Cyprinodon variegatus (sheepshead minnow): 107084245
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Entry
107084245 CDS
T06110
Symbol
obsl1
Name
(RefSeq) obscurin-like protein 1
KO
K19574
obscurin-like protein 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107084245 (obsl1)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
107084245 (obsl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
Ig_6
Izumo-Ig
Ig_5
Ig_4
C2-set_2
V-set_CD47
VEGFR-1-like_Ig-like
Ig_C17orf99
fn3
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
107084245
NCBI-ProteinID:
XP_015229477
LinkDB
All DBs
Position
Unknown
AA seq
2206 aa
AA seq
DB search
MDILGGAPRVLGYPRPVVAQCGTDVTLRCQIGGDPPPDVIWEHKNFQIISEGRYKISEEG
KTYLLNISRVTQEDAGQYICKARNSIGETYAAASLKVEGELLENNREIIQLKENGVNQCG
DFGENLNGYMLENGAKDREMNGEHKWKGQANEELKEFDLPLNEKPRFLIKPLSLRVDCGE
DATFSCKIWGTPSPEVTWEKDGKKLNDIFESSHFNMGSEDGGWFQLKLYRTRMPDKGVYT
CRATNCHGEALAGAVLLVEPIPQREESKISSNSHISSQRSPKHKSGRFSLSKLAEEPPIN
ISEVKKFVVAEGKHAKFRCFVTGKPKPEIIWKKDRVPLEPDRRHLVFEDREGFYTLKVLY
CKMQDTGLYVCAASNALGNTLSAVHLTVKGPAVRFRRPLKDLEVKERDVAVLECEVPDET
IPAAWYLEDQRLMPSSKYGMEQRGTRRRLTIHDVGMDDDGVYICEMPDGGKTIAELAVKG
TIVRKLPRKMEVLEGENAAFCVEVENDDMEIHWFKDGLKLHETHQTILKSFGKTHILVFV
NVAHHDSGVVTFVAGRSKSSSRLKVKATRHCPPICPVGVKMNTERPNSAYLTWSPAPNSQ
TTTRSMFVLEMQELGSQKWQKCFTSETATSAEISGDSIPCEGDYRFRVCCINKYGRSGHV
EFPKVVHLVPGPKIHKPLQGCEVMEGEDAHFSIELSAPMVGTWFLNSSQLQHGGRYSVQQ
NQTKHSLVIHGTGAADDTAEVTFIANGVRDSAILKVKPAVFKFIPLSELDSYKRVETGDA
IVLYCEVNHPFAKVSWFKDNEELQVSNELNIQSDGNMRRIVIQSAEASHSGVYTCQTSGD
VIKFNVDVEGPPVEFSPVSEEELHKNSMELDPVVLLCHVSRDDAEVFWYKDGCEIQASDN
ITVQKEGTMRRLIIRSAEASDAGSYVCKSGSNSIEFIVNIREPTVMIVEPKDDIVMTYYV
SEEINLQCELSRTNGKVNWFKDGEEVQESDNIQLKSEGPYRRLTIPCGSAMDSGEYVCET
DGDSVFYLITVTEPPVRILSPGESEVELTHVAPERLELCCEISQANALVRWYKDSLEVEE
SPNLILEVDGAQRRLVIPLTTVDDTGEYICDTENDSVAFLVNVTEPPVTLSRLKNTPDRL
EGFAGKPIVLEIEVSRPTAEVKWLLDGKKIEQSSDITIVEDGLFRRLIINSPTPEDSGKY
TCDAVDDQIDFQVKVSEPPVKILRKSEIKTDLKFLVSDDIELECELSRANGNAKWYKDGC
RVQDDERFCKEEEGAFRSLVILNAELKDSGEYFLDVGDDNISFQVTVEEPPVKIVGNSYD
PDYQELMAGDDLILACEVSRANAPVQWYCNDRPLTSDSRTFIESYGTLRKLIISNIETSD
SGKYVCDAVTDKMINVIRIQEPPVTFVNKEDDVVLTGYEAESVTLTSYVSKESAVVRWLK
DWTPVEGERFREIMEGHKRSLIIQPLRRSDAGEYTCDVNTDQMHFSLLVKEMRIKFVRPL
EDTVAHADGMVTLRCEVCKPKADVQWLKNGVEVVGSRRFSIRADGVERSLTIHRLTQEDA
GQYACESRDDRTVAMLRVEMPRVVEFLTELHNTTVLEGEDATFKCVVSPEDVHLIWLMDN
EPITLGERFQVSRNGLCHTLVIKKCQMIDCSKIAAEAEGKISKASLKVQEAQVMFTRKME
AVTAEEFGEATLETEISLETGEVQWMRQGVVIQSGPRHTLGQNGFRRSLTIHNLTLSDRG
TYRCETLHDRTQVKLNVEPRKISIRKGLTDQETFERETASFEVEVSHADVEGIWQKDGIR
VKPSNQFRVSINGLIHSLTLTNLTLEDTGTIVFTAEGVRSTARLTVKETPVAVLKPLVDV
RVEEEFPVTLECEFSRQNVEVSWLKNGTELKPGKNLRIYSMGRKRFCQILQCSIADSGSY
TCDTGDISTVCSLEVYEHELEILQDLEDLYIQEDQNAVFMCEVSLEDVTGEWFRDGHKIR
PSSTIKIRNEGTKHFLLMCNVKVEDAGEIRFVARDVESTAYLEVEELPVSIVKPLRDRTA
LEKHRVILECTVSSPRCDATWYKGKQELEPSERMEIIAEGCSHKLVINQVVVEDEGTYSI
QVGEHTSKAKLLVEAQALVMLKELEDVEVMEPEAATFQCEVSVAINKPPVWTLNGETLQS
GPSVRLEDQGTVHKLTLRDTCVDMSGTVRFTLGKAKSSATFTVMGK
NT seq
6621 nt
NT seq
+upstream
nt +downstream
nt
atggatatcctcggtggggcacctcgtgttttgggctatccacgccccgttgtggcacag
tgcggaacagatgtgactctcagatgccaaattggtggagatccacctccagatgttatt
tgggagcacaaaaattttcaaattatctctgagggacgatacaagatatcagaggaggga
aaaacttacttattaaacatttctagagttactcaagaagatgctggtcaatatatttgc
aaggcaagaaacagcattggggaaacctacgcagcagcatcactcaaagtggaaggagag
cttcttgaaaataatagggaaattatacaattaaaggaaaatggtgtaaatcaatgtgga
gactttggggaaaacctaaatgggtacatgttagaaaatggtgcaaaagatagggaaatg
aatggagagcacaagtggaagggtcaagcaaacgaagaactaaaggagtttgatttacca
ttaaatgagaagcccaggtttctcattaagcctctgtccctacgtgtggattgtggagag
gatgccaccttttcctgcaaaatctggggaacgccttcgcctgaggttacttgggagaaa
gacgggaagaagctcaatgacatctttgagagctcccactttaatatgggaagtgaagat
ggaggctggtttcagctcaagttgtataggacacgcatgccagacaaaggggtctacacc
tgcagggctacaaactgccatggtgaggccttggcaggagctgttcttcttgtcgagcca
attccacagcgagaagagagtaagatttcttcaaacagtcacatcagcagtcagaggtcc
cccaagcacaaaagcggacggttcagtttgtcaaagcttgcagaggaaccgcccatcaac
atatccgaagtcaaaaagtttgtagtggcagaagggaagcatgccaagtttcgctgcttt
gtgacgggcaagcccaaacccgagatcatctggaagaaagatagggttcccttagaaccc
gacaggcgtcatttggtatttgaggaccgtgaaggtttctacacgctgaaggttctctac
tgtaaaatgcaggatacagggctgtatgtatgtgctgcatcaaatgctctgggaaacacc
ctgagtgctgtacacctcactgtgaaagggccagctgtgcgtttcagacgcccattaaaa
gaccttgaagtaaaggaaagggatgttgccgtgctggagtgtgaggtaccggatgagaca
atccccgctgcttggtacctagaggaccagaggctaatgccaagcagtaaatatggaatg
gagcagagaggaaccaggcgacgactcaccatccatgatgttgggatggatgacgatggg
gtttacatttgtgagatgccagatggaggaaagaccattgctgagctagcagttaaaggc
acaattgtccgcaaactacctcggaagatggaagtgctagaaggtgagaacgctgcgttc
tgtgtcgaggttgagaatgacgacatggagatccactggttcaaagatggtttgaagcta
cacgagacacaccagacaatcctcaagtctttcggcaagactcacatcctagtctttgtc
aacgtggcccatcatgactcgggggttgttacatttgttgcaggaagatctaaaagctca
tcacgtctcaaagtcaaagcaacaagacactgcccaccaatctgccctgtgggtgtcaaa
atgaacacagaaagacccaacagtgcttatcttacctggtcgcctgcacccaacagtcag
accaccacacgttctatgtttgtcctggagatgcaagagcttggttctcagaagtggcag
aaatgcttcacctcagagactgccacctcagcggaaatctcaggtgacagcattccatgt
gaaggggactatcgttttcgtgtctgttgcatcaataagtacggacgcagtggtcacgta
gagttccccaaagtggtccacctcgtcccaggacccaagatacacaagcctctccaaggc
tgtgaggttatggagggtgaggatgctcacttctccattgaactctctgcaccaatggtt
ggcacctggtttctaaacagctcccagctgcagcatggtggaagatattcagtgcagcag
aatcaaacaaagcactccttggtgatccatggaactggagcagctgacgacacagcagag
gtcacatttattgccaatggagtgagggattcagctatcctgaaggttaaacccgcagtg
ttcaaattcatccctctgtctgagttggacagctataagagagtggaaaccggggatgcc
attgtgctctactgtgaggttaaccatccctttgctaaagtatcctggttcaaagacaat
gaagaactccaggtgagcaatgagctgaacatccaatcagatggtaatatgagaagaatt
gtgatccagtctgctgaagcatctcactctggagtttatacgtgtcaaacttcgggggac
gtgattaaattcaatgtggatgtcgaaggacctccagtagagttcagtccagtgtcagag
gaagagcttcataagaacagtatggagctggatccagtggttctgctttgccacgtctcc
agagatgatgccgaagttttttggtacaaagatggctgcgagatccaggcgagtgacaac
attacggtccagaaagaaggcaccatgaggaggctaataatccgctctgcagaagcgtca
gatgctggaagttatgtctgcaagtctggaagcaacagcattgagtttatagtcaatata
agagagcctacagtgatgattgttgaacccaaagacgatatcgtgatgacatactatgta
tcagaggagattaacttgcaatgcgagttatctcggaccaacgggaaggttaattggttt
aaggatggtgaggaggtgcaggaaagcgacaacatccagctaaaatctgagggtccttac
aggaggctgaccattccctgtggctctgccatggatagtggagagtatgtatgtgaaaca
gatggagactctgtcttctacctgataactgttacagagccacctgtgagaattctctct
ccaggtgaatcggaggtggaactcacccacgttgcgccagagaggcttgagttgtgttgt
gaaatctctcaggcaaatgctctggttcggtggtacaaagacagtttggaggtagaagag
agcccaaatttgatattggaggtagatggggctcaaaggcgactagttatacctttaaca
actgtggatgacacaggggagtatatatgtgacactgaaaatgactcagtggcatttctt
gttaatgtcacagagccccctgtgacactcagtcgactcaaaaacacgccggacagactt
gaaggttttgctggcaaaccaattgttctagagatagaggtgtcacgtcctacagcagag
gtcaagtggctgcttgatggcaaaaaaatagagcagagtagtgatatcactattgtagag
gatgggctatttcgccgtttgatcatcaattctcccactccagaagattctgggaaatac
acctgtgacgctgtagatgatcaaattgatttccaggtgaaagtttcagagccacccgtg
aagatcttgagaaagtctgagattaagacagatctaaagttcctagtttcagatgacatt
gaactagagtgtgagctctctcgagccaacggcaatgccaaatggtacaaagatggctgt
cgagttcaggatgatgaaaggttctgcaaagaggaagaaggtgcattccggtcattggta
atccttaacgcggaactcaaggattcaggagaatacttcctagatgttggggatgacaat
atcagcttccaggtcacagttgaagagcctccagtgaagattgtaggaaactcctatgac
cctgattaccaagaactaatggcaggtgatgacctgatactggcctgtgaggtgtcccgt
gctaatgcccctgtccagtggtattgtaatgacaggcctctcaccagcgattcccgtacc
ttcattgaaagctacggaactctgagaaaacttattatctcaaacatcgagacctcagat
tctggaaagtatgtctgtgatgcagtgactgacaagatgataaacgttatccgaatacaa
gaacctccagttacttttgtaaacaaagaagatgacgttgtgttgacgggttatgaggcc
gaaagtgtgactttgacaagctatgtgtctaaagaaagtgcggttgtgcgctggctcaaa
gactggacaccagttgaaggtgaacgctttcgagaaattatggagggccataaacgtagt
ctcatcattcagcctttgaggcgttccgatgctggtgaatacacctgtgatgtcaacact
gaccaaatgcacttcagtctattagtgaaagaaatgagaataaaatttgtgcgacccctc
gaagacactgtggctcatgctgatggtatggtaaccctacgctgtgaggtttgcaaacca
aaagcagatgttcaatggctcaagaatggtgtggaggtggttggaagcaggagattctcc
attcgagcagatggtgttgagcgaagcttgaccatccaccgtttaacccaagaggatgca
ggacagtatgcttgtgaatccagggatgatcggaccgttgcaatgctaagagtggagatg
cctcgagttgtggagtttctcaccgaacttcacaacacaactgtgctagagggagaagat
gccacctttaaatgtgttgtgtctcctgaggatgttcacttgatatggctcatggacaat
gagccgataactttaggggagcgcttccaagtgagtcgaaatggcctgtgtcacaccttg
gttattaagaagtgccaaatgatagactgctccaagattgcagcagaagctgaaggaaaa
atcagcaaggccagtctcaaagttcaggaagctcaggtcatgttcaccaggaaaatggaa
gctgttacagcagaggagtttggggaggctaccctggagacagaaatcagcctggagaca
ggtgaggtccagtggatgaggcaaggggtggtcatccagtctggtcctcggcataccctg
ggacaaaacggctttagaagaagcctcacgatacacaacctgaccctatcggaccgagga
acttaccgctgtgagaccctacatgacaggacacaggtcaaactcaatgtagaaccacga
aagatctccatacgcaaaggcctaacagatcaagagacctttgaacgggaaactgcctcc
tttgaggtggaggtctcccacgcagatgtggaaggaatctggcagaaagatggcatccgt
gtaaaaccaagcaaccagtttagggtgagcatcaatgggctcatccatagccttaccctg
acaaacttaactctggaggacacgggcaccattgtatttacagcagaaggggtgcgctca
actgcaaggctcacagtcaaagagacacctgtggctgtcctgaaacccctggtggatgtc
cgtgtggaggaagaattcccagtcactttagagtgtgaattctccagacaaaacgttgaa
gtcagttggcttaagaatggtactgagctgaagccagggaagaacctcaggatttactca
atgggacgaaagcggttctgccagatacttcagtgttccattgctgactctggttcctac
acatgtgacacaggcgatataagcaccgtgtgctcactagaggtttacgagcatgagctg
gagatactacaggatcttgaggacctctacatccaggaagaccagaatgctgtgttcatg
tgtgaggtctctctggaggacgtgaccggggagtggttcagagatggtcacaagatcaga
cccagcagcaccataaagatccgcaacgaagggaccaaacacttcctgctgatgtgtaac
gttaaagttgaagatgcaggagaaatccgttttgtcgcaagagatgtggaatcaacagct
taccttgaggtagaagaactcccagtttctatagtgaaaccactacgagacagaacggcc
ctggagaaacatcgcgttatcctggaatgcaccgtctcctccccgcgctgcgatgcaacc
tggtacaaaggcaaacaggaactggaaccttcagaacggatggagatcatagcagaaggc
tgttcccataagctggtgatcaaccaggttgttgtagaggatgagggcacttacagtatt
caggttggggagcatacatccaaagccaaacttctggttgaagcccaggccctggtgatg
ctgaaagaacttgaggacgtggaggtgatggagccagaggcggccactttccagtgcgaa
gtctccgtcgccatcaacaagcctcctgtttggactttaaacggagagaccctgcagtcg
ggcccttcagtccgtctggaagaccaggggacggtccacaagctcactctgagggacact
tgtgtggacatgagtgggacagtcaggttcaccctgggcaaggccaagagcagcgccacg
tttacagttatgggaaagtag
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integrated database retrieval system
