Cyprinodon variegatus (sheepshead minnow): 107083875
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Entry
107083875 CDS
T06110
Symbol
samd4a
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107083875 (samd4a)
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
107083875 (samd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_3
PHAT
Motif
Other DBs
NCBI-GeneID:
107083875
NCBI-ProteinID:
XP_015228877
Ensembl:
ENSCVAG00000006183
UniProt:
A0A3Q2FJY8
LinkDB
All DBs
Position
Unknown
AA seq
721 aa
AA seq
DB search
MMFRDQVGVLASWFKGWNECEQTVALVSLLKRVSRTQARFLQVCLEHSLAECTELQVLEG
EANNPVLISQWQSEPKERIISLVLTHLPLLKPGNTEAKSEYMRLLPRILAHTIEHGHHLE
ESRQLLSYALIHPATSLDDRSALALWLNHLEERAAARGDSLERPPPASGPHHHHHQSTPS
STLSSSSLSSTNSSSSGNLYNLHHHQRYGSDDRLNGWQNSRDSGIGGGWHQQQSCENGHL
SLYPSSSVPATINTVGTSGGSNTILTSGGGSQQHSPLKRSVSLTPPISGPNNQPLGHVWL
SQEDLRTSRGPAPDHAPLSPQSSIASSGSGGSEHLEDAGLGGSSSLHRNSFHEDGSGMRD
VPAWLKSLRLHKYAALFSTLTYDEMMSLTEEQLEAQKVTKGARHKIVISIQKLKERQNLL
RSLEKDVLEGGNLRTPLQELHQMIITPIKAFSGGEESSLQRSVMNPETKRSSDSNLSGGG
GGEAESGASVIAEGDLPGQFTRVMGKVCTQLLVSRSDEDNFSSYLQLIDKCLIHESFTET
QKKRLLSWKQQVQRLFRSIPRKTLLDIAGYRPQRSRFGQSNSLPTASCVGGSVSARRSLH
QFHMPSRSLPGARLGLLGSGGLLGPTPRSSSSTPTGPKQGRHGPWFANPGGSNSMPSRSH
SSVQRTRSLPVHTTPPTMVTFQQADHQFPVTEPDINNRLESLCLSMTEHALGDGADRTST
I
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgggatcaggtgggcgtgctggccagctggtttaagggatggaacgagtgc
gagcagaccgtggctctggtgtccctgctgaagagagtgagccggacccaggcccgcttc
ctgcaggtctgcttggagcactccctggctgaatgcacggagctgcaggtcctggaggga
gaagcaaacaatccagttcttatcagtcagtggcaaagtgaaccaaaggagcgcatcatc
tcgctggtccttacccacctccctctgctgaaaccgggcaacacggaagctaagagcgag
tacatgcgtctgctgccccgcatcctggcccacaccatcgaacatggccaccacctggag
gagtcccgccagcttctgtcctatgctctaatccatcccgccacctccttggatgaccgt
tccgctctggcgctctggctgaaccacttggaggagagggctgctgcgaggggggattcc
ctagaaaggccccctcccgcctctggcccccaccatcaccatcatcagtccacaccctct
tccaccctctcctcatcatccttgtcttccacaaactcttcctcgtccgggaacctgtac
aacctgcaccaccaccagcgttatggctcagacgatcgtctcaacgggtggcagaactct
cgcgattcaggaatcggtggaggctggcaccagcagcagagctgtgagaacggacacctc
tctctttacccatcgtcctcagtgccagcaaccatcaacacagttggaaccagtggtgga
agcaacacgattcttacaagtggaggaggaagtcagcaacacagtcccctaaagcgctcc
gtgtcccttacgcctcctatcagtggccccaacaaccagcctctgggccacgtctggctg
tcccaagaggaccttcggactagcagaggccctgcccccgaccatgctcccctctcccct
cagagtagcattgcctcctcaggcagtgggggcagcgaacatctggaagatgctggttta
ggaggcagttcaagtcttcatcgcaattcgttccatgaggacggcagcgggatgagggat
gttcctgcttggctcaagagtcttcgtctccacaagtacgccgcgctcttctccacatta
acctatgacgagatgatgtcactaacggaggaacaactagaagcacagaaggtcaccaaa
ggagctcgacacaagattgtaatcagcattcagaaactcaaagagaggcagaacctcctt
cgcagcctggaaaaggacgtcttagagggtggaaatctacgcacccctcttcaggaactc
caccagatgatcataacccctattaaggccttcagtggaggggaagagtcatctttgcag
cgtagcgttatgaatcctgagacgaagcgttcatccgactccaatctctctggagggggt
ggaggtgaagccgagtctggtgctagtgtcatcgctgagggggatctacctggtcagttc
actcgtgtcatgggcaaagtttgtacacagctccttgtatcacggtcagatgaagataac
ttcagctcctacctgcagctgattgataaatgtctcatccatgagtccttcacagagaca
cagaagaagaggctgttgtcttggaaacaacaggtccagaggcttttccggtccattcca
cggaaaacactccttgacattgcagggtaccgacctcagaggagtcgttttggtcagtca
aactctctccctactgcaagctgtgttggaggcagcgtgtcagccaggaggagtctccac
cagttccacatgccttccaggagtttgcctggggccaggcttggtctactgggcagtgga
ggcttgctgggacccacgcctcgcagctccagcagcaccccaactggtcccaagcagggg
agacatggtccatggttcgccaaccctggaggaagtaacagcatgcccagtaggagccac
agctctgtacagaggacgcgttccctgccggtccacaccacgccaccaaccatggttacg
ttccaacaagccgatcatcagtttccagtgacggagccggacataaacaatcgtctggag
tccttgtgtttgagtatgacggagcacgctttaggagatggcgctgatcgcacatcaaca
atatga
DBGET
integrated database retrieval system
