Cyprinodon variegatus (sheepshead minnow): 107084460
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Entry
107084460 CDS
T06110
Symbol
ddx21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvg03009
]
107084460 (ddx21)
03036 Chromosome and associated proteins [BR:
cvg03036
]
107084460 (ddx21)
Enzymes [BR:
cvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107084460 (ddx21)
Ribosome biogenesis [BR:
cvg03009
]
Eukaryotic type
Pre-60S particles
Helicases
107084460 (ddx21)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
107084460 (ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
107084460
NCBI-ProteinID:
XP_015229829
Ensembl:
ENSCVAG00000018333
UniProt:
A0A3Q2G1C4
LinkDB
All DBs
Position
Unknown
AA seq
753 aa
AA seq
DB search
MPSKIKFESLEEATEKAMDTVAEVETFKVENKTKEGKKLKKQKQQQSEEQEEDPDCDPPA
PKKKKKKEKLAADQVNGHIDEAADVNGNSNDVESPKQKTKKKKESSEKNKKQKKAITEAA
TNGHSTPSTPAQTPTQTPSQSSDDSASDSENELTPEQREGAFSNFRISQATIDKLKARGV
SYLFDIQVKSFNPVYDGEDVIAQARTGTGKTFSFAIPLIEKLQNGVPENTRGRPPKVLVL
TPTRELAIQVTRDFKDISKRLSITCFYGGSPYNPQIDAIRNGIDILVGTPGRIKDHLQNN
KLNLSKLKHVVLDEVDQMLDMGFAEQVEEILSSSYKKDSDTNPQTLLFSATCPPWVYDVA
KKYMRPGCKHIDLIGKKTQKAATTVEHLAIACHWSQRAAVIGDVVQVYSGSHGRTIVFCE
TKKEANELAMNASIKQSSQSLHGDIPQKQRETTLKGFRNGAFEVLVATNVAARGLDIPEV
DLVVQCSPPKDVESYIHRSGRTGRAGRTGVCICFYQRKEEDQLRYVENKAGITFRRVGVP
TANDIIKSSSKDAVRFLDSVPATAIEYFRESAEKLIEEKGAVDALAAALAHISGATSLEQ
RSLLNSDAGYATMQMLCSQEMHNLGYAWRTIKEQLGEDFENHIYRMTFLKGKMGVCFDVP
ADKVKEIQDNWTDGRRWQLTLATELPELEEKQFSNRGERNFGGGNRGGFRGGRGRGFSGN
GGRNNSFRNGAGGGGYSNSRGGHKRTFSQAFEY
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgccatcaaaaatcaagtttgaaagtttggaagaagcaacagagaaagcaatggacact
gtcgcggaggttgaaaccttcaaggtggaaaataagaccaaggaaggtaagaaactgaag
aagcagaagcagcagcagtcagaggagcaggaggaggatccagactgtgatcctcctgca
ccaaagaagaagaagaaaaaggaaaagctggcagcggaccaagttaacggccacatcgat
gaagctgctgatgtaaacggaaacagtaatgacgttgagtcaccaaaacagaaaaccaaa
aagaaaaaggaatcatcagagaaaaacaagaagcaaaagaaagcaatcactgaggcagca
accaatggacattccacaccaagcacaccagcccagacccctacacagaccccatctcag
tcaagtgatgactcagccagtgacagcgaaaatgagctgacaccagagcagagagaagga
gctttctctaatttcagaatatctcaagccaccatagataaactgaaagctcggggagtc
tcttacttgtttgatatccaggtaaagtcatttaatcctgtgtatgatggagaggatgtt
attgctcaagcccggacaggaacaggaaaaacgttctcctttgccataccgctgatagaa
aagctccagaatggtgtaccagaaaataccagagggcgccctcctaaggttttagtcttg
actcctaccagagagttggccatccaagtcaccagagacttcaaagacatttccaagaga
ctgtctattacgtgtttctatggaggaagcccatacaatccacagattgatgccattcgt
aatggaattgatattttggtgggaacgcctggtcgcatcaaagatcaccttcagaacaac
aaactcaacctctccaaactgaaacatgttgttctggatgaagtggaccaaatgttggac
atggggtttgcagaacaagtcgaagagatattgagttcatcgtataagaaagacagcgac
accaacccacagacccttctgttctctgctacttgccctccatgggtgtatgatgtggcc
aagaaatacatgaggccaggctgcaagcacattgacttgattggcaagaaaacacaaaag
gctgcaacaactgttgagcatttggccatagcgtgtcactggagtcaacgcgctgcagtg
attggagatgttgttcaggtgtacagtggtagccatggcagaacaatcgtcttctgtgag
accaagaaggaggctaatgaactggccatgaatgcatccatcaaacagagttcccagtcc
ctccacggtgatattccacagaaacaaagagagacgactcttaagggtttcagaaatggt
gcatttgaggttctcgttgccacaaacgttgcagcccgtggattagacatcccagaggtc
gacttggtggtccagtgttctccacccaaggatgtagaatcgtacatccatcgttcaggg
cgaacgggacgagcaggcaggactggagtctgcatctgcttctaccagaggaaggaagag
gaccagctgcgctatgtagagaacaaagcaggcatcactttcaggcgagttggtgttccg
actgccaatgatatcatcaaatcatcgagcaaagatgctgtcaggtttttggattctgtt
ccagcaactgcaattgaatattttcgggaatcagcagagaagctcatagaagagaaggga
gcagtagatgctctagccgctgctctggcccatatttctggagccacaagtctagagcag
aggtctctactgaactctgatgctggttacgcaacaatgcagatgctgtgttctcaggaa
atgcataatctcggttatgcctggagaaccattaaagaacagctgggagaggactttgaa
aaccacatttacagaatgaccttcctcaaaggcaaaatgggagtttgctttgatgtccca
gctgataaagtcaaagaaattcaggataattggacagacggtcgccgctggcagctgact
ttagccacagagctcccagagcttgaggagaagcagttctccaaccgcggagaaagaaac
tttggtggtgggaacagaggagggtttagaggtgggagggggcgcggcttcagtggaaat
ggtgggcgtaacaacagctttcgaaacggtgccggcggaggaggctacagcaacagtaga
ggtggacacaaacggacctttagtcaagcgttcgagtactga
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integrated database retrieval system
