Cyprinodon variegatus (sheepshead minnow): 107084461
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Entry
107084461 CDS
T06110
Symbol
trim36
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM36 isoform X1
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107084461 (trim36)
04121 Ubiquitin system [BR:
cvg04121
]
107084461 (trim36)
Enzymes [BR:
cvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107084461 (trim36)
Membrane trafficking [BR:
cvg04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
107084461 (trim36)
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107084461 (trim36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
COS
zf-RING_UBOX
ANCHR-like_BBOX
zf-C3HC4
Pur_ac_phosph_N
zf-C3HC4_4
SPRY
zf-C3HC4_2
zf-C3HC4_3
RING_XB3-XBAT31
fn3
zf-RING_5
zf-RING_2
DUF1826
Motif
Other DBs
NCBI-GeneID:
107084461
NCBI-ProteinID:
XP_015229824
Ensembl:
ENSCVAG00000005963
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MSDSEDMTEFASIVERIERGEVPIKNIERELICPICKELFTHPLILPCQHSVCHKCVKEL
LMLNYEDSFDAGSESSVPGSPRSRVPSPSMERLDRLVRSATGRRSFGSRGRRGLRVFSSY
GPRKRSGNTGLQSEINPALLSSPVPQKRSISSPGWRRGSVTPRVTAIPCPGCQHDIDLGE
RGISMLFRNFTLESIVERYRQAARAAVAIMCNICKPPNQQEATKSCMDCKASYCNECFKL
HHPWGTPKAQHEYVGPTTNFRPKVLMCPEHEMEKVNMYCEVCRRPVCHLCKLGGSHANHK
VTSMSSAYKILKEKLAKSIHYLISKEDQVRTQITELDRLINQTEENGQVAERQANEHFER
LFETLQERKSEMLRSIEQSRNRRIDQLKGQVEEYRGMLENSGLVGYAQEVLKETDQSCFV
QTAKQLHVRIQKATESLKTFHPSADPCFDEFVLDTSKEETLLKEMCFGGVPDPPLIDFSQ
SRVYNEASICWRLPDDHLPTDHHVLEYRKLGGPSQPPSHEDTEDGCVWRATDRVYGSSAV
VQDLQPDSRYAFRVRSCRNSMFSPYSPEVSFHTPPAPVFSFLFSDKCGFSTERLILNNRR
DTVESVAGMAFLLAAERVQMGSYLGLDYIIGDTGISQGRHYWAFKVEPYSYMVKVGVASD
TKLIEWFHNPRDTSSPRYDHDSGHDSGSEDACYELSQPFTLITLGMGKLFIPKASSSSSV
SNANVSSGDPGNRVLPMPQRLGICLDYDAHRVYFYDADTMRCLFERQVDCSGTMFPAFGL
MGSGKVQLEEFITAKKLTF
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactccgaggatatgacagagttcgccagcatcgtggagcgcatcgagcgggga
gaggtcccaatcaagaacattgagcgggagctgatatgtcccatctgcaaggagctcttc
acccacccgcttatcctgccctgccagcacagtgtctgccacaagtgcgtgaaagagctg
ctgatgctgaactatgaggactcgttcgacgccggctctgagagctctgtgccaggaagc
cccaggtccagggtgccttctccctccatggagaggctggacaggctggttagatcagcc
acagggcgaaggtcgtttggaagtcgaggtagacgtgggctccgtgttttcagtagctat
ggtccccggaagcgaagtggaaatactggcttacaatctgagataaatccagcactcctc
tcttcccctgtccctcaaaaacgttcaatttcatcgccaggctggcgcagaggctctgtg
acgccccgggtcaccgccatcccatgcccgggctgccagcatgacattgatctgggcgaa
cgcggcatcagcatgttgttccgcaacttcaccctggagagtatcgtggagcgctacaga
caagccgcgcgtgcagctgtggcgatcatgtgcaacatctgtaaacctccaaaccagcag
gaagcgacgaagagctgcatggattgcaaagctagctactgcaatgagtgcttcaaactc
caccatccctggggcacgcccaaagcccagcatgagtatgttggtcccaccacaaatttt
aggccaaaggtactaatgtgcccagagcatgagatggagaaggtcaacatgtactgtgaa
gtctgcagacggccggtgtgtcacttgtgcaaactgggaggctcccatgccaaccacaaa
gtcacttcaatgagtagtgcttacaagatcctaaaggagaagctagccaagagtatccat
tacctcatcagtaaagaagaccaggtcaggactcagattactgagcttgatcggctcatc
aatcagaccgaggaaaatggacaggttgcagagcgacaagccaatgagcactttgaacgc
ttgtttgagacccttcaagaaagaaaatctgagatgctaagatccattgaacagtcccgg
aaccgacgcatagaccagctgaaaggccaggtggaagagtacaggggcatgttggagaac
agtggtttggtcggctacgcccaggaggtgctgaaagagacggatcagtcctgctttgtc
caaactgcaaaacagctgcatgtcaggattcaaaaagccacagagtcactgaagaccttc
catccctcagctgacccttgctttgatgagtttgtgctggacacatctaaagaggagacc
ctgctgaaagagatgtgttttggtggagttccagatcctcctctgattgacttctcccaa
agcagagtttataacgaggcgtcgatctgctggaggctgccagatgaccatctaccaacc
gatcaccatgttctcgagtaccgcaaacttggtggaccaagccagcccccatcccatgag
gatactgaggacggttgtgtctggagggctacagacagggtgtatggatccagtgctgtg
gtgcaagacctgcagccagacagtcgatacgccttcagagttcgaagctgcagaaactcc
atgtttagcccgtacagcccagaggtctcctttcacactccacctgctcctgtttttagc
ttcctgttcagcgataagtgtggatttagcactgagcgcctcatcctgaacaatcgacga
gacacggtggagagcgtggcaggcatggctttcctccttgcagcagaacgagtgcaaatg
ggcagctacctgggtctggattacatcattggggacaccggcatctctcaggggagacac
tactgggcctttaaggtggagccttactcttacatggttaaggtgggcgtagcttctgac
accaagctgattgaatggttccacaatccaagagacaccagcagcccaaggtatgaccat
gacagcgggcatgacagtggcagcgaggacgcatgctacgagctctcccagcccttcacc
ctcatcaccctgggcatgggcaaactcttcatccccaaggcctcttcttcctcctctgtt
tccaatgcaaacgtatcatctggcgacccaggcaatcgagtcctccccatgccgcagcgc
ttgggtatatgcttggactatgatgcgcatcgggtgtatttttatgacgcagacaccatg
aggtgcctttttgagaggcaggtcgactgttcgggaacgatgtttccagcctttggtctc
atgggcagcgggaaggtccagcttgaggagttcatcactgctaagaaactgaccttctga
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integrated database retrieval system
