Cyprinodon variegatus (sheepshead minnow): 107083878
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Entry
107083878 CDS
T06110
Name
(RefSeq) lymphocyte-specific protein 1-like isoform X1
KO
K12327
caldesmon
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
107083878
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvg04812
]
107083878
Cytoskeleton proteins [BR:
cvg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
107083878
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
107083878
NCBI-ProteinID:
XP_015228883
Ensembl:
ENSCVAG00000006553
LinkDB
All DBs
Position
Unknown
AA seq
527 aa
AA seq
DB search
MSESIKRRNSSKQLLQNLIRVTAQRSQEDAEEIERERRRKAREKQREEGILCFPEPQQHE
NITHNTESDEELKPSYFVLEEDEGFSDWSQRLENRNEQDALDNFRTKEVKPTAASVPGDY
KHEHDEEEGKGEHGGRETEEASTQRSETIFSSKTPARTSYSSSVFLSQDTRQHLAAGHSA
DRTSYLAAGTMKTRNLDQCGGPSRLEEEQMRKDEDNEENVKLTLQMERQSSNEKVQEQKE
LICTVEEKEEIRKEQAHWAAEKEQEEYYALKNKRCEESQRRWSEEMSSGLAGFSDGEEPL
NCYGPMSPTFKKLLVQFYPDEVNSRVSPDGKCKITERTESLRRSTSTIKKTLPPISVSKI
DKRLEEYTHALEVASKEGRSSCQVLADLTSPSEPVASKKNLFEAGEAWNQNVISVTPCKD
ADGLKVGVADLINQWVKGGEDGSRSSSPSKPAEIRPGGVLNKKNLWEGLSDALTSTKDGK
ENSTKRYKYVVTGHGKYAKVPGHGCNEDLNCQLDSSMKSCEAGVVEN
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtcaatcaagaggagaaactcgagtaagcagctactgcaaaacctcatcagg
gtgacagcgcagcgaagccaggaggatgcagaggagattgaacgagagcgaagaaggaaa
gccagggagaagcagagagaagaagggatcctctgtttcccagagccccagcaacatgaa
aatattactcacaacacagagtctgatgaggagctgaaaccctcctatttcgtcctggag
gaggacgaaggtttcagcgactggagccagaggttggaaaaccgtaatgagcaggatgcg
ctagataacttcaggacgaaggaagtgaaacccactgcagcatcagttcctggggactat
aagcatgaacatgatgaagaggagggcaaaggggagcatggaggaagggaaactgaggaa
gcttcaacacaacgttcagaaacgatattcagctctaaaactccagccaggacatcatac
agctcctctgtcttcctgtcacaggatacaaggcaacaccttgctgcaggacactctgca
gacaggacgtcatacctggcagcagggacgatgaagacacggaacttggaccaatgtggt
ggacccagcaggctggaagaggagcagatgaggaaggatgaggataatgaagagaatgta
aagctgacactgcagatggagcgacagagctcaaacgaaaaagtgcaggagcaaaaagag
ctgatctgcacagttgaagaaaaggaagaaatcagaaaagaacaggcacactgggcagca
gagaaggagcaggaggagtattatgcactgaaaaacaagagatgtgaggagagccaaaga
agatggagtgaggagatgagcagtgggctggcagggttcagtgatggcgaggagccatta
aactgctatggccccatgagtcccacgttcaagaaactcctcgtacagttctacccagac
gaggtgaacagccgagtttcaccagatggaaaatgtaagataacagagaggacagagtct
ctcaggagaagcaccagcaccataaagaagacattgccacctatatctgtttctaaaatc
gataaaagactggaagaatacacacatgctctcgaggtcgcttcaaaggaaggaagatca
agttgccaggttctagcagaccttacaagcccctctgaaccagtagcatcaaagaagaac
ctgtttgaagctggggaagcctggaaccaaaacgtcatctcagtcacaccgtgcaaggat
gcagatggtttaaaggttggtgtggccgatcttatcaaccagtgggtaaaaggaggcgaa
gatggtagcaggagcagctcaccgtcaaagccagcagaaataagacctggtggggtttta
aacaagaagaatttatgggaaggcctcagtgacgctttaacttcaacaaaagatggaaag
gaaaactccaccaaaagatataaatatgtggtgacgggtcacggcaaatatgcaaaagtt
ccaggtcacggctgcaatgaagatctaaactgccagctggacagttcaatgaagagttgt
gaagcaggtgttgttgaaaactga
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integrated database retrieval system
