Cyprinodon variegatus (sheepshead minnow): 107084324
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Entry
107084324 CDS
T06110
Name
(RefSeq) DNA-binding protein SATB1-like
KO
K23225
DNA-binding protein SATB1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107084324
03036 Chromosome and associated proteins [BR:
cvg03036
]
107084324
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
107084324
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107084324
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ULD
CUTL
CUT
Homeodomain
DUF6366
Motif
Other DBs
NCBI-GeneID:
107084324
NCBI-ProteinID:
XP_015229601
LinkDB
All DBs
Position
Unknown
AA seq
904 aa
AA seq
DB search
MDPMCDGVKKTESNDATVNPRPPPAKIARLEQYKMGPSTPERGRQGSPAPKSPCSTQKST
TASWHSKGTLLPVFCVVEHRESSVEAEKRDDHAEFVLVKRDLLFNQLTEMALLTLGYSHS
SAAQAKGLIQVGRWNPVPLSSVTDTPDATVADMLQDVHHVVTLKIQLNSCPKLEDLPAEQ
WSISNVRNALKELLKDMNQSSLAKECPLSQGMISSVVNSTYYANVSAAKCHEFGRWYKHF
KRSKCHKDSECFPEQSIEITHTQQSIPSSPVDQNSNLPFPVANICGRPSLGLHPPGLPPQ
HLSSQMVNQQLMMTQFLNQQYAVTRMLAGQALSSSPQQYLNHPPVGRPPAKTFIKASDSQ
ASPQAQCGPGGCQAIMTQNQTGATASSVAQTDVPSDIYQNVREELRRAGISQAIFARVAF
NRTQGLLSEILRKEEDPKHASQSLLVNLRAMNSFLQLPEAERERMYQEEKERSMTGFPPN
CNTTPPRSTQARLSPVTAERGLRTDSCVLNVNASIYEEIQQEMKRAKVSQALFAKVSVSK
SQGWLCELLRWKEDPCPENRTLWENLCMIRRFLSLSQIERDAIYEQESGSGTSQHCADRL
MMLSNESTLHQRNSMMSHQPHLQPHHPLQPEPGLDLSPPQPCTASPAESEAGGAWGHFKV
NLQSRNSWDEERGDSLEWVDGEREDADILGADWGAPEGVGYICRDRDVQERDGTIDLPGQ
DSISQNCKTENVINNIFLNKSDVKRENNGRVGVCSGTDSKIIAKKVVQGDRLTVSNEALG
ILKSFIQDVGLYPDEEAIHTLSAQLGLPKDTIRVFFSSQDLEQSQDNNQSPKHIHNNQQV
CSNPDVFMAELTTQEQDVPVKAEKSETEMEKIGRDTASEVSISRESDVATQTLPPMKEEQ
ESYV
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggatccaatgtgtgatggagttaagaaaactgagtccaatgatgcgactgtgaaccct
cggccccctccagctaagatagctcgactagaacaatacaagatgggaccctcaactcca
gaaagggggagacaggggagtcctgcgcccaaaagtccttgctccacccagaaatccact
acagcaagctggcactctaaaggaacccttcttcctgtgttctgtgtggttgagcacagg
gaaagttctgtggaagcagagaaaagagacgaccacgctgagtttgtcttggtcaaaaga
gatctgttattcaatcagctgaccgaaatggctctactgacgctgggatactcccatagc
tctgctgcccaggctaaaggtctaattcaggtcggcaggtggaacccagtgcctctctcc
tctgtgactgatactcctgatgctacggtggctgatatgctgcaggatgttcaccatgtt
gtcacactgaagatacagcttaacagttgtcccaaactggaagacttgccagctgagcag
tggagtatctccaacgtgagaaacgctctgaaggagcttcttaaggacatgaatcagagc
tccctggccaaagagtgtcccctttcccagggaatgatatcatctgttgtaaatagcact
tactatgcaaatgtctccgctgccaagtgccacgagtttggtcgctggtacaagcacttc
aaaaggtccaaatgccacaaagacagtgagtgctttcctgagcagtccatagaaatcacc
cacacccagcaatcaattccaagcagcccagtggatcaaaactccaaccttcctttccca
gtggccaacatctgtggacggccatcgcttggtcttcaccctcctggtttgcccccccag
catctcagctcccaaatggtgaaccagcagctgatgatgacccagtttcttaaccaacaa
tatgccgtcacccgcatgctggctggccaggctctctcctcttcaccacagcagtatctc
aaccacccccctgtgggaaggcctcctgccaagacctttattaaagcttctgattctcaa
gcatcaccgcaagcacagtgtggtccagggggatgtcaagcaataatgacgcaaaatcaa
actggagctacagcgtcttctgtagcacagaccgacgtaccgagtgatatctaccagaat
gtgagggaggaactgaggagagcgggcatctcccaagccatctttgcacgagtggccttt
aacagaacccagggtttactctcagagatcttgaggaaggaggaggatccaaaacatgcc
tcccaatctctgctggtcaacctcagggccatgaacagtttcctgcagcttcccgaggct
gagagagagcgcatgtaccaggaagagaaggaaagaagcatgactggtttcccacccaac
tgcaacaccactcccccacgatccacgcaggcgagactgtcaccggttacagctgaaaga
gggttgaggacagacagttgtgttctcaatgtcaacgcctctatctatgaggagatccag
caggagatgaagagagctaaagtgtcccaagctctttttgcaaaagtttcagtctccaaa
agtcagggctggttgtgtgagcttcttcggtggaaggaggatccctgcccggaaaaccgt
actttgtgggaaaacctgtgcatgatccgacgcttcctcagcctctcccaaatagaacga
gatgccatctatgagcaagagagcggcagcgggacttcacagcactgtgctgacaggctg
atgatgctcagtaatgagagcacactgcaccaacgcaactccatgatgtctcatcaacca
catcttcaaccccatcacccgcttcagcccgagccagggcttgacctgtctccgccccag
ccatgtactgcatcaccagctgagtctgaggctggaggcgcctgggggcatttcaaagta
aatttgcagagcagaaacagctgggatgaggaaaggggagatagtctggaatgggttgat
ggggagagagaagatgctgacatcctgggtgctgactggggtgctcctgaaggggtgggg
tacatctgtagagacagggatgtgcaagaaagagatggaaccatagatctgccaggccag
gatagcattagtcaaaactgcaaaactgaaaatgtaataaacaacatatttttaaataag
tctgatgtcaagagagagaataatggcagagttggagtatgttctgggaccgatagtaaa
attatagcaaagaaagtggtccaaggtgataggttaacagtgtccaatgaagccctgggg
atcctgaagagcttcatccaggatgttggcctctatccagatgaagaagcaatccataca
ctctctgcccagctgggtttgccgaaagatacgatccgtgtcttctttagcagccaggac
ttagagcaaagtcaagacaacaaccagagtccaaagcacatacataacaaccaacaagtc
tgttcaaacccagacgtcttcatggcagaactaactacacaggaacaggacgtccccgta
aaggcagaaaaaagtgaaactgaaatggagaaaattggtagagacacagcaagtgaagtt
tctatttcaagggaatcagatgttgccactcaaacccttcccccgatgaaggaggagcag
gagagttacgtctaa
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