Cyprinodon variegatus (sheepshead minnow): 107084327
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Entry
107084327 CDS
T06110
Symbol
gpnmb
Name
(RefSeq) transmembrane glycoprotein NMB isoform X1
KO
K20732
transmembrane glycoprotein NMB
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107084327 (gpnmb)
Membrane trafficking [BR:
cvg04131
]
Endocytosis
Phagocytosis
Others
107084327 (gpnmb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PMEL_NMB_N
PKAT_KLD
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
107084327
NCBI-ProteinID:
XP_015229606
Ensembl:
ENSCVAG00000008949
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MRILQDLCLLAFYACCVYQADARQTYRDVFPHKHSLTGKFPFPIPPIPGWEPDTNPWDDY
LYPPLNSKPRELMHHRGKPKVRLTSDSPAINGSCITFTAKLEYPPCQREDANGDLVWDEH
CEDGTELEASANGQLRSGYVYNWTSWLDDYGFGKCTDKAKCNVFPDGKPFPQSNDWRRKS
YVYVWHTMGQYYETCDGSSSSVTINTTNIPLGAEVMEVMVYRKRERRKYSPLTNDNTVFL
ITDKIPLAVDISQKSAVNKSANVFIRGEEMVFKVRLHDPSGYLKTAASVDYIWDFKDGNQ
LVTHREVTTHTYSTLGIMNVKLVVEAAFPVECPPASATPTPRRPTSPPLTVAPTTTPATH
AVTTKIKTTSVPPKTSQPIYSSTSSAVTTGLPTTEPLPSTVATESIPTTTLPWLKEKSQN
SNECFRYAYGTFSGNITIVEPKHPLRNRLKSRIVDVSAARVTNTDINFLVKCLGSIPTSA
CTIVSDPSCTKVRNIMCNDVPPSTECEVHLRRRFLEPGTYCVNITLESSKSMALASTTIT
ISKSQDTPVPETPNTARVVLTSSAVLVAVFAMIAYVVYRRHKLYRPIRRSLVEDACARSD
TRGPMVRLREALFPSSEESRHLLHERHPL
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcctgcaggatttgtgtctcctggctttttacgcctgctgcgtttatcaagct
gatgcgcgacagacatatcgggatgttttcccccacaagcactcattaacaggaaagttt
ccatttccaatcccaccaatcccgggatgggagcctgataccaatccatgggatgattac
ctctacccaccgctaaactcaaagcccagagagctaatgcatcacagaggtaaaccgaaa
gtccgtctaaccagcgacagcccagctattaatggctcatgcataacctttactgccaag
ctggagtatcctccgtgtcagagggaagatgccaatggggaccttgtctgggatgagcac
tgcgaggatggtacggagctggaggcctcagctaacggacagcttcgctcaggatatgtg
tataactggacttcttggttggatgattacggatttggaaagtgcacagacaaggcaaaa
tgcaatgtgttccctgatgggaagccttttccacagagcaatgactggaggcgcaagagc
tacgtctatgtttggcacacaatgggccagtactatgaaacatgtgatggatcatcttcc
agtgtgaccattaacaccactaatatcccactgggggcagaggtcatggaggttatggtg
tataggaagcgtgagcgcaggaagtacagccccctcactaatgacaacactgtattctta
atcacagataagatcccactggcagttgacatctcccagaagtctgctgtcaacaagtct
gccaatgtttttatccgtggagaggagatggtcttcaaagtccggctccatgatcccagc
ggctacctaaagacggccgcatcagtggactacatctgggactttaaagatggcaaccag
ctcgtgacacaccgcgaggtgacgacgcacacttacagcacactggggataatgaatgtg
aagctggtagtggaggctgcgtttcctgtggagtgtccacccgcttctgccactccgact
ccaaggcgccccacatcgccacctcttacagtggctcctactactactccagctacccac
gccgtgacaaccaagatcaagacaacgtctgtgccacccaagaccagtcagcccatttac
tcgtccacttcctctgcagtgacaaccgggttaccaacaacagagccccttccctccact
gtagcgactgagtccatccccaccaccaccctgccttggctcaaagaaaagagtcagaac
agcaacgaatgtttccgttacgcctatgggacattctcaggcaacatcactatagttgag
ccaaagcaccctctaagaaatcggctaaagagtcgcattgtggacgtttcggctgccagg
gtgaccaacaccgacattaacttcctggtaaaatgtcttggcagtatccccacttccgcc
tgcaccattgtgtcagaccccagctgcactaaagtacgcaacattatgtgcaacgatgtt
ccaccatcaacagagtgtgaggtgcatctgaggcgaaggtttctggaacccggcacctac
tgtgtgaacatcaccctggagagctcaaagagcatggcacttgctagcaccaccatcacc
atcagcaagtctcaggacacacctgtgcctgaaactccaaacactgcccgggtagttctc
acttctagtgctgtgctggtggcagtctttgcgatgattgcctacgtggtttaccggcgc
cacaagctttaccggcccatccgaaggtcacttgttgaggatgcctgtgcccgttctgat
acaagaggtccaatggttcgcctgagggaggcgctcttcccctccagtgaggagagccgc
cacctgctgcatgaaagacaccctttgtag
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