Cyprinodon variegatus (sheepshead minnow): 107084421
Help
Entry
107084421 CDS
T06110
Name
(RefSeq) iroquois-class homeodomain protein irx-1-like isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107084421
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
107084421
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
107084421
NCBI-ProteinID:
XP_015229730
Ensembl:
ENSCVAG00000008606
UniProt:
A0A3Q2DXN0
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MSFPQLGYPQYLSASQAVYGSDRPGVLTPSSRGGSSEIGGSPSATAAAAVTSVLGMYANP
YAHNYSAFLPYTSADLALFSQMGSQYELKDSPGVHPATFAAHTSPAFYPYGQFQYGDPAR
PKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK
VTWGNRSKEDGEDGNLFGSGDEAEKNEDEEEIDLESIDIDKIDENDGDQSNEDDDDKSTE
GSREHRGGVGAPGDLDSLEKRRAFALQAHEAFEKSKSAMSVHTGGKENSDGNNNTRVVSP
DRPGSFPLPSNNKPKIWSLAETATSPDSSSQKPSSPCAPGSNTSHPSAPHHQIQTHPAFL
PSHGLYTCQIGKFHNWTNGAFLGQNSLLNVRSFLGVNQHHHHHPSNHPLSAQQQQQQQQP
ASVVVSPVAASAPSNDSKSPADTHSPKHIEHERSDSPPTQTLKSSFRPILDRSSMPSSAR
SPQDATQRVLTALSSA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccgcagttaggctatccgcagtatctaagtgcctcccaggcggtgtacggg
agcgacagaccgggagtgcttacgccatcatcacggggaggaagctcggaaattggtgga
agtccgtcagctacggcggctgcggccgtcacatcggtcctgggcatgtacgcaaacccg
tacgcgcacaactacagcgcgttcctgccgtacaccagcgcagacctggctctcttctca
caaatggggtcgcagtatgagcttaaggacagccctggcgtgcatccggccaccttcgca
gcacacacgtccccagccttttacccatacggccagttccagtatggagaccctgccaga
cccaagaacgccacccgggagagcaccagcacactgaaagcctggctcaatgagcacagg
aagaacccatacccaactaaaggggagaagatcatgctggccatcatcaccaagatgaca
ctgacccaggtttccacctggtttgccaatgctaggaggaggttaaagaaggagaacaag
gtgacctgggggaacaggagcaaggaggatggggaagacgggaacctgtttggtagtgga
gacgaggccgagaaaaacgaagacgaggaggagatcgatttggagagcatagatatagac
aagatagacgagaacgatggggatcaaagtaatgaggacgatgacgataagtccacggag
gggagcagggagcacaggggaggcgttggcgcacctggagacttggacagcttggaaaaa
agacgggccttcgccctgcaggcccacgaggcctttgagaaatctaagagtgcaatgtca
gttcacactgggggcaaggagaactcggacggcaataacaacacaagggttgtgtccccc
gacagacctgggagtttccccctcccctctaacaataaacccaaaatctggtctctggcg
gagaccgccaccagccccgacagttcatcccagaaaccttcctccccatgtgcaccaggg
agcaacacttctcacccatcagcgcctcatcaccagatccaaacccacccggccttcctc
ccaagtcatggactgtacacatgccagattggaaagttccacaattggacaaacggggcc
ttcctgggccagaactccctgctgaatgtcagatctttcctgggagtaaaccaacaccat
caccaccaccccagcaaccatcctctgtcggcccagcaacagcagcaacaacaacagcct
gcatcagtagtagtgtcaccggttgcagcttcagcgcccagcaacgacagcaagtcccca
gcagacacccacagtcccaaacacatagagcacgaaagatctgattcacctccaacacag
accctgaagtcctcatttcgtcctattcttgacagatcctcaatgccttccagcgccagg
agtccccaagacgccacgcaacgtgtcctcaccgctctctcctcggcttga
DBGET
integrated database retrieval system
