KEGG   Cyprinodon variegatus (sheepshead minnow): 107084075
Entry
107084075         CDS       T06110                                 
Symbol
ubap2l
Name
(RefSeq) ubiquitin-associated protein 2-like isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cvg04121]
    107084075 (ubap2l)
   03400 DNA repair and recombination proteins [BR:cvg03400]
    107084075 (ubap2l)
Ubiquitin system [BR:cvg04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    107084075 (ubap2l)
DNA repair and recombination proteins [BR:cvg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     107084075 (ubap2l)
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A UBA_4 UBA_8 GIP1_N CUE
Other DBs
NCBI-GeneID: 107084075
NCBI-ProteinID: XP_015229224
Ensembl: ENSCVAG00000000444
LinkDB
Position
Unknown
AA seq 1189 aa
MMTSMGGNRARGSWEQTQSQTQSQTQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLV
DITGKDQDESMIALHDCNGDVNRAINVLLEGSPDTDSWEMVGKKKGVSGQKEISQAETGE
EGKENREKGGEKDAARRRGGAPRKGRGPSRGREFRGQENGLDGGKAGVAGRGAERGRRGR
GRGRGTIGVSGRRGGRFSAQGMGTFNPADYAEPAQTEENYGGGSTWNNTGSVELEEGARL
EYSAGEATNYPPKFDSAPGPWRAATEEWGTEDWNEDLSETKIFTASSVASVPVPQENVTI
TKGQRIDLAVLLGKTPPSSSSETENAPMEATQPPPLSQSLVFSNSKQVGPLSQTSSSSPY
SQHSMASMLSKGFGEVGDPKGGNTRTTGSQFLEQYKTAQALAQLAAQHSQTGPPGSAPSS
WDNSASTLGQYEMKTQSESGIHTPFTKRQPYQAATSTSSMLDVFLQDKGLPPSASVSSSS
LPQQTPTSPHVVPPPASSLPKMAAVSIGQQVSPSSSDAQGSSPLPLQQHKLKQQKKRTSI
STKIPAMAVEMPGSADISGLNLQFGALQFGSEPVLQEYESTPATTTPGNQVQNSLYTSPS
SESAPSISNSSQMEMYEQRAPQTRRYPPSVSSSPQKDVQSKNGFNSIQTTQSVDVSVKPP
SDSVTPSSISSMGTLTDSGSGPASLLTASNQTNLSDLSHNEDHPPSSIPPPQHNNSHPSQ
QNSLAPSSVRTSSSSLLHPNVDSDLSLHSSFSSTVSAVPSSSVPPSSSSMAGAQMSLGVP
QASSVGPATVSTPSAQGPVSSLAMGLNAASMGAPTAAPASISVSTTSSTVPSSATSSTRS
SAASSGKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQMYGYDDLQMLQTRIPLDYYSIPF
ATPTTALTGRDGSLTNNPYSGDLSKFSRGDASSPAPATTLAQTQQNQTQTHHTTQQTFLN
PALPPGYSYTSLPYYTGMPGLPNTFQYGPAMFPVAPTSSKQHGVNVGVNASATPFQQASG
YSSHGYSTGYEDVGQASGSGDFCKGGYGTAVAAAASAQNKPASSVTGPGVGVSVTSSNTG
VPDISGSVYTKTQSFEKQGFHAGTPAASFSLPSALGTGGPINPPAAAGYAPAPFMHILTP
HQQPHSQILHHHLQQDSQSSTGQRSQNASIQQKTQINKSAYNSYNWGGN
NT seq 3570 nt   +upstreamnt  +downstreamnt
atgatgacgtccatgggcgggaaccgagcccggggcagctgggagcagacacagagccag
acacagagccagacacagcacaagcagaggcctcaggccaccgcagagcagatccgactt
gcgcagatgatttcagaccacaacgatgcagactttgaggaaaaggttaaacagctggtc
gacattacaggcaaggaccaggatgagtctatgatcgcgctgcatgattgcaacggggat
gtcaacagagctattaacgtgttgctggagggcagcccagacactgactcctgggaaatg
gtgggtaagaagaaaggggtgtcggggcagaaggaaatcagccaggcagaaactggcgag
gaaggaaaagagaacagagagaaaggtggagagaaagatgctgcacgtcgtcgaggtgga
gctccacgcaagggccgtggacccagccgaggacgagagttccgaggccaggagaatggc
ttagatggtggcaaagctggagtagctggaagaggagcagagcgaggcagaaggggcaga
ggcagaggaaggggaactattggagtatctggacggagagggggcaggttttcagcacaa
ggcatggggactttcaaccctgctgactatgctgagccagcccagactgaggaaaactat
ggagggggcagtacttggaacaacacaggaagtgtggagttggaggagggagcaaggttg
gagtattctgcaggagaggcaacaaattacccaccaaagtttgactcggctcctggtccc
tggagagctgccacggaggagtggggcactgaggactggaatgaggatctttcagagacc
aagattttcacagcttccagtgtagcttcggtcccggtgcctcaagagaatgttacaatc
accaaaggacaaaggattgaccttgcggtgctgctggggaaaactcctccatcctcatcc
tcagagacggaaaatgccccaatggaggccactcagcccccccctctgtcccagtctctg
gttttcagcaattccaagcaggtcggaccactttcccaaacttcctctagcagcccatat
tcccagcacagcatggccagcatgcttagtaaaggatttggggaagtgggagaccctaaa
ggaggtaacacaagaactactggttcccagttcctggagcagtataaaacagcccaggct
ctggcccagctggcggcacaacactctcagaccggacctcccggcagcgcgccttcatcc
tgggataacagtgcctccacactggggcagtatgaaatgaagactcagtctgaatctggg
atccatacaccctttacaaagcggcagccctaccaggctgccacctcaacttcgtccatg
ttggatgttttcctgcaggacaaagggctgcctccatccgcctcagtctcatcatcctcc
ttaccgcagcaaacaccaacatcaccccacgtggtaccgccacctgcttcttcccttccc
aaaatggcagctgtctctataggtcagcaggtctcccctagttcctccgacgcccagggt
tcaagtccactgcctttacagcaacacaaactcaaacagcagaagaagagaacttctatt
tcaacaaagattcctgcaatggcggttgaaatgcctggctcagcagacatttcaggcctc
aaccttcagtttggagcgctgcagtttgggtcagaaccagttctacaggaatacgagtcc
acccctgcaactacaacacccggcaaccaagttcagaacagtctctacacaagcccaagc
agtgaatcggctccatcaatttccaattccagccaaatggaaatgtacgagcagagagca
cctcagacgcgccgttacccaccgtcagtctcctcctctccccagaaggacgtgcaatcc
aagaatggcttcaattcaatacaaaccactcagtctgttgacgtatcagtgaagccgccc
tctgattcagtcacgccttcatccatctccagcatgggcactttgacagacagtggctca
ggccccgcctccctgttgaccgcatccaatcagacaaaccttagtgatctgagccacaac
gaggaccacccgccaagttccatcccccctcctcagcataataactcccacccatcacaa
cagaacagtcttgctccatcttcagttcgaacatcaagctcaagcttactgcatcccaat
gtagacagcgacttgagcctgcactcatccttctcttccaccgtctcggctgtgccatcc
tcatcagtccccccctcatcttcctccatggctggtgcacagatgtctctgggagtacca
caggcctcctcggtgggccctgctacggtctcgactccctcggcccaaggacccgtcagc
agtctggcaatgggcctcaacgctgcctccatgggggcaccgacagcagcccccgcctca
atctcagtctctacaacatcatcgaccgttccctcctcagcaacctcttccacacgcagc
tctgcagcttcctcagggaaagcacctccaaatctgcctcctggtgtaccccctctactg
cccaacccatacatcatggctcctggactactgcatgcttacccccctcagatgtatggc
tacgatgacctacagatgttacaaacaagaataccattggattattacagcattcccttt
gcgactccaacgacagcactaactggcagagatggtagtctgacaaacaacccatactcc
ggcgacttatcaaagttcagtcgaggtgatgcatcatccccggctccggccaccacgtta
gctcagacacaacagaatcagacccagacacaccacaccacacagcaaaccttcctcaac
ccggcgctgcctcctggctacagctacacaagcctcccttattacactggcatgccaggc
ctgcccaacaccttccagtacggacctgccatgtttccggtggctcctacctcttcaaaa
caacacggtgtgaatgttggcgtaaatgcatctgccacgcccttccagcaagctagtggc
tatagttcccatggatacagcactggctatgaggatgtgggccaggcttcagggagtggg
gatttctgtaagggcggatacggcactgccgtggccgctgctgcttctgcacaaaacaag
ccagccagctccgtcaccgggcctggagtcggagtttctgtgacgtcaagcaacacagga
gtgccggatatttcaggatctgtttacacaaagacgcagtcatttgagaagcagggtttc
catgctgggacgccagcagcttctttcagcctcccctcagcgctggggaccggtggaccc
atcaaccccccagctgccgctggctacgctccggcccccttcatgcacatcctgactccg
caccaacagccccactctcagattctgcaccaccacctccaacaagatagccagagcagc
accggacagcgtagccagaacgcctccattcaacagaagactcagataaacaagtctgca
tataacagctacaactggggaggaaactaa

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