Cyprinodon variegatus (sheepshead minnow): 107084452
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Entry
107084452 CDS
T06110
Symbol
nipbl
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
107084452 (nipbl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107084452 (nipbl)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
107084452 (nipbl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
Cnd1
HEAT
Cnd3
UBM
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
107084452
NCBI-ProteinID:
XP_015229802
Ensembl:
ENSCVAG00000006776
LinkDB
All DBs
Position
Unknown
AA seq
2543 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTAKSLLFNSKIAEEVNRLLGCRDES
LASQLAHGLNQVSTEHIELKDNLGSDEPEGDAPLLLQTMLARNPGIFREKNVMQQPMVQP
FKITQNSMHSPAQSANFQPAAISPNPSSRFVGPQTGSSSRYSPVPSPYTPQSPAPGYIQQ
FPHQQPPSYNQLQQIQASVTSPMVPGGIRNIQEGKVSGQLPNAPNHHSDRHGTDDYMNIV
QRLGSEEGDLSMRNPSFQMRSPQSGCSPASSEGTPKQGSRPQLILQSPPPYASSPREGGH
DQKQHLHQRKKAPTVKEEKDMYDIVSSPNKDSTKLTLKLSRVKSNESDPPGDVGSGMDQN
SDNIEAEMGFQHVPVLQPNLAARLQPQQVQQQMGGAGGLQPPSSPYDEAELDALAEIERI
EREAASEKCSKEVQDKDKPLKKRKQDSFPLEPGAGGPGAPTGAPGSGSTGGANAGKLTPQ
EATAAGNGASRPPLMVSIDLQQAGRADGQLDPCLAAPIPALEAQRWPEEPASGQAAVEGS
DTALQLKPDGRPEVIKNRVDKHDSRRDGRESSKHRHHDKSSDRRGELPKPSNRGEHGRDR
ESDRDRRHRSETGCRDRRSPESRSRSDRDRSGFQASSAGEPGRSSSRQDGSKAASSSTGA
KIPDSFPAQLLGGHTGALKNFQIPKINRDRENSESTESQMWGQPKVKLERLGLVKDFEKR
PKPVVVLKKLSVDQIQRIIRHSKSKNRFSGKSGKSGMDPEVLKELPPELLEEIESTMPMY
ERVKMNKRKRSTVNEKPKYAEVSSDEDYDANGESARKRHKRDKDRSWDIEERERRGSGEH
RKSGHREGRRGSGSRYRDSSEEDSPPPSMSEIARKMKMKEKQKKRKAYEPKLTQEELMDS
STFKRFLASIDNILENLEDVDFTTMAADDDEIPQELLLGKHQLNELGSESAKIKAMGITS
KIPSDKLVKLLNILEKNIQDGSKLSTLLNHDHDAENEERLWRDLIMERVTKSADACLTAL
NIMTSTHMPKAVYIEDVIERVLQYTKFHLQNTLYPQYDPVYRVDPHGGGLLSSKAKRAKC
STHKQRVIVMLYNKVCDIVSNISELLEIQLLTDTTILQVSSMGITPFFVENVSELQLCAI
KLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDQDGEPMYIQMVTALVL
CLIQCVVHLPNDKDVFEEYDKVDQDVLITNSYETAMRTAQNFLSVFLKKCGSKQGEEDYR
PLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLDYLGTVAAR
LRKDAVTSKMDQRSIDRILQESQGTDETQQLQKALLDYLEENAETDPSLVFARKFYIAQW
FRDATTEAEKSMRNQNPKDEDSSDGPQHAKEMETTGEIMQRAEKRKKFLRNIIKTIPAHF
TTLKMNSDTVDYEDSCLIVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTKAMKCLSE
VVAVDPSILARSDMQRGVHGRLMDNSTSVREAAVELLGKFVLSRPQLTEQYYDMLIERIL
DTGISVRKRVIKILRDICLEQPTFSKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPT
PAHDKDTMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDASYKPAKKACVQLVDNL
VEHILKYEESLAENKGVNSTRLVACITTLYLFSKIRAQLMVKHAMTMQPYLTTKCNTAND
FMVICNVAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVT
HNYKFVWSCFNKFYGALNKFKIQHQEDPNSTTLVANKPFLLRSLFTVGALGRHFDFDQEE
FKGPNKVIIKEKVLELLLYFTKHDDEVVKTKAIIGLGFLVIMHPSQMFVPEVKSLYNGIL
ADSASSINLKIQVLKNLQTYLQEEDSRMQEADREWKKLSKQEDLKEMGDISSGMSSSIMQ
LYLKQVLEAFFHTESSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPSMRNKADQ
QLVEIDKKYTGFIHMKAVAGMKMSYSLQQAINLSRKSIVRGFRQDETHSALCSHLYTMIR
GNRQHRRAFLISLLNLFDDSAKTEVNMLLFIADNLACFPYQSQEEPLFIMHHIDITLSVS
GSNLLQTFKELLLKEPRRKEKKVKVWKNTSDGEDEEKMNCDSSRSDEEENCNSDGNENED
NNDDVVHRPKKTRKPVGNEDGSDSESDLEDLDVEDVDKVMRLLPDNPSGLLDFANAVQGI
LLLLVLKQHLKNLYGFSDGKIQKYSPTESAKVYDKAVNRKNNVTFSPRQTLDFIFNNMGN
ATLTEDVKRRIVKQYLDFKVLMEHLDPDEEDEEGEASASANIRNKAINALLGGSGLLSGP
SPRNQAGPETDDDDSDSDDRTPGSSRRSRRAGDSSDPGRMSETVEAMDVIALCCPKYKDR
PQIARVTQKTANGYTIHWMAGSYSGPWAEAKKRDGRKLVPWVDTIKESDIIYKKIALTSN
HKLSNKVVQTLRSLYAAREGGAS
NT seq
7632 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgccccatgttcccatcaccactcttgctgggatcgctagcctcaca
gacttgttgaaccagctgccgcttccttctcctctacccgccaccaccgctaagagcctg
ttgttcaattcgaagatcgcagaggaagttaaccgtctactggggtgtcgagatgagagt
ctggcttcacagctagcccatggccttaaccaggtctccacagagcacatagaactgaag
gataacctggggagcgatgaaccagaaggagatgcaccactgttgctgcagaccatgctg
gccaggaaccctggcattttcagggagaaaaatgttatgcagcaaccaatggtacaacct
tttaagatcacccaaaactccatgcatagccctgcacagtctgcaaacttccagccggcg
gctatctcccccaatccgtcaagccggtttgttgggccacagactggttccagtagtcgg
tacagtcccgtacccagcccttacactcctcagagccctgcaccagggtacatacaacag
ttcccccatcaacaaccccccagctacaaccaactccaacagatacaagcgtcagtaacg
agtcccatggtgccaggtgggatacgaaatatccaagaaggcaaagtatcagggcagcta
cccaatgctcccaatcaccattcagacagacatggtacagacgactacatgaacattgtc
cagcggctgggaagtgaggagggtgatttgagcatgaggaatccttccttccagatgagg
tctccacagtcaggctgctctccagcatcgagtgaaggaacccccaaacagggttcccgt
cctcaattgattctccagtcgccgcctccctatgcttcctcaccaagggaaggtggacat
gaccagaagcagcatctccatcaaagaaagaaagctcctacagtaaaagaggagaaagat
atgtatgacatagttagctctccaaacaaggactccacgaagctcaccctcaagctctcc
agggttaaatctaatgaatccgatccaccaggtgacgttgggtcgggcatggatcagaac
tcggacaatattgaggctgagatgggctttcagcatgttcctgtcctccagccaaattta
gccgcccggctgcagccgcagcaggtccagcaacaaatgggtggagctggcggtcttcag
cccccaagttcaccctatgatgaggcggagctcgatgctctcgctgaaattgaaaggatt
gaacgtgaggcagcaagcgaaaagtgttctaaagaagttcaagacaaagacaagccactt
aagaagagaaaacaggactcttttcctcttgagcctggtgcaggaggaccaggggccccg
actggtgccccagggagtggatcaacaggaggggccaatgcaggcaaactgaccccacaa
gaggctactgcagctggaaatggtgccagccgtccccccctcatggtgagcatcgacctc
cagcaggcagggcgagctgacggccagctcgacccctgtctggccgctcctattcctgcc
cttgaggcccaacgctggcctgaagaaccagcaagcgggcaagcagcagtggaaggttct
gacacagctttgcagttgaaaccagatggacgaccggaggtcatcaaaaacagggttgat
aagcacgacagtaggagagacggtcgggagtcatccaagcaccgacaccatgacaagtcg
tcggatagacgcggagaattaccaaagccttcaaatcgaggggaacatggacgagacagg
gaatccgacagggatagaagacatcgaagcgagacgggttgcagggacagacggtcccct
gagtcccgctccaggagcgatcgagatagatctggcttccaggcctcctctgccggagag
cccggtcggagcagcagtagacaagatggatccaaagcggcctcttcttccactggtgct
aaaatcccagattctttccctgctcagctccttggagggcataccggagcactgaagaac
ttccagatccctaagatcaatcgggaccgtgagaacagtgagtcaactgaaagtcagatg
tggggccagcctaaggtcaaactagagagactaggtttggtgaaggactttgagaagcga
cccaagcctgttgtggtgttaaaaaagctctcggtggaccagattcagagaatcattcgg
cacagcaagtcaaagaacaggttctctggaaagtctggaaaaagtggtatggatccagag
gttttaaaggagctccccccggagttactagaagaaattgagtcgaccatgccaatgtat
gagagggtaaaaatgaacaagaggaaacgaagtaccgttaatgagaagcctaaatatgct
gaagtcagctcagatgaagactatgatgcaaacggagagtcggcaaggaagcgtcacaag
cgggacaaagacagatcatgggacattgaagaaagggaacgacgaggttctggggagcac
cggaaaagcgggcatcgagaaggtcggcgaggttccggcagccgctaccgtgactcctct
gaagaagattcacctccacccagcatgagtgaaatcgccagaaaaatgaagatgaaagag
aagcaaaagaaacgaaaagcttacgaacctaagctgacccaagaagagctaatggactca
tccacgttcaaaagattcttggcaagcatagacaacatactagaaaacctggaggacgtg
gatttcaccaccatggcagcagatgatgatgagatacctcaggaactgttgcttggtaaa
caccagctgaatgagcttggcagcgagtctgccaaaattaaggccatgggcatcaccagc
aagatcccatcagacaaattggtgaaactcctgaacatccttgaaaagaatatccaggat
ggatccaagctctctaccttgttaaatcatgaccatgatgctgaaaatgaggaaaggctc
tggagggacttgataatggagagagttacaaagtctgccgatgcctgtttgacggctctt
aacatcatgacctcgacacacatgccaaaggctgtgtacattgaggatgtgattgagcga
gttctacagtacaccaagtttcaccttcagaacactctttatccacagtatgatcctgtc
tacagagtggatccgcatggaggtggcttgttgagctccaaggcaaagcgtgccaaatgc
tcgacacacaaacaacgtgtaattgtcatgttgtacaacaaggtgtgtgacatagtcagc
aacatttcagagctcctagaaatccagcttcttacagatacaacgatccttcaggtttct
tctatggggataactccgttctttgtggagaatgtcagtgagctgcagttgtgtgccatt
aagctcgtcaccgcggttttttcccgctatgagaagcaccgacagcttatcttggaggag
atctttacgtctttggccaggttacccaccagcaagcgctctcttaggaatttcaggctg
aacagctctgaccaggatggagaaccgatgtacattcagatggtgacagctctggtgctt
tgcctgatccagtgcgtggtccatctccctaatgacaaggatgtgtttgaagagtacgac
aaggtggatcaggatgttctaataaccaattcatatgagacggcaatgagaacggcacag
aacttcctgtctgtcttcctcaaaaagtgtggcagcaagcaaggagaagaagattaccgc
ccattatttgaaaactttgtccaggatctgctatcaactgtaaacaaaccggagtggcct
gcagcagagctgctgctcagtcttcttggaagactattggttcaccagtttagtaataaa
cagacagaaatggctctcagagtggcttctctggactacctgggcacagtggctgccaga
ctcaggaaggatgccgtcactagcaagatggaccagaggtctattgatcgcatcctacaa
gagtctcagggcaccgatgaaacgcagcagctgcagaaagctttactggactatctggaa
gagaacgctgagacggatccttctctggtgtttgctagaaagttttacattgcccagtgg
ttccgtgacgctacaacagaggctgagaaatctatgaggaaccagaatccaaaggatgag
gactcatcagatggaccccaacatgcaaaagagatggaaacaactggtgaaattatgcag
cgtgcagaaaaacgcaagaagtttctgcgcaacatcattaagacgatacctgcccatttc
accacactgaaaatgaattcagacactgtggactatgaagactcctgtctgattgtgcgt
tatttggcctccatgaggccgtttgcccagagctttgatatttatttaacacagattttg
cgcgttcttggggaaagtgccattgctgtaaggactaaagccatgaagtgtttgtcagag
gtcgtggctgtggaccccagcattctggccaggtctgacatgcagcgaggtgtccatggt
cgtttgatggataactccaccagtgtacgggaagcagctgtagagctgctgggaaagttt
gtgcttagcagaccccaactcactgagcagtactatgacatgctcattgaaaggatattg
gacactggaatcagtgtaagaaagcgagtcattaagattctcagagacatctgtctggag
caaccaaccttcagtaagatcactgagatgtgcgtgaagatgatccgcagggtcaatgat
gaggaaggcatcaagaaactggtgaatgagacatttcagaagttgtggtttactccaact
cctgcgcatgacaaggacaccatgacccgaaagattctcaacatcactgatgttgtggct
gcgtgtcgcgacactggttatgactggttcgaacagcttttgcaaaatctcctaaaatca
gaagaggacgcttcatataagccagctaaaaaggcctgtgttcagctagttgacaacctg
gtggagcacatcctcaaatatgaagagtctcttgcagaaaacaaaggagtaaactccaca
cggctcgtggcatgcatcaccaccttatacttgttcagcaagattagagcacagctcatg
gtcaaacatgccatgaccatgcaaccctatctgaccacaaagtgtaatactgccaatgac
ttcatggttatctgcaacgtggcgaagatcttggagctggtggtgcccttaatggagcac
ccaagtgaaactttcctcgccaccattgaagaagacctgatgaaactcatcattaaatac
ggcatgacggtggtccagcactgtgtgagctgccttggagctgtcgtaaataaagttacg
cacaactacaagtttgtgtggtcgtgctttaacaaattctacggtgctcttaacaaattc
aagattcagcatcaagaggatcccaacagcaccacattagtagcaaacaagccttttctg
ctgcgatcgctcttcactgtgggtgctttgggtcgacattttgattttgatcaggaagag
tttaaaggccccaacaaggttattatcaaggaaaaggtcctggagctcctgctgtacttc
accaagcatgatgatgaggtggtcaagaccaaagccatcattggcttaggtttccttgtc
atcatgcatccaagccagatgtttgtgcctgaggtgaaatccttgtacaatggtatcctg
gctgacagcgcctcttccatcaatctcaaaatccaggttctcaaaaacctccagacgtac
ctgcaagaagaggactcacgaatgcaggaagcagaccgagaatggaagaaactctccaaa
caggaggatctgaaagagatgggagacatatcatcagggatgagcagctccattatgcag
ctgtacttaaaacaggtgttggaggctttctttcacacagagtccagtgtgcggcacttt
gctctaaacgtcatcgctcttacgctcaaccagggtctcattcatcctgtacagtgtgta
ccctacctcattgcaatgggaacagacccagagcctagcatgagaaacaaagctgaccag
cagctggtggagatcgacaagaaatacacgggatttatccatatgaaggcggtcgccggg
atgaagatgtcatacagtctgcagcaggccatcaatttatctcgtaaatccattgttcga
ggcttcagacaggatgagacccactctgctctctgctcccacctctatacgatgatccgg
gggaaccggcagcaccggagagctttcctcatctcattactgaacctctttgatgatagc
gctaagactgaagtaaatatgctgctgttcatcgcagacaacttggcttgtttcccatac
cagagccaagaggagcctctcttcatcatgcaccacatagacatcacactgtctgtttca
ggcagcaacttgttgcaaacctttaaagagcttctactaaaggagccgagacgtaaggaa
aagaaagtaaaggtgtggaaaaacacatccgacggtgaggatgaggagaagatgaactgc
gattcttccagaagcgacgaagaggaaaactgcaacagtgacggtaacgaaaacgaagac
aacaacgacgatgttgtacatcggccaaagaagacgagaaaacctgtgggaaacgaagac
ggctcagattctgaatctgatttggaggatttggatgtggaggatgtggacaaagtaatg
cggctcctgccagataatcccagcggcctgttggactttgctaatgcggttcagggtatc
ctgcttctgctggtgctcaagcagcatttgaagaacctttatgggttttctgacggtaaa
attcagaagtactctccgacagagtcggcaaaggtgtacgataaagcagtgaacaggaaa
aacaacgttaccttcagcccaagacaaaccctggacttcatcttcaacaacatgggtaat
gccacgctgacggaggacgtgaaacggcggatagtcaaacagtacctggatttcaaagtt
ctgatggaacacctggatccagatgaagaggatgaggaaggagaggcctctgctagcgcc
aacatcagaaacaaagccataaacgccctactgggaggctctgggctgttatcgggaccc
agtccgcgcaatcaggcaggaccggagacggatgacgacgatagtgatagcgatgatcgg
accccagggtcctctcgaaggtcaaggcgagcaggcgactcctcagatccaggccgaatg
agcgaaacggtggaagctatggacgtgatcgccctctgttgccccaaatacaaggaccga
cctcagattgctcgagtcacccaaaagactgccaatggatacacaatccactggatggca
ggctcttactcgggaccctgggcagaggccaagaaaagggacggccgtaaactggtgcct
tgggtggacactattaaggagtcggacatcatttacaagaagattgccttgaccagcaac
cacaaactgagcaacaaagttgtacagactttacgctcactatatgcagcacgggaagga
ggggctagctaa
DBGET
integrated database retrieval system
