaag
agcagacccaacagactgattgtcgatgaatcgattaacgaagacaacagcgtcgtctct
ctttctcaggccaaaatggacgagctgcagctcttccgtggtgacacagttctgatgaag
gggaagaagagacgggagacggtttgtatcgtgctctcagatgacacctgctctgatgaa
aaagttcgtatgaacagggtggtccgcaacaatctgagggtccgtcttggtgacgtcatc
agcattcagccatgtcctgatgtaaagtatggaaagaggattcatgtcctccctatagac
gacacagtagagggaatcactggcaacctgtttgaagtctacttgaagccatactttctg
gaggcttacagaccaatccgtaaaggtgatatctttctggtcagaggaggcatgagagct
gtggagttcaaggtggtggagaccgatccttccccctactgcatagttgctcctgacaca
gtcatccactgtgagggtgagccaatcaggagagaggatgaggaggagtccctgaatgaa
gtgggatatgatgacattggaggagttaggaagcagctagctcagatcaaagagatggtg
gagctgcctctcagacatcctgcactgtttaaggccataggagtcaagcctccgcgtgga
attcttctatatggacctcctggaactggaaaaaccttgattgccagggctgtggcaaat
gaaactggagctttctttttcctaatcaatggtcctgagatcatgagtaagctggctgga
gagagtgagagtaacctgagaaaggcctttgaggaggcggagaagaacgctcctgcaatc
atctttattgatgaacttgatgctattgctccaaagagagagaagactcatggtgaggta
gagaggcgcattgtctcccagctgctgactctcatggacggcctgaaacagagagctcac
gtgattgtcatggctgccaccaacagacccaacagcattgatccagctctcaggagattt
ggacgttttgacagagaagtggacatcggcatccctgacgcaactggcaggttggagatt
ctacagattcacaccaaaaacatgaagctggctgaggacgttgatttggaacaggttgcc
aatgagacccatggccacgtcggtgctgatctggcagctctctgctccgaggctgctctg
caggccattaggaagaagatggacctgatcgacctggaagatgagacaattgatgctgaa
gtcatgaattctcttgccgttaccatggacgacttcaagtgggctctgagccagagcaac
ccatcagctctgagggagacggttgttgaagttcccaacatcacctgggatgacattgga
ggtctggaggatgttaagagggagctgcaggagctggtgcagtaccctgtggagcatcca
gacaagttcctgaagtttggcatgaccccatccaagggtgtgctcttctatggtccccct
gggtgtggtaagactctgctggccaaagccattgccaatgagtgccaggcaaatttcatc
tccatcaaaggacctgagctgctcaccatgtggtttggagagtctgaggctaatgtcaga
gagatctttgataaggctcgtcaagccgccccatgtgtgctcttctttgatgaattggac
tccatagccaaggctcgtggtggcaatgttggagatggtggcggagctgctgatcgtgtc
atcaaccagatcttgacagagatggacggaatgtccagcaagaagaacgtcttcatcatt
ggagccaccaacagaccagacatcatcgaccctgccatcttgagacctggccgcttggat
cagcttatctacatccccctgccggatgagaagagcaggatcagcattctcaaggccaac
ctgcgcaagagccctatcagcaaggatgtggacttggacttcttggccaagatgaccaat
ggattctctggtgctgatctcacagagatctgccagcgggcctgtaagctcgccatccgg
gagagcattgagaacgagatccgcagagagagggagaggcagacaaacccgtcagccatg
gaagtagaagaggatgaccctgtgccagagatcaggaaggaccactttgaggaagcaatg
cgattcgcccgtcgctctgtcagcgacaatgacatccgcaaatacgagatgtttgctcag
acactgcagcaaagccgaggcttcggcagcttcaggtttccctccagtactgcaggcggc
agcggtccaagtcacggctcaggtggaactggtagtggtccagtgttcaatgaagataat
gatgacgacctttacggataa
DBGET
integrated database retrieval system
