Cyprinodon variegatus (sheepshead minnow): 107083775
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Entry
107083775 CDS
T06110
Symbol
tnn
Name
(RefSeq) tenascin-N isoform X1
KO
K06252
tenascin
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04510
Focal adhesion
cvg04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107083775 (tnn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107083775 (tnn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cvg00536
]
107083775 (tnn)
Glycosaminoglycan binding proteins [BR:
cvg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107083775 (tnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
Ig_DSCAM-DSCAML_C
EGF_2
EGF_Tenascin
Pur_ac_phosph_N
Fn3_Dep-1_4th
Arylsulfotran_N
DUF4998
DUF4249
EGF
DUF460
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
107083775
NCBI-ProteinID:
XP_015228719
Ensembl:
ENSCVAG00000009462
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MSVGLIWRALCLLSILCTLSRNVHCTENQPDLSGTERGLTFSHVYKIDIPGSSSCTVERL
PVQETGLQQDTTSNGENDIIFKHNIRLQTSKCNCEESESFKELLYRVNGLEEEVNYLKTQ
CTQGCCGRGGAAGVDTSCSDHGTYQHDTCSCLCNPGWEGPDCSVSSCPDECSDNGRCVDG
RCVCYEGYTGEDCSQLTCPGDCNDKGQCVDGKCVCFPHFTGEDCSIPKCPNDCEGNGQCV
DGQCVCDDGFYGEDCSTVLAPKGLQLIQKTDVSLLVEWETVQGAEYYMLTYHPKFDEGAV
EEVQIPNSENSYLITDLTPGVTYIVKVYAVIKKIQSEADMIKATTDVSTIDDMRVTGQTE
VSIQVDWKNPQAEVDYFRLTHTDPSGQEEELNVQRSQEARTKHTIVGLYPGTEYQISVQS
IKGNAGGKASFTTGVTDIDAPSNLVTTEVTEDTATVSWDKVQAEIEGYMLSYTSAEGSSS
EIFVGRDSTSYRLVGLRPGVLHTVYIWAFRGDKVSEKSSTEAETELDAPTNLSVEDETDS
SFRVYWDPTQAQIDGYMLTYSSSDGSREETPVGSDSSYVLTGLRPGVVYTVYLWAVRGSK
ASRKISTEAETEMDAPANLIASDITESSFSLSWDPVQAEIDGYILTYTSPDGSSKEIPVG
PGSSTYMLTGLRPAVLYTVYIQAMKGDKTSKEISTQAETEIDSPKDLKATDVTIDSALLT
WAPPLADIEGYILTYREEEGNLQAIERRLDASETSFTASNLKMGKRYIVTIVAFRGSKRS
RMVETLFKTVAMLYPFPMDCVQIMRNGNNNNGIYTVYINNNQSKPIEVFCDMTTDGGGWL
VLQRRNTGKLDFMKRWRQYIAGFGNMTEEFWLGLDKIYALTNTPTQYELRFDLGLGSERA
YAVYDNFKIAPIRQKFKLTIGKYRGTAGDAMTYHQDRLWTTIDSDNDIALTNCARTHSGA
WWYANCHLANLNGKWGDNRHSLGVNWEPWKGHLTSLDFTEMKIRPVGALSSRKKRSLMVR
EKKSRVSNTHK
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttggactcatatggagggccctgtgcctgctgtccatactttgcactttgtca
cgcaatgtgcactgcacagagaaccagccagatctctcaggcacagaacggggactcacc
ttcagccacgtctacaagattgacatcccaggaagctccagttgcaccgtagagcgtctg
ccagtccaagagacaggtctgcaacaagataccacatccaatggagagaatgacataatc
ttcaaacacaatattaggctgcaaacatccaagtgtaactgtgaggagtcagaaagcttc
aaggagctgttgtacagagtcaatggactggaagaagaagttaactacctaaagacccag
tgcactcagggatgctgtggaagaggaggtgctgcaggtgtagacacaagctgcagtgat
catggtacctaccaacacgacacctgcagctgcctatgtaacccaggatgggaaggtcct
gattgctctgtgtcgtcctgccctgacgagtgcagcgacaacggccgatgtgtagatggg
agatgtgtgtgttatgaaggctacacaggagaagactgcagccagctgacgtgtccaggc
gactgtaatgataaggggcagtgtgtggatggaaaatgtgtctgtttccctcattttacg
ggtgaggactgcagcatcccaaagtgccctaatgactgtgagggcaatgggcagtgtgtg
gatggccagtgtgtctgtgacgatggcttctatggagaggactgttctacagtcttggca
cctaagggtctgcagttgatccagaagacagatgtctctcttctggtggaatgggagact
gtccaaggagctgagtattacatgttgacttatcatcccaaatttgatgagggtgcagtg
gaggaggttcagattcctaactctgaaaattcctaccttataacggatctcactccaggg
gttacctacattgtcaaagtctatgcagtcatcaaaaagatccagagtgaagcagatatg
attaaagccaccacagatgtctcaaccatagatgatatgcgagtcactggccagacagag
gtttcaatccaagtggactggaagaacccacaggcagaagtggattatttcagactgaca
cacaccgacccatcaggacaggaggaggagctgaatgttcagaggagtcaagaggcacgc
accaaacacactattgtaggtctatatccaggaacagagtaccaaatctctgtgcagtcc
atcaaaggaaacgccggagggaaggcctcttttactactggtgtcacagacattgatgca
ccatcaaaccttgtcactactgaagtaactgaagacactgcaacagtctcctgggataag
gtccaggcagaaatcgaaggctacatgttgagctacacatctgctgagggctccagctca
gagatctttgtaggccgtgacagcacctcatacaggctggttggtttgaggcctggagtc
ctgcacacagtctacatttgggccttcagaggagacaaagtcagtgaaaagagttcaaca
gaagctgaaacagagttggatgctcctactaacctctcagtcgaagatgagacagactcc
agcttcagagtttactgggatccgacccaagcacaaattgatggctacatgctcacctat
agctcctcagatgggtccagggaggaaaccccagttggatcggacagttcttatgtgctc
actggccttaggccaggggtcgtctacactgtctatctctgggctgtcaggggaagcaaa
gccagcaggaagatctcaacggaagcagagacagaaatggacgctccagctaacctcata
gccagtgacataacagagtccagcttcagcctctcttgggatccggtccaagcagaaata
gatggctatatcctgacctacacctcccctgatggatctagtaaagaaatccccgtagga
cctggtagctccacttatatgctgactggtttacggcctgcagtcctctacactgtctac
attcaagccatgaagggcgacaaaaccagcaaggaaatctcaacacaagcggaaacagag
attgactcccccaaggacctaaaggctacagatgtgacaatagactcagctcttttgacc
tgggctcctccactggcagacattgagggttacatcctcacatatagagaagaagaaggg
aatttgcaggctattgaaagaaggcttgacgccagcgagacaagcttcactgcatccaac
ctgaagatgggaaagaggtacattgtcaccattgttgcttttaggggcagcaagaggagt
aggatggtggaaaccctttttaaaacagttgctatgctgtaccccttccctatggactgt
gtacaaataatgaggaatggcaataacaacaatggcatctataccgtctacattaacaat
aaccaatccaagccaatagaggttttctgcgatatgactactgatggaggcggctggctg
gtattgcagcgccgaaacactggcaagctggacttcatgaaacgctggaggcagtacata
gcaggctttggcaacatgacagaggagttctggctgggtttggataagatatatgcgcta
accaacactcctacgcagtatgagctaaggttcgacctgggcctgggctcagagagagct
tacgctgtctatgacaactttaagattgctccgatcagacagaagttcaagctcacaatt
ggcaaatacagggggacagcaggtgatgctatgacctatcaccaagaccggctctggacc
accatagattcagataatgacattgccttgactaactgtgccagaacccacagcggagca
tggtggtacgctaactgtcatttggccaacctcaatggtaaatggggtgacaacagacac
agtctgggagtcaactgggagccatggaagggacacctaacttccctcgacttcaccgag
atgaagatccgacctgtgggagcactgtccagcagaaagaagagatcattgatggtcagg
gagaaaaaaagcagggtttcaaacacccacaagtag
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integrated database retrieval system
