Cyprinodon variegatus (sheepshead minnow): 107084467
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Entry
107084467 CDS
T06110
Name
(RefSeq) glutamate receptor ionotropic, kainate 5-like
KO
K05205
glutamate receptor, ionotropic kainate 5
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04080
Neuroactive ligand-receptor interaction
cvg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107084467
04082 Neuroactive ligand signaling
107084467
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107084467
Ion channels [BR:
cvg04040
]
Ligand-gated channels
Glutamate (ionotropic)
107084467
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
T6SS-SciN
Motif
Other DBs
NCBI-GeneID:
107084467
NCBI-ProteinID:
XP_015229839
Ensembl:
ENSCVAG00000005201
LinkDB
All DBs
Position
Unknown
AA seq
1105 aa
AA seq
DB search
MQALPALLLSIYVVVLLLTMAPHLFSKANTLSAVRMAAILDDQSLCGRGERLALALAREN
INNQMEGSSQARVEVDVYELQKDSQYETTDTMCQILPKGVVSVIGPASSPASGSTISHIC
GEKEIPHVKIGPEETPKLPYLRFASVTLYPSNEDLSLAIGSILRSFGYPTASLICAKAEC
LLRLEELVRQFLISRETLSVRMLDDSLDPTPLLKEIRDDKVATIIIDANASISYHILRKA
NELGMMSAFYKYILTTMDFPLLQLDDVVGDQSNIVGFSMLNISHPFYLEFIRSLNLSWKE
GCNINPYPGPALSSALMFDAVHVVVSAVRELNRSQEIGVKPLSCTSPLIWQHGTSLMNYL
RMVEYDGLTGHIEFNSKGQRTNYTLKILEKHPAGHKEIGTWFSNNTLAMNSTSLDLNASE
TLANKSLIVTTILENPYVMRKSNYQDLHGNDQYEGFCVDMLRELADILKFSFKIKLVDDG
LYGAPEPNGSWTGMVGELINRKADLAVAGFTITSEREKVIDFSKPFMSLGISILYRVHLA
RKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRERRDILENQY
TLGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEV
PIESPDDLADQTNIQYGTIHGGSTMTFFMNSRYQTYQRMWNYMKSKQPSVFVKSTEEGIA
RVLNSKYAFLMESTMNEYYRSLNCNLTQIGGLLDTKGYGIGMPLGSPYRDEITLGILQLQ
ESNRLEILKRRWWEGGQCPKEEDHRAKGLGMENIGGIFVVLICGLIVAVFVAIMEFVWST
RRTAETGKVSVCQEMLTEFRNAVSCKKSSRARRRRPLSSAGGGVLRHPSRLALAGPRPIR
LVREMRLSNGKLYSGAGPLTGGLAGLGGGMAAGPDLGPGPQRLLDDPLGANSATNTPPPP
PPVSSFEAPPAPPRTFLQSCSHVRICQECRRIQSLRPAALTPPPPPPPSSSSSASSCSRI
PPLAMSGHQHRHNPHHHLHYHHGSMSLPRLPPPPPPISTDRADSDGGTASPQRGKNRPAP
PPRPLPPPKTPTLPPTNYLGGHDCA
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctctgccagcactgctgctgtcgatttatgtcgtcgtcctgctgctgactatg
gcacctcatctcttcagcaaagccaacaccctatccgccgtccgaatggcggccattttg
gatgaccagtctttgtgtggccgcggtgagcgcctggcgctggctctggccagggaaaat
attaacaatcagatggagggttcctcccaggcaagggtagaggtggatgtctacgagcta
cagaaagattcccaatatgagacgactgacacaatgtgtcagatcctgcctaagggtgtg
gtatcagtgattggccctgcctctagcccggcctcagggtcaaccatcagtcacatctgc
ggggaaaaagagatccctcatgtgaagatcgggcctgaggaaaccccaaagctaccgtac
ctgcgcttcgcctcggtgacactgtatccgagtaacgaggacctcagcctggccatcgga
tccatcctgcgctcctttggctacccaacagccagcctcatttgtgctaaagcagagtgc
ctgctcagattagaggaacttgttcgacagttccttatctccagagagacgctttcagtg
cgaatgctggatgacagtctggaccccacgcccttgctgaaggagattcgtgatgacaaa
gtggctaccatcattattgatgctaatgcctctatttcttaccatatcctcaggaaggct
aacgagctggggatgatgtcggccttctacaagtatattctcaccaccatggatttccct
ctgctccaactagatgatgtggtgggtgaccagtccaacattgttggcttctctatgttg
aacatttcccatcctttctacttggagttcatcaggagcctaaacttgtcatggaaggaa
ggctgcaacatcaacccatatccaggacctgcgctgtcatcagcccttatgtttgatgct
gttcacgtggtggtgagtgctgtgcgggagctgaaccgcagtcaggagattggagtgaag
ccgctgagctgcacctcccccctcatctggcaacatgggaccagcctcatgaactacctt
cgcatggtggaatatgatggtctgacaggtcacatcgagttcaacagcaaaggacagagg
accaactacaccctgaagatcttggagaaacaccctgcaggccataaagagattggtact
tggttttccaacaacacattggccatgaactctacttccttggacctcaatgcctcggaa
acattggctaacaaatccttaattgtcaccactatactggaaaacccgtatgtgatgcgc
aagtccaattaccaggaccttcacggaaacgatcagtacgagggtttttgtgtggacatg
ctgagagagttggcagatattctaaagttttcctttaagataaagctggtggatgatggg
ttgtatggagcacctgagcctaatggcagctggaccggcatggtcggggagcttatcaac
aggaaagcagacctggcagtggctggcttcactataacctcagagagagagaaggtgatt
gatttctccaagccattcatgtccctgggaatcagcatcctctaccgagtgcatctggct
cgtaaaccaggttacttttcttttctggacccgttttctcctgctgtttggcttttcatg
ctgttggcctacctcgccgtcagctgtgttctctttcttgctgccaggctcagcccttat
gagtggtacaaccctcatccatgtctacgggagcgacgggacatcttggagaaccagtac
acactgggcaacagtctgtggtttccagttggaggcttcatgcagcaaggctcggagatc
atgccccgtgccctgtccacccgctgtgttagcggagtctggtgggcgttcactctcatc
ataatctcctcctatactgccaacttggcagcgtttctcaccgtacagagaatggaggtg
cccattgagtctcctgatgacctggccgaccaaaccaacatacaatatggaaccatacat
ggaggatccacaatgacgttctttatgaactcacggtaccagacataccagcgaatgtgg
aattacatgaagtccaagcagcccagtgtttttgtgaagagcacagaagagggcattgcc
cgtgtacttaattcaaagtatgccttcctgatggagagcaccatgaacgagtactaccgc
agcctaaactgcaacctcacgcagatcggaggccttttggacacaaagggatatggcatt
ggcatgccgctgggctctccttacagagatgaaatcactctggggatcttgcagctgcag
gaaagcaacaggctggagattctaaagagacgctggtgggaaggaggacagtgtcctaag
gaggaggatcaccgggctaaaggcctcggcatggagaatattggtgggatctttgtagtc
ttgatttgtggcctcattgtagctgtgttcgtggccatcatggagtttgtttggtcaacc
cgccgcacagctgagacaggcaaggtctctgtttgtcaggagatgctgacagagtttcga
aatgctgtttcttgtaagaaaagttcccgggctcgtcggcgacgccctctcagcagtgct
gggggcggagttctgcgccatccttcccggctagctctagctgggcctagaccaattcgg
ctagtaagggagatgcgtctcagtaacggaaaactctacagtggtgccggcccactgaca
gggggtttggctgggctggggggaggtatggcagcaggacctgatttgggcccaggccca
cagaggctcttggatgatccactgggtgccaactctgccaccaatacacctcctccgcca
cctcctgtgtcatcatttgaggctccgcctgccccacctcgcaccttcctccagagctgc
agccatgtgcgcatctgccaggagtgccggcggatccaaagcttgcgaccggccgcactc
acgcctcccccacctcctccaccttcttcatcctcctctgcctcgtcctgctcccgtatc
cctcctttggcaatgtcaggacatcaacatcgtcataatccgcaccaccacctccactac
caccatggctccatgtcattaccccgccttcctcctcctcctcccccaatctcaacagac
agagccgatagtgatgggggaacagcaagtccacagcgggggaaaaacagaccggcccct
cctcccaggccgctgccgcctcccaaaacaccaacactcccaccaacaaattatctcggg
ggtcacgattgtgcttaa
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