Cyprinodon variegatus (sheepshead minnow): 107084458
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Entry
107084458 CDS
T06110
Symbol
fem1c
Name
(RefSeq) protein fem-1 homolog C
KO
K25805
protein fem-1 homolog A/C
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107084458 (fem1c)
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
107084458 (fem1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ank_KRIT1
ANK_LRRK2
TPR_12
TPR_NPHP3
TPR_2
TPR_10
Motif
Other DBs
NCBI-GeneID:
107084458
NCBI-ProteinID:
XP_015229822
Ensembl:
ENSCVAG00000006014
UniProt:
A0A3Q2DSU8
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MDLKTAVYNAARDGKLRLLQKLLENKDGHEVSKLMGEKTNGATPLLMAARYGHLDLVEYL
LECCCAPVEVGGSVNFDGETIEGAPPLWAASAAGHLKVVQSLLGHGASVNSTTLTNSTPL
RAACFDGHLDIVRYLVEHKADLEVANRHGHTCLMISCYKGHKEIAQYLLEKGADVNRKSV
KGNTALHDCAESGSLEIMRMLLQYGATMERDGYSMTPLLSASVTGHTNIVDYLTTHQQTS
HTERIDALELLGATFVDKKRDLLGALKYWKRAMDLRYTDSNNVVQKPEPKQLIMAYDYAK
EVTNGEELDGLISDPDEMRMQALLIRERILGPQHPDTSYYIRYRGAVYADSGNFERCINL
WKYALEMQQSNLDPLSPMTTSSLLSFAELFSFMLQDRAKGLLGTSVSFEDLMGILTKSVL
EIERAVKQLGPIPPDPAQLSKALSIILHLICLLEKVPCSPDQDHSKKETIYRFLKLQPCG
KNGFTPLHLAVDRNTTCVGRYPVCKFPSLTVASILLECGADVNSRDEDDNSPLHIAASNG
HPDIMNLLISNGTHFDSTNAFQQTACDLLDEKELARNVIQPINHTTLQCLAARAIIKHSL
GYRGNIPEKLEAFVLLHR
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaagactgcggtttataacgccgccagggacggtaagctccgcttgcttcag
aaactgttggagaacaaagatggacacgaagtgagcaagctgatgggggagaagacgaac
ggagccactccgctgctgatggccgctcggtacggccacctggacctggtggagtacctg
ctggagtgctgctgtgctccggtggaggtagggggctcggtgaactttgatggggagacg
atagagggggcgccccctctgtgggcagcttcggcagccggtcacctaaaggtggtccag
tccctgctgggacacggagcctctgtgaacagcacgaccctcactaactccacgcccctg
agggcagcctgctttgacgggcacctggacatcgtcaggtacttggtggagcacaaagct
gacctggaggtggcgaacagacatggccacacgtgtctgatgatctcctgttacaagggc
cacaaggagatagcgcagtacctgctggagaaaggggcggatgtcaacaggaaaagcgtc
aaaggcaacaccgcgctccatgactgtgcagagtcaggtagcctggagatcatgcgaatg
ttgctgcagtacggtgccaccatggagcgggatggctacagcatgactcccctcctctct
gccagcgtcaccggtcacactaacatcgtagactacctgacgacgcaccagcagacaagt
cacacggagcgcatcgatgcactggagcttttgggagcaacatttgttgacaagaagagg
gatctgcttggagctttaaagtactggaagagagccatggacctcagatacacggacagc
aacaacgttgttcaaaaaccagaacccaagcagctgatcatggcctatgattatgccaag
gaggtcactaatggggaggagctggatgggttgatatccgacccggatgagatgcgcatg
caggctctgctcatccgagagagaatcctcggaccacagcatccagacacctcctactac
atccgataccgaggggccgtctacgcagactctggaaactttgagcgctgcatcaacctg
tggaagtacgcactggaaatgcagcagagcaacctggaccccctgagccccatgaccacc
tccagcctgctgtcgttcgcagagctcttctccttcatgctgcaggacagggccaaaggg
ctcttagggacatcggtgtccttcgaggacctgatggggatattgaccaagagcgtgtta
gagattgagcgagcggtcaaacagctcgggccgattcctcctgacccggctcagctcagt
aaggccctgtctataatcctgcacctcatttgtcttctggagaaggtgccttgttctcct
gaccaggatcattcaaagaaggaaaccatctataggttcctgaaactccagccgtgcgga
aagaacggcttcacccctttgcacctggcggtcgaccgcaacaccacctgcgtgggccgc
tatcctgtttgcaagtttccctccctgacagtggcgtccatcctcctggagtgtggagcg
gatgtcaacagccgggacgaagacgacaacagcccgctccacatagctgcctctaacggt
caccctgacatcatgaacctgctcatttccaatgggactcacttcgacagcaccaacgcc
ttccaacaaaccgcctgcgacctcctggacgagaaggagctggccaggaacgttattcaa
cccatcaaccacaccacgctgcagtgcctcgctgccagagccatcatcaagcacagcctg
ggctatcggggaaacatccccgagaagttggaggccttcgttttgctccacagataa
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