Cyprinodon variegatus (sheepshead minnow): 107084186
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Entry
107084186 CDS
T06110
Name
(RefSeq) F-box only protein 40-like
KO
K10315
F-box protein 40
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107084186
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107084186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box-like
F-box
Sina_ZnF
zf-TRAF
Motif
Other DBs
NCBI-GeneID:
107084186
NCBI-ProteinID:
XP_015229382
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MSHRSRASRTRQHLHCDSCYSRRCRARVEVGVSCALAPCRLLCGAVYHLCKEEDHLLLCP
NVRVPCLNAEYGCMVQLPRSSRAAHLQVCPASVVSCSMEWLRWPIDETNPHGFSALQHNI
MKGDDTQGNALDVAMALVDQSDLYTRLQMKPLYPELTEPEQEEIKEEIKEDAAVGGFSFL
DQKDSEDIPGSSMCESNSVDETAQSNVTQTPTINTEKYNLFEMMFSMEKRACAVAQENLE
NPKQDQNPAEEGRGQRGADQERQKKAEADSSAAARSLPPPDTSKTGLAPWQEGVLERLGQ
ELTPQEYNMYMVHQGRMLITFQQIEACTPREKDFVYGSLEPIPVQTLRSFKAPVSYRYKR
RVHYYETTGRAKTEHQSVDTSDLGANEEDWFSDEAAATLLGYAELAIMGHKISETNGGDG
FYVDIGTQTHTFRKAPFKQKTTLAEVMVDRPLKLLLQLQAESVNSRNNRASCAFTFLCGH
TFHRREFATHFRNAHSDIRGFIRPLRRPLSPTNPSPAPRSKSHEGERDDWLSLLPYEVLC
HVASFLDSLSLSQLALVSHLMRQVCSSLLQDRGMVTLRWERTNLSHGQDKWISKPVWEFS
HLFSAVDKWEMADLSSLSAHLTVCPYYQKTEQRERVPLPFITEIQQRSPKDQSLLNHFTG
RR
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatcgttctcgagcctccaggacccggcagcatctccactgtgactcctgctac
agtcggcgctgcagagctcgagtggaggttggtgtgagctgtgctctcgctccctgccgt
ctcctctgtggagcagtataccacctgtgcaaagaagaggatcacctgctgctttgcccc
aatgtcagggtgccctgcctcaacgcagagtacggctgtatggtccagcttccccgctcc
tcacgggcggctcacctccaggtgtgtccggccagtgtggtgagctgctccatggagtgg
ctgcgctggccaatagatgagactaacccacatggctttagtgccctgcagcacaatata
atgaagggagatgacacccagggaaatgctctggatgttgccatggctttagttgatcag
tcagacctatacacacgccttcaaatgaagccactttacccagagctcacagagccagag
caagaggaaataaaggaagagattaaagaggatgcagcagttggagggtttagttttcta
gaccaaaaggacagtgaagacattcctggaagcagcatgtgtgaaagtaattctgtggat
gaaactgctcagagcaatgtcacacaaaccccaactatcaacacagagaaatacaacctg
tttgagatgatgttcagcatggagaaacgggcctgtgctgtcgctcaggaaaatttagaa
aatccaaaacaagaccaaaaccctgcagaggagggaagagggcaaagaggtgcagatcag
gagaggcagaaaaaagcagaggcggatagctctgctgcagccagaagcttgcctccacct
gacaccagtaagaccggcctagctccctggcaggagggagttctggagcgcctgggccag
gaactcactccacaggagtacaacatgtacatggtgcatcagggacgcatgctaattaca
tttcaacagatagaggcctgcacgccgagggagaaagacttcgtttatggcagcttggag
ccaattcctgtgcagactctacgatctttcaaggcccctgtaagttatcgatacaagcgg
agggttcattattacgagaccactggacgggcaaagactgaacatcaaagtgtggacaca
tcagaccttggagccaatgaagaagactggttttccgatgaagctgcagcaaccctcctt
ggctatgctgaattagcaattatgggtcacaagatcagtgagacaaatggaggagacggg
ttctatgtagatattggaacacagacacatactttccgcaaagctcccttcaaacagaag
acgaccctggcagaggtgatggtggaccggccgctaaagcttctcctgcagcttcaggcg
gagagcgtaaacagcagaaacaacagagcgagctgtgcgttcaccttcctctgtggccac
accttccaccgtagagagtttgccacacacttcaggaacgcacacagtgatatccgaggt
ttcatccgtccactcagaaggccactgtcacctacaaacccctctcctgctccaagaagt
aaaagtcatgaaggagaaagggatgactggctgagcttgttgccctatgaagtgctatgc
catgtggccagcttcctggacagcctatccctgtcccagctggccctggtgtcccatctc
atgaggcaggtgtgctcctctctgctgcaggacagagggatggtgaccctccgctgggag
agaacaaacctctcacatggacaagacaagtggatttccaaacctgtgtgggagttcagc
catttgttctctgcagtggataaatgggaaatggcagatttatcttctctttctgctcac
ctgacagtctgtccttattaccagaaaactgaacagagggaacgagtcccccttcccttc
attactgagatacagcaaaggagtccaaaggatcagagtctcctcaatcattttacagga
agaagatga
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