Cyprinodon variegatus (sheepshead minnow): 107084071
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Entry
107084071 CDS
T06110
Name
(RefSeq) sorting nexin-27-like
KO
K17936
sorting nexin-27
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107084071
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
107084071
Membrane trafficking [BR:
cvg04131
]
Protein recycling
Others
Others
107084071
Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
107084071
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
RA
SNX17-27-31_F1_FERM
RA_2
PDZ_2
VirE3
SNX17_FERM_C
SNX17-31_F2_FERM
USP7_C2
DarA_N
Motif
Other DBs
NCBI-GeneID:
107084071
NCBI-ProteinID:
XP_015229217
Ensembl:
ENSCVAG00000017700
UniProt:
A0A3Q2D8J2
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MADVVGDESRPAHPAATRQHVPVVGSSAGQNAATVTSGPRVVRIVKSESGYGFNVRGQVS
EGGQLRSINGELYAPLQHVSAVLPGGAADRAGIAKGDRILEVNGVNVEGATHKQVVDLIR
AAEKELVLAVLSVPPQEADGLEGGEDIQPNYDYSDKQAVPISIPTYKHVEQHSERFVVYN
VYMSGRQLCSKRYREFAILHQNLKREFSNFNFPKLPGKWPFSLSEQQLDARRRGLEEYLE
RVCSVRVIGESDIMQEFLSESDENYNGVTDVELRIALPDKTTISVRVRKNSTTDQVYQAL
VLKVGMDSIMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLALRKWLFSI
QEEELLRDNPLALHYCFHQALDDVKKGFIKTEDKSYQLQKLAEQRKMATYLSLLRTCEGY
NEVVFPHCSCDSRRKGHVITAISIHHFKLHACTEDGTLENQVIAFEWAEMQRWDTDEEGM
AFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKQVEEEASDKDNKNCSNSEF
LPPLETQQKGWRHLGGEIATS
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtggtcggcgatgaaagtcggcctgctcaccccgcggcgacccgccagcac
gttccagtcgtcggttcgtctgcgggccagaacgcagcaacggtaacgtctggtcctcgg
gtagtgcggatcgtcaagtcggagtccggctacggttttaacgttcgcggtcaggtcagc
gagggaggccagctccggagcatcaacggggaactgtacgctccgcttcagcacgtcagc
gctgttctacccggaggagcagcagaccgagcggggatagcgaagggtgacaggatcctt
gaagtgaatggggtaaatgtggaaggtgcgacccataagcaggtggtggacctgatccgt
gctgcagagaaggagctggttctggccgtgctgtccgttcctcctcaggaagccgatggg
ttagaaggcggcgaggatatccagcctaactacgactacagcgacaagcaggctgttccc
atttccatccccacatacaagcatgtggagcagcactcggagaggtttgtggtttacaac
gtgtacatgtcaggcagacagctgtgctcaaaacgctatagagagtttgccatcctgcac
caaaacctgaagagggaattctccaacttcaacttcccaaagctgcctggtaaatggccc
ttctctctctctgagcagcagctggacgctcgtcgtagaggtctagaggagtacctggag
cgagtttgttctgtgcgggtgataggggagagtgacatcatgcaggagttcctctccgaa
tcagacgagaactataacggagtcacagatgttgagctgcggatagcgctgcctgacaaa
accaccatatccgtccgagtgcgtaaaaacagcacgactgaccaagtgtaccaggcgttg
gtgctgaaggttggaatggacagcatcatggccagctactttgctctttttgaagtcatc
aaccattcatttgtgaggaaacttgccccaaacgagttcccccacaagctttatgtgcag
aactacacatcagcggttcctggaacatgcttagcactccgcaaatggttgttcagtatc
caggaggaagagttgctcagagacaaccccctggcccttcactactgcttccaccaggct
cttgacgatgtgaagaagggattcataaaaactgaggacaaatcctaccagctgcagaaa
ctggcagagcagcgcaagatggccacatacctgagcctgctgcggacatgtgagggctat
aatgaggtggtcttcccacactgctcctgtgactccaggaggaagggccatgtcatcaca
gctatcagcatccatcacttcaagctgcatgcgtgcactgaggacggcacactagagaac
caggtaatagcttttgagtgggcagagatgcagcgatgggacactgatgaggaaggcatg
gctttctgcttcgagtatgccagaggagagaaaaaacctcgctgggttaagatcttcact
ccatatttcaactacatgcatgaatgctttgagcgcgtcttttgtgagctgaagtggagg
aagcaggtggaggaagaggcctctgataaagacaacaaaaactgtagcaacagtgagttc
ctgcctccactggagacgcaacagaagggatggcgccacctagggggagaaatcgccacg
tcctaa
DBGET
integrated database retrieval system
