Cyprinodon variegatus (sheepshead minnow): 107083890
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Entry
107083890 CDS
T06110
Name
(RefSeq) neurofascin-like isoform X1
KO
K06757
neurofascin
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107083890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvg04515
]
107083890
Cell adhesion molecules [BR:
cvg04515
]
Immunoglobulin superfamily
L1 family
107083890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
fn3
Ig_2
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_6
Pur_ac_phosph_N
V-set_CD47
BiPBP_C
Adeno_E3_CR1
AMP-binding_C_2
Motif
Other DBs
NCBI-GeneID:
107083890
NCBI-ProteinID:
XP_015228911
Ensembl:
ENSCVAG00000004099
UniProt:
A0A3Q2DQM5
LinkDB
All DBs
Position
Unknown
AA seq
1179 aa
AA seq
DB search
MKTLAGPGLLLLLWQSVWTLDVPLEIRQPPTIIKQSLQEHIVDPKDTMVIECEAKGNPHP
IFSWRRNGKYFNVARDPQVSMRGRSGTLDIYARNNPEQYIAEYQCIASNQYGSAYTHKIR
LQLYRPPVWPREILEPVVISAGLPLVLPCDPPPGPPKPETYWMSSCSYARPFTWPIQTAF
PTMQAVEQDRRVSMGVNGDLYFSNVLVNDSTADYCCNARFPYKNMIQQKMPVVVKVLTTR
TVAEAAPTWLSPRGSSSSILVLQGEELLLECIAAGVPTPHITWTKNGEDLPVTSRIKLKN
FNKMIQIQKASFEDAGEYICAATNNIGYIEHTITVRVKAAPFWLEKPTDLILAPEENGQL
VCRSDGAPRPTISWFINGEPIETSTPQPNRQVSGETITFRTVTTENTAVYQCNASNEYGY
LLANAFVNVLHATPRIIGPRNELIKTIAGNRAFLDCRFFGSPVPELRWSKYGQGNLEGNR
FKTHSNGTLEIKRIQIEDQGTYLCVISNIAGRDEIQVRVEVKEPIIIVTRPQSMKVMRGS
DVRLECGVQADITTPITTTWMKNKKQAQLNWRVTLDESNLVITNVNRGDEGNYTCVVRNE
LEQKSASAHLMVMDRPNPPTNLVLSDPYERTVRLTWVPGDSNHSPITEYLVQYDDDDWIP
GKWKNLSTYPGNLNSVILHLSPFTYYEFRVIAMNEIGSSRPSLPSKRFQTSGAPPDVIPK
NVKGVGTWRNNMEISWEPLTWREWNGPHLKYLVWWRRRDSREEWKNATTKWLKYYIYDAD
TFTPYEIKVQAVNDFGLGPESPVVIGYSGEDRPIAAPLNLRVSDIESTQVQVHWDPVTRE
SIMGELKEYKVYYWRDSSQLRWHRVNRGMKSKAFLNDDPEPSGVLTGLIPYSNYKMYIVV
ANSRYEGPPSNNIHFSTPEGVPSAPRAFRIQQRHLDSIYVDWDLPEEPNGVITGYSLKYQ
TVNATRGEELKVEEFPPNVTSFSIRRYDRYTRYRFSVAAQTRIGLGEWHTEESPHYTTEI
YAQDQVDISTQGWFIGIMCAVALIVLILLIVCFIKRSRGGKYPVRDKKDISLEPVDDKDQ
EGSFDYRSLERIARVSTLLYPRREEERGLQRAQPSVDAIMKRSDSDDSLVEYGEGGEIQF
NEDGSFIGQYTGTRRDVRDLDFGGNLELHSPMKTIYSLA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgaagacactggctggaccagggctgctgttattactgtggcagagtgtttggactttg
gatgttcctcttgaaatcaggcaacctccaaccatcataaagcagtcattgcaggagcac
attgtggatcccaaagacacaatggtcatagagtgtgaagccaaaggcaaccctcatcct
attttctcgtggcggcgtaatgggaagtattttaatgtggcccgtgacccccaggtgtca
atgcgcgggcgctctgggacacttgacatctatgcccgaaacaatcctgaacagtatatt
gcagagtatcagtgcattgcttccaatcaatatggatctgcgtacacccacaagataaga
ctacagttatacagacctcctgtatggccacgggagatactagagcctgttgtaatcagc
gcaggccttcctctggtcctgccttgtgaccctccaccaggcccacctaaacctgaaact
tactggatgtctagctgttcgtatgcaaggcctttcacctggcccattcagacagctttt
cccaccatgcaggctgtggagcaggaccgcagagtttccatgggggtcaacggagatctt
tatttctctaatgtgctggttaatgactccactgctgattactgctgtaatgctcgattt
ccttataagaatatgattcagcagaagatgcctgtggttgttaaggtgcttacaactcgc
acagtagctgaggctgctcccacttggctgtctcccagaggttcatccagctccattctt
gttctacaaggagaagagctgcttctcgagtgcatagccgcaggggtgcctactcctcac
ataacctggactaagaatggagaggatctccctgtgacatcacgcataaaactgaaaaac
ttcaacaaaatgattcaaattcaaaaggcgtcttttgaagatgctggagaatacatatgt
gcagctaccaacaatattgggtatattgagcacacaataactgtcagggtcaaagcggct
cctttctggttggaaaagcccacagatttgattttggctcctgaggaaaacggacagctg
gtgtgtcgctctgacggggctcctcgaccgacgataagctggttcattaatggggaacca
attgagacttctacacctcagccaaacaggcaggtttctggagaaacaataacctttcgc
actgtgaccaccgagaacacggctgtctatcagtgcaacgcatccaacgaatatgggtac
ctgctggctaatgcattcgtcaatgtgctgcatgcaactcctcgtattatcggaccaaga
aatgagctcataaagactatcgcgggtaatcgagcctttttagactgccgcttctttggt
tctcctgtgcctgaactacgatggtcaaaatatggacaaggaaaccttgagggaaatcgt
tttaagactcacagtaatgggactttggagatcaaacgcattcagatagaagaccaggga
acctacctgtgtgtgatcagcaacattgcagggagagatgaaattcaagtcagagttgag
gtcaaagagcccataataatcgtcaccagaccacagagtatgaaagtcatgcgcggaagt
gatgtgcgcctcgaatgtggcgtacaagcagatatcacaactccaatcaccacaacatgg
atgaaaaacaaaaagcaagcccaacttaattggagggtcactttggatgaatcaaatttg
gtcattactaatgtaaatagaggggatgaaggaaattacacatgtgttgttagaaatgag
ctcgaacagaagtctgcatcagcgcacctaatggtgatggaccgtccaaatcctcccact
aacttggtgctgtcagatccatatgaacgtactgtacgactcacttgggttcctggagac
agcaaccacagccccattactgagtatttagtgcagtatgatgatgatgactggatacca
ggaaaatggaaaaacctatcaacatacccaggaaaccttaactctgtcattctgcatctc
tcacctttcacctactacgagtttagagtcattgctatgaatgaaattgggtccagtcgt
ccaagtcttccatctaagcgcttccagacaagcggtgcacctccggatgtcattccaaag
aatgtgaaaggtgtgggtacctggagaaataacatggaaattagctgggagcctcttaca
tggagagagtggaatggaccacacttgaaatatctggtgtggtggagaaggcgagattcc
agggaggagtggaaaaacgccaccacaaagtggctgaagtattacatttatgacgcagat
acattcaccccctatgagatcaaagtccaggcagttaatgactttgggcttggaccagag
tcacctgtggtcattggttattctggggaagaccgtccaatagcagcacccctgaacctg
agagtctctgacatcgagagcactcaggttcaagtacactgggacccagtgacacgtgaa
tcgattatgggagaactgaaagaatacaaggtctactactggagagacagcagccagctc
aggtggcacagggtcaatagaggcatgaagtccaaagcgtttttaaatgatgatccagaa
ccctcgggtgtactcactgggctcattccctacagcaactacaagatgtacattgtagtg
gcaaacagtcggtatgaaggaccaccaagtaataacatccacttctccactcctgaagga
gtaccatctgctccaagagctttcaggatccaacaacgacacctggacagtatttatgtt
gactgggatctaccagaagagcctaatggtgtcatcactggttacagcctaaaataccaa
acagtgaatgcaaccagaggagaggagctgaaagttgaggagtttccaccaaatgtaaca
agtttctctattcgacgatatgaccgctacactcgctacagattctctgtggctgcgcaa
actaggattggactgggagagtggcatacggaggagtctccccactacaccacagaaata
tatgctcaggaccaggtggacatttccactcaagggtggttcattggtattatgtgcgct
gtggctctcatcgtgctaatcctcctaatagtgtgtttcatcaagagaagccgagggggg
aaatatccagtgcgggacaaaaaggacatttcattggagccagtggatgataaagatcaa
gagggatcatttgattacagatcccttgaaaggatagcacgtgtctcaactctgctttat
cctcggagagaggaggaaagagggcttcagagagctcagccatctgtggatgcgataatg
aagcgatcagacagcgacgacagcctcgtggaatatggagaaggaggagaaattcagttt
aatgaggatggttcattcattggccagtacaccggaacaaggagagatgtgagggacttg
gactttggtggaaatctagaactccattcaccaatgaaaaccatctattctctggcatga
DBGET
integrated database retrieval system
