Cyprinodon variegatus (sheepshead minnow): 107084118
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Entry
107084118 CDS
T06110
Symbol
gigyf1
Name
(RefSeq) PERQ amino acid-rich with GYF domain-containing protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107084118 (gigyf1)
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107084118 (gigyf1)
Surveillance factors
Other surveillance factors
107084118 (gigyf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
GYF_2
DUF1266
DUF6033
Motif
Other DBs
NCBI-GeneID:
107084118
NCBI-ProteinID:
XP_015229285
Ensembl:
ENSCVAG00000016693
UniProt:
A0A3Q2EAA0
LinkDB
All DBs
Position
Unknown
AA seq
1059 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYIKDNKVPEDM
QDKEFAAILQDEPMQPLALVPLTEEEQRNFSMSVNSAAVLRLMGKGVASAAPTGVVRGRG
AARGGRGRGRGEGGFYQRSIEDAEVGFSRSVREIHRSQSWDDRGERRFEKPLRREVGRPT
FEESSGPVAPARKEYTRADSDNWRTLREEQEEEEGEPGTNWRLSGLRRDDGGPRSAGWRE
HSGPGEGRRRKFDFDFRDSEGHGAGRRRAGSEGLEDDRDGLPEWCTDEEDGGMGTFDSSG
AFMPMKKGGKETILEEEFDFKGIEEEDDEEGFPDSERSNGEGDKDMESRTLLPAAGEDKM
KPPTPSSSPPHCAPPSLELQPGSGAPVMENSQMNSSHSVKASNVAGDGAASVGASKAQLS
PSVASNATSSSLPPPPSSSAAPLHPPSGGDTEDDEGLKHLQQEAEKMVASLQDTSLEDEC
FTQALQQQQESRNTAAALPLSHEAAMKWFYKDPQGEIQGPFTTVEMCEWFQAGYFTMTLL
VKRGCDEGFQPLGEVIKMWGRVPFAPGPSPPPLLVRQLPPTQRSQSTRGSSGTGNLEQER
LKKQQELATAALYQQLQQQQLFQLINRCSEQGMMPSMNRSMSVPDTGSMWDMHTSASQSS
GGEASLWDLTMNPNTQGPTLEQLQKLQERRDAELRAKREEEEQRKRREEKRRQQEEQKRR
VEEEELYRRKQRQELLMKLMQQQSPQQQGPGVGGSGWSSASSSGLSKAGKSLTMLEMQEA
ERILKQQQQRAQQQRHPSLSMGSSSLGGQWADGVGMWGGGLEGKGGSGGSSSSMGMWDEA
VKNQGGLRGNGNNNMGLKNSRSSPSLTDQYMMRRKRTEDEEKLLKLLQGMKPQDGFTTWC
EQMLHALNTSANNSSSSLDVATIVAYLKEVESPYAVLDFIRSYLGDTVEAKEFAKQFLER
RAKQKANQQRQQQQLSKEVGGLNMNFPLQDSMRGMNPSTLQSMFQANHMGKGSLYDNQGG
KMKKKPSMMLHSDPSILGYSFHNTGDCLGMNDMEMVEDY
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagactcttaacttcggcccagaatggcttcgtgcactgtccagtgggggg
agtgtgacgtctccccctccttcccctgccatgccaaagtacaagctggccgagtatcgc
tacggccgagaggagatgttagcactttatatcaaagacaacaaggtcccagaggacatg
caggataaggagtttgctgctattttgcaagatgagcccatgcagcccctggcactggtg
cctctcaccgaggaggagcagagaaacttctccatgtccgtgaacagcgcagcagtgctg
aggctcatgggaaagggagtggccagtgctgctcccacgggagtcgtccgaggacgaggg
gccgctagaggtggtcgaggccgaggccgtggtgaagggggattctaccaaagaagtatt
gaggacgctgaagtgggatttagtcgcagcgtccgagagatccaccgcagccagagctgg
gacgaccggggcgagcgtcgatttgagaagccgctgcggcgggaggtggggcgccccact
tttgaagaaagcagtggtcccgtggctccggcgaggaaggagtacacaagggctgacagt
gataactggcgcacccttagagaggagcaggaggaggaagagggggaaccaggaaccaac
tggagactctctggactccgcagggatgatggtggtcctcgctcagcaggctggcgggaa
cacagcggtccaggggaaggtcgcagaaggaagtttgatttcgacttccgggactccgag
ggtcacggtgctggccgccggcgtgcagggagcgagggattggaggacgacagggacggc
ctgcctgagtggtgcactgatgaggaggatggaggaatgggaacgtttgactcttctgga
gccttcatgccgatgaagaagggtggcaaggagacaatcctggaggaagagtttgatttt
aagggcatagaggaggaggacgatgaggagggctttcctgattcagagaggagcaatgga
gaaggagataaagacatggagagtagaactctccttcctgctgcaggggaagacaagatg
aagccgccaacaccctcctcctctcctccccactgtgccccaccgtcactggagctgcag
cctggaagcggcgctccagtgatggagaactctcagatgaacagcagccactctgtcaag
gccagcaacgtcgccggggacggcgcggcctccgtcggagcctccaaggcacagctcagc
cccagcgtcgcctccaacgccacctcctccagcctacctccccctccctcctcctctgct
gctccgctccaccctccctctgggggagacactgaggacgatgaaggcctgaaacacctg
caacaggaggcagagaagatggtggcttcactgcaggacacttctttggaagatgagtgt
ttcacccaggctctgcagcagcagcaggagagcaggaacacggcggctgctctgccgtta
tctcatgaagctgccatgaagtggttctataaagacccacagggagagatccagggtccg
ttcaccacggttgagatgtgcgagtggttccaggccggctacttcaccatgaccctgctg
gtgaaaagaggctgcgacgagggctttcagccactgggggaagtcatcaagatgtggggc
cgcgtgcccttcgcccccgggccctcgccgccgcccctgctagtgaggcagctccctcca
acgcagcgctcgcaatccacccggggatcctccgggactgggaacctggagcaggagcgg
ctcaaaaagcagcaggagctggcgacggcagctctttatcagcagctccaacagcagcag
ctattccagctcattaacaggtgcagtgagcagggtatgatgccttcgatgaacaggtcg
atgtcagtgccagatacagggtccatgtgggacatgcatacctcagcttcacagtcgtca
ggcggtgaagccagtctttgggacttaacaatgaatcctaatactcagggtccaactctt
gaacagcttcagaagctccaggagaggcgagacgccgaactcagggcgaagcgcgaggag
gaggagcagcgcaagaggagggaggagaagaggaggcaacaggaggagcagaagagaagg
gtggaggaggaggaactctacagacgcaagcagcgtcaggagttgctcatgaagctgatg
cagcagcagtccccccagcaacagggtcctggagtgggaggctcaggttggagcagcgcc
tcctcttctgggctttccaaggcagggaagtctctgaccatgctggagatgcaggaggca
gagaggatcttaaagcagcagcaacagagagcccagcagcaaagacatcccagtctgtct
atggggagctcctccttaggcgggcagtgggccgatggagtcggcatgtggggcggtggt
ttggaggggaaaggcggaagcggaggctcgtccagcagcatggggatgtgggacgaggct
gtgaagaaccagggcggcctgcgtgggaacggcaacaacaacatgggcttgaagaacagc
cgcagcagcccctcactgactgatcagtacatgatgcgtcgcaagagaacagaggatgag
gagaagctgctgaagctgctgcagggcatgaagcctcaggacggcttcaccacctggtgt
gaacagatgctgcacgctctcaacacctctgccaacaactcctcttcctctctggatgtt
gccactattgtggcttacctgaaggaggtggagtctccctatgcagtgctggatttcatc
cggtcctaccttggggacacagtggaagccaaagagttcgccaaacagtttctggagcga
cgtgccaaacagaaagccaaccaacagagacagcagcaacagctttcaaaagaagtgggt
gggttgaacatgaacttccctctgcaggactcaatgcgaggtatgaatccaagcactctg
cagtccatgtttcaggccaaccacatgggcaaaggtagtctctatgacaaccagggagga
aagatgaagaagaaaccatccatgatgctgcactctgatcccagcatcttgggttactca
ttccacaacacaggcgattgtctgggcatgaatgatatggagatggtggaggattactga
DBGET
integrated database retrieval system
